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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU81543 Sorghum cytosol, peroxisome, plasma membrane 98.54 47.31
OQU81544 Sorghum peroxisome 100.0 45.56
TraesCS2B01G314100.1 Wheat plasma membrane 67.32 30.46
KXG26278 Sorghum cytosol, peroxisome, plasma membrane 65.37 30.04
TraesCS2A01G297900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 58.54 28.85
HORVU2Hr1G073840.3 Barley peroxisome, plasma membrane 66.83 28.84
Os04t0417000-01 Rice cytosol, plastid, vacuole 63.9 28.79
TraesCS2D01G295900.1 Wheat plasma membrane 67.8 28.72
TraesCS4D01G283600.1 Wheat plasma membrane 60.0 26.39
VIT_06s0080g00200.t01 Wine grape plasma membrane 31.71 22.97
GSMUA_Achr8P30390_001 Banana cytosol, endoplasmic reticulum, plasma membrane 44.88 21.96
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 34.15 21.81
GSMUA_Achr6P35650_001 Banana plastid 47.32 21.41
PGSC0003DMT400072326 Potato golgi 35.61 17.94
VIT_06s0009g00450.t01 Wine grape plasma membrane 40.49 17.33
KRH26686 Soybean golgi, peroxisome, plasma membrane 36.59 17.24
PGSC0003DMT400050498 Potato cytosol, peroxisome, plasma membrane 36.59 17.16
VIT_06s0080g00170.t01 Wine grape golgi, peroxisome, plasma membrane 40.98 16.6
VIT_06s0009g00480.t01 Wine grape golgi, peroxisome, plasma membrane 40.0 16.5
KRH25315 Soybean plasma membrane 38.05 16.22
KRH30357 Soybean plasma membrane 37.56 15.94
VIT_08s0105g00250.t01 Wine grape cytosol, golgi, plasma membrane 37.56 15.88
KRH26685 Soybean plasma membrane 34.15 15.66
CDX97483 Canola plasma membrane 36.1 15.64
Solyc11g068970.1.1 Tomato cytosol, peroxisome, plasma membrane 35.61 15.63
PGSC0003DMT400089827 Potato endoplasmic reticulum, golgi 31.22 15.61
KRH68006 Soybean golgi, peroxisome, plasma membrane 35.12 14.81
Solyc06g074100.1.1 Tomato plasma membrane 33.66 14.78
PGSC0003DMT400047767 Potato plasma membrane 30.73 14.75
Solyc10g081890.1.1 Tomato nucleus 34.15 14.64
CDY31147 Canola plasma membrane 35.12 14.6
Bra030725.1-P Field mustard plasma membrane 34.63 14.43
Solyc11g071350.1.1 Tomato nucleus 31.22 14.29
KRG96263 Soybean nucleus 33.66 14.29
Bra030726.1-P Field mustard cytosol, golgi, plasma membrane 34.15 14.06
CDY31146 Canola cytosol, golgi, plasma membrane 34.15 14.06
CDY52054 Canola cytosol, peroxisome, plasma membrane 29.76 14.06
PGSC0003DMT400085620 Potato endoplasmic reticulum, plasma membrane, vacuole 20.98 13.87
CDX95060 Canola cytosol, golgi, plasma membrane 34.15 13.78
CDX93562 Canola cytosol, golgi, plasma membrane 34.15 13.78
Bra018625.1-P Field mustard cytosol, golgi, plasma membrane 34.15 13.78
CDX97489 Canola cytosol, golgi, plasma membrane 33.66 13.61
AT1G08430.1 Thale cress golgi 32.68 13.59
AT1G08440.1 Thale cress cytosol, golgi, plasma membrane 33.17 13.57
