Factsheet for VIT_06s0080g00170.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

cytosol 1
golgi 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0009g00480.t01	Wine grape	golgi, peroxisome, plasma membrane	74.11	75.45
VIT_06s0009g00450.t01	Wine grape	plasma membrane	55.73	58.87
VIT_06s0080g00200.t01	Wine grape	plasma membrane	31.03	55.48
VIT_08s0105g00250.t01	Wine grape	cytosol, golgi, plasma membrane	51.38	53.61
KRH26686	Soybean	golgi, peroxisome, plasma membrane	45.85	53.33
GSMUA_Achr6P35650_001	Banana	plastid	45.06	50.33
Solyc06g074100.1.1	Tomato	plasma membrane	45.06	48.82
GSMUA_Achr8P30390_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	40.32	48.69
PGSC0003DMT400047767	Potato	plasma membrane	40.32	47.78
Os04t0417000-01	Rice	cytosol, plastid, vacuole	42.89	47.69
KXG26278	Sorghum	cytosol, peroxisome, plasma membrane	41.5	47.09
TraesCS2B01G314100.1	Wheat	plasma membrane	41.9	46.8
Solyc11g071350.1.1	Tomato	nucleus	40.91	46.21
TraesCS2A01G297900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	37.55	45.67
Zm00001d025373_P001	Maize	cytosol, peroxisome, plasma membrane	39.33	45.33
Zm00001d003749_P001	Maize	plasma membrane	41.11	44.83
OQU81544	Sorghum	peroxisome	39.72	44.67
TraesCS2D01G295900.1	Wheat	plasma membrane	41.9	43.8
HORVU2Hr1G073840.3	Barley	peroxisome, plasma membrane	41.11	43.79
OQU81543	Sorghum	cytosol, peroxisome, plasma membrane	36.76	43.56
VIT_02s0025g02320.t01	Wine grape	cytosol	24.31	43.16
TraesCS4D01G283600.1	Wheat	plasma membrane	39.33	42.7
OQU75600	Sorghum	cytosol	16.6	40.98
VIT_15s0046g00130.t01	Wine grape	plasma membrane	37.94	38.87
VIT_07s0104g00100.t01	Wine grape	plastid	28.26	34.05
VIT_02s0025g00700.t01	Wine grape	plasma membrane	26.88	27.25
VIT_17s0000g03850.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	30.04	25.85
VIT_18s0122g00020.t01	Wine grape	endoplasmic reticulum, extracellular	10.47	25.0
VIT_02s0012g01030.t01	Wine grape	plasma membrane	31.82	21.85
VIT_01s0011g03290.t01	Wine grape	plasma membrane	28.85	12.93

Protein Annotations

EntrezGene:100266673	wikigene:100266673	MapMan:24.3.11	InterPro:ALMT	EMBL:AM482456	ProteinID:CAN81826
ProteinID:CAN81826.1	ProteinID:CBI28348	ProteinID:CBI28348.3	ncoils:Coil	UniProt:D7TCX5	EMBL:FN595757
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0006810	GO:GO:0008150	GO:GO:0009705	GO:GO:0015140	GO:GO:0015743
GO:GO:0016020	GO:GO:0016021	GO:GO:0071423	EntrezGene:LOC100266673	wikigene:LOC100266673	PFAM:PF11744
PANTHER:PTHR31086	PANTHER:PTHR31086:SF8	TMHMM:TMhelix	UniParc:UPI00015CE6E7	ArrayExpress:VIT_06s0080g00170	EnsemblPlantsGene:VIT_06s0080g00170
EnsemblPlants:VIT_06s0080g00170.t01	RefSeq:XP_002262763	RefSeq:XP_002262763.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6:+:19947559..19949838

Molecular Weight (calculated)

56010.6 Da

IEP (calculated)

7.672

GRAVY (calculated)

-0.044

Length

506 amino acids

Sequence
(BLAST)

001: MESVDRERAG LIARGWRWPW GLIEKFRDKV VEAARKAKKL GQEDPRRIIH SLKVGLAITL VSLMYYFNPA YGDFGVSTMW AVLTVVVVFE FSVGATLGRG
101: LNRGLATLLA GALAVGAHYL AHLPGRPAQP IILGIFVFLV AAALSFLRFF PKLKARYDYA LVIFILTFSL VSVTGYRDEE VLELAQQRLS TVLIGCATAM
201: LVSIGICPVW AGYDLHKLVA GNVEKLGNFL EGFSEEYDRV LDDGESKDNK TFLQGYKSIL TSKNTEDSLA NFARWEPGHG RFRFRHPWKQ YQKIGSLAGQ
301: CAYRIEALSS YPHSHIQAPT EIQSKIQAAC TNMSTESGKA LKELASAIKS MTKPCSVDPH IVNSKIAAES LKSLLETHFC EDVDLLELMP TAVVGSLLVE
401: VITYVEEIAE SVHELSSLAH FKDAKPEPEP EPEPEAEPKP TLEQPQQLQQ TIQKFSRMDG PHHIITISGS LSIKASGTVV NVTSTDVTKG SKTKSNERQM
501: RHVFSF

Best Arabidopsis Sequence Match ( AT1G08440.1 )
(BLAST)

001: MEKVREIVRE GRRVGKEDPR RVVHAFKVGL ALALVSSFYY YQPLYDNFGV NAMWAVMTVV VVFEFSVGAT LGKGLNRAVA TLVAGGLGIG AHHLASLSGP
101: TVEPILLAIF VFVLAALSTF VRFFPRVKAR YDYGVLIFIL TFALISVSGF REDEILDLAH KRLSTVIMGG VSCVLISIFV CPVWAGQDLH SLLASNFDTL
201: SHFLQEFGDE YFEATEDGDI KEVEKRRRNL ERYKSVLNSK SNEEALANFA KWEPRHGQFR FRHPWRQYLA VGALLRQSAY RIDALNSNIN SDMQIPMDIK
301: KKIEEPLRRM SSESGKSMKE VSISLKNMTI SSSFDIHVVN SQSACKTLST LLKSGILNDV EPLQMISLMT TVSLLIDIVN LTEKISESVH ELASAAKFKN
401: KKKPSKSNSG SIGQAMPNKS HDDDDHVVTI LGDVDTSNNV DQSQSHGEIS VDSCHHVTIK INDDDSIHDK NEDGDIHVHT NRVSCDHTNA SDLLDSGVKK
501: N

Arabidopsis Description

ALMT2Aluminum-activated malate transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE8]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.