Factsheet for VIT_06s0009g00480.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

cytosol 1
golgi 2
peroxisome 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	golgi
Plant-mPloc:	peroxisome, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_06s0080g00170.t01	Wine grape	golgi, peroxisome, plasma membrane	75.45	74.11
VIT_06s0009g00450.t01	Wine grape	plasma membrane	56.54	58.66
VIT_08s0105g00250.t01	Wine grape	cytosol, golgi, plasma membrane	53.12	54.43
KRH26686	Soybean	golgi, peroxisome, plasma membrane	46.88	53.56
VIT_06s0080g00200.t01	Wine grape	plasma membrane	30.38	53.36
GSMUA_Achr6P35650_001	Banana	plastid	45.07	49.45
GSMUA_Achr8P30390_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	40.64	48.21
Os04t0417000-01	Rice	cytosol, plastid, vacuole	43.06	47.03
TraesCS2B01G314100.1	Wheat	plasma membrane	42.86	47.02
Solyc06g074100.1.1	Tomato	plasma membrane	43.66	46.47
TraesCS2A01G297900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	38.83	46.39
PGSC0003DMT400047767	Potato	plasma membrane	39.64	46.14
KXG26278	Sorghum	cytosol, peroxisome, plasma membrane	41.05	45.74
Zm00001d025373_P001	Maize	cytosol, peroxisome, plasma membrane	39.44	44.65
Zm00001d003749_P001	Maize	plasma membrane	41.65	44.61
HORVU2Hr1G073840.3	Barley	peroxisome, plasma membrane	42.25	44.21
Solyc11g071350.1.1	Tomato	nucleus	39.84	44.2
TraesCS2D01G295900.1	Wheat	plasma membrane	42.86	44.01
OQU81544	Sorghum	peroxisome	39.44	43.56
OQU81543	Sorghum	cytosol, peroxisome, plasma membrane	37.02	43.09
VIT_02s0025g02320.t01	Wine grape	cytosol	24.35	42.46
TraesCS4D01G283600.1	Wheat	plasma membrane	39.03	41.63
OQU75600	Sorghum	cytosol	16.5	40.0
VIT_15s0046g00130.t01	Wine grape	plasma membrane	38.43	38.66
VIT_07s0104g00100.t01	Wine grape	plastid	30.58	36.19
VIT_02s0025g00700.t01	Wine grape	plasma membrane	26.56	26.45
VIT_18s0122g00020.t01	Wine grape	endoplasmic reticulum, extracellular	11.07	25.94
VIT_17s0000g03850.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	29.78	25.17
VIT_02s0012g01030.t01	Wine grape	plasma membrane	31.99	21.57
VIT_01s0011g03290.t01	Wine grape	plasma membrane	29.18	12.84

Protein Annotations

EntrezGene:100246094	wikigene:100246094	MapMan:24.3.11	InterPro:ALMT	EMBL:AM458031	ProteinID:CAN72306
ProteinID:CAN72306.1	ProteinID:CCB49201	ProteinID:CCB49201.1	UniProt:F6HAC2	EMBL:FN595504	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773
GO:GO:0006810	GO:GO:0008150	GO:GO:0009705	GO:GO:0015140	GO:GO:0015743	GO:GO:0016020
GO:GO:0016021	GO:GO:0071423	EntrezGene:LOC100246094	wikigene:LOC100246094	PFAM:PF11744	PANTHER:PTHR31086
PANTHER:PTHR31086:SF8	TMHMM:TMhelix	UniParc:UPI000210A9E8	ArrayExpress:VIT_06s0009g00480	EnsemblPlantsGene:VIT_06s0009g00480	EnsemblPlants:VIT_06s0009g00480.t01
RefSeq:XP_002274847	RefSeq:XP_002274847.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6:+:11065726..11067846

Molecular Weight (calculated)

55197.4 Da

IEP (calculated)

9.701

GRAVY (calculated)

0.028

Length

497 amino acids

Sequence
(BLAST)

001: MSSVDHERAG FIGRGWKWLK GSIVKCRDKV VEVARKTKKL GQDDPRRIIH SLKAGLAVSL VSLLYYFKPL YGGFGVSTMW AVLTVVVVFE FSVGATLGRG
101: LNRGLATMLA GALGVGAHYL ANLPGRTAQP ILLVLFVFