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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 2
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome, plastid, secretory
BaCelLo:cytosol
MultiLoc:peroxisome
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400085620 Potato endoplasmic reticulum, plasma membrane, vacuole 57.68 88.39
PGSC0003DMT400089827 Potato endoplasmic reticulum, golgi 74.74 86.59
Solyc10g081890.1.1 Tomato nucleus 49.68 49.37
VIT_08s0105g00250.t01 Wine grape cytosol, golgi, plasma membrane 42.74 41.86
CDY52054 Canola cytosol, peroxisome, plasma membrane 37.47 41.01
KRH68006 Soybean golgi, peroxisome, plasma membrane 41.68 40.74
KRG96263 Soybean nucleus 40.63 39.96
GSMUA_Achr8P30390_001 Banana cytosol, endoplasmic reticulum, plasma membrane 35.16 39.86
Bra038672.1-P Field mustard plasma membrane 40.84 39.59
GSMUA_Achr6P35650_001 Banana plastid 37.68 39.51
CDY08504 Canola cytosol, golgi, plasma membrane 40.63 39.47
Solyc01g007090.1.1 Tomato cytosol 51.58 39.39
Bra034819.1-P Field mustard cytosol, golgi, plasma membrane 40.63 39.39
AT3G11680.2 Thale cress plasma membrane 40.63 39.39
CDY01048 Canola cytosol, golgi, plasma membrane 40.42 39.34
Solyc11g068970.1.1 Tomato cytosol, peroxisome, plasma membrane 37.68 38.33
Solyc11g071350.1.1 Tomato nucleus 35.37 37.5
Solyc06g074100.1.1 Tomato plasma membrane 35.79 36.4
KXG26278 Sorghum cytosol, peroxisome, plasma membrane 34.11 36.32
Os04t0417000-01 Rice cytosol, plastid, vacuole 34.53 36.04
TraesCS2A01G297900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 31.16 35.58
OQU81544 Sorghum peroxisome 33.68 35.56
TraesCS2B01G314100.1 Wheat plasma membrane 33.89 35.54
OQU81543 Sorghum cytosol, peroxisome, plasma membrane 31.79 35.36
Zm00001d025373_P001 Maize cytosol, peroxisome, plasma membrane 32.63 35.31
Solyc08g082950.2.1 Tomato plasma membrane 35.16 35.08
Zm00001d003749_P001 Maize plasma membrane 33.89 34.7
TraesCS4D01G283600.1 Wheat plasma membrane 33.68 34.33
HORVU2Hr1G073840.3 Barley peroxisome, plasma membrane 33.89 33.89
TraesCS2D01G295900.1 Wheat plasma membrane 33.89 33.26
Solyc01g096140.2.1 Tomato cytosol, peroxisome, plasma membrane 33.89 32.33
OQU75600 Sorghum cytosol 13.47 31.22
Solyc09g065070.1.1 Tomato peroxisome 27.58 30.25
Solyc08g006990.1.1 Tomato cytosol, peroxisome, plasma membrane 28.63 25.56
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 8.63 25.0
Solyc06g061100.2.1 Tomato plasma membrane 26.53 24.14
Solyc05g009580.2.1 Tomato cytosol 25.89 22.78
Solyc05g009590.2.1 Tomato plasma membrane 24.42 22.14
Solyc03g096820.2.1 Tomato golgi, peroxisome, plasma membrane, plastid 24.84 20.67
Solyc03g119640.2.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 24.21 18.88
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 14.53 17.88
Protein Annotations
MapMan:24.3.11InterPro:ALMTGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0006810GO:GO:0008150GO:GO:0009705
GO:GO:0015140GO:GO:0015743GO:GO:0016020GO:GO:0016021GO:GO:0071423UniProt:K4ASS4
PFAM:PF11744PANTHER:PTHR31086PANTHER:PTHR31086:SF3EnsemblPlantsGene:Solyc01g007080.2EnsemblPlants:Solyc01g007080.2.1TMHMM:TMhelix
UniParc:UPI00027626F0SEG:seg::::
Description
No Description!
Coordinates
chr1:-:1629115..1634158
Molecular Weight (calculated)
52762.2 Da
IEP (calculated)
8.519
GRAVY (calculated)
0.048
Length
475 amino acids
Sequence
(BLAST)
001: MDIDSKIQEK NSVLNMLWNQ LKWFPMKLIN KINNIANNTI NIGKNDPRKI WHASKVGLSL TLVILFYYSW PLYHSFEQSA IMAVLTVMVA FEYTAGATIS
101: KCLNIAFATA LGVSLGIGAK YLAEICGKEG EPIILGFLVF ILGALGTFTR FYPHMQRRYD YGCMFSVATF SLVTVSGDRY LEMVKYRIST IMVSVATVMV
201: ISLVIRPVWA GKDLHNLIIA NLEKLASFLD GFESEYFQAI GEGSKDKEKG FLEAFKSVLG SKATEESLAN FAWWEPANGP FRFNNPGKEY LKIGNLGRDC
301: ACHLHALSGH LKSKSMAPTE FHKRTEEGCK SIIKKSSNAL KYLALSIKTR TQPGPYNAKF AIDELRAALL ITTKTISEED TIDVVSVASI LIDVTRCVDE
401: ISKAVGELSI KAHFQKEKKK KDNSPSAPQL QLPNRVIVNA AAAVAEEENP IGLIKGEHVV CEIHAIDEEI NIKFT
Best Arabidopsis Sequence Match ( AT1G08440.1 )
(BLAST)
001: MEKVREIVRE GRRVGKEDPR RVVHAFKVGL ALALVSSFYY YQPLYDNFGV NAMWAVMTVV VVFEFSVGAT LGKGLNRAVA TLVAGGLGIG AHHLASLSGP
101: TVEPILLAIF VFVLAALSTF VRFFPRVKAR YDYGVLIFIL TFALISVSGF REDEILDLAH KRLSTVIMGG VSCVLISIFV CPVWAGQDLH SLLASNFDTL
201: SHFLQEFGDE YFEATEDGDI KEVEKRRRNL ERYKSVLNSK SNEEALANFA KWEPRHGQFR FRHPWRQYLA VGALLRQSAY RIDALNSNIN SDMQIPMDIK
301: KKIEEPLRRM SSESGKSMKE VSISLKNMTI SSSFDIHVVN SQSACKTLST LLKSGILNDV EPLQMISLMT TVSLLIDIVN LTEKISESVH ELASAAKFKN
401: KKKPSKSNSG SIGQAMPNKS HDDDDHVVTI LGDVDTSNNV DQSQSHGEIS VDSCHHVTIK INDDDSIHDK NEDGDIHVHT NRVSCDHTNA SDLLDSGVKK
501: N
Arabidopsis Description
ALMT2Aluminum-activated malate transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE8]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.