Solyc01g007080.2.1 Tomato peroxisome 31.22 13.47
AT2G27240.1 Thale cress golgi 33.17 13.44
Bra034339.1-P Field mustard golgi 31.71 13.21
CDY30563 Canola plasma membrane 32.2 12.92
CDX77103 Canola golgi 32.2 12.92
AT3G11680.2 Thale cress plasma membrane 30.24 12.65
CDY08504 Canola cytosol, golgi, plasma membrane 29.76 12.47
Bra034819.1-P Field mustard cytosol, golgi, plasma membrane 29.76 12.45
Bra038672.1-P Field mustard plasma membrane 29.76 12.45
CDY01048 Canola cytosol, golgi, plasma membrane 29.27 12.3
EES05741 Sorghum cytosol 29.76 12.2
EES12682 Sorghum cytosol 29.27 12.17
CDX97487 Canola plasma membrane 20.98 11.14
PGSC0003DMT400087967 Potato cytosol 32.2 9.92
Solyc01g007090.1.1 Tomato cytosol 29.76 9.81
EER89808 Sorghum cytosol, endoplasmic reticulum, peroxisome, plastid 31.71 9.66
PGSC0003DMT400086999 Potato cytosol, endoplasmic reticulum, plasma membrane 31.22 9.62
EER90182 Sorghum mitochondrion 24.39 9.45
OQU85465 Sorghum golgi 22.93 9.07
EER89585 Sorghum plastid 22.44 7.47
CDX97484 Canola plasma membrane 0.0 0.0
CDX97488 Canola endoplasmic reticulum 0.0 0.0
Protein Annotations
MapMan:35.1EntrezGene:8155665InterPro:ALMTUniProt:C6JSN9ProteinID:EES20342.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773
GO:GO:0006810GO:GO:0008150GO:GO:0009705GO:GO:0015140GO:GO:0015743GO:GO:0016020
GO:GO:0071423ProteinID:KXG18668.1EnsemblPlants:OQU75600ProteinID:OQU75600ProteinID:OQU75600.1PFAM:PF11744
PANTHER:PTHR31086PANTHER:PTHR31086:SF8EnsemblPlantsGene:SORBI_3K016500UniParc:UPI0001AFF6EDRefSeq:XP_002488924.1:
Description
hypothetical protein
Coordinates
chrsuper_1717:-:2776..3636
Molecular Weight (calculated)
22637.4 Da
IEP (calculated)
8.328
GRAVY (calculated)
-0.112
Length
205 amino acids
Sequence
(BLAST)
001: MESECFRENS PCENLEGKAF LQVYKGVLNS KVREDSLCTF AKWEPIHGKF RFRHPWGQYQ KLGALCRQCA SSMEALASCV VVLKKSQYPE ANPELCLKLR
101: ATCGAMSLHS AKALRGLSLA VRTMTLPCQT NDMSTAAKVA SDFRTQLSED AALLQVMHGA VVASLLSDVV IQIERITEST SKLARLARFT NPERPPSAVV
201: INVED
Best Arabidopsis Sequence Match ( AT2G27240.2 )
(BLAST)
001: MEKVREIVRE GRRVAKEDPR RVVHSFKVGL VLALVSSFYY YQPLYDSFGV NAMWAVMTVV VVFEFSVGAT LGKGLNRVAA TLFAGGLGIG AHHLASMSGP
101: TGEPILLAVF VFVQAALSTF VRFFPRVKAR YDYSLLIFIL TFALISVSGF REEQVVKLTH KRISTVIIGG LSCVIISIFV CPVWAGQDLH SLIASNFEKL
201: SFFLLDFGDK YCEVVENDGA KEVDKRKKDF DNYKSVLNSK SNEESLANFA KWEPGHGQFR FRHPWKQYLA VGELIRQCAY RIHALNSYLN ADNQVSVDIK
301: KKLGEPLRRM SLESGKAMKE MSISLKKMTK PSSSDLHVQN AKSACKSLTN LLNSGILKEV EPLELVSLLT AISLLIDIIN LTEKILESLH ELATAAKFKN
401: KIEHPLFSEK PKAKSFVSVR SIKCHDDHVV IIIEDDGNND DTSKNDNGSK EVSIHEKHED DDTHVDARCV SCGHTSVCVK
Arabidopsis Description
ALMT7Aluminum-activated malate transporter 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIN1]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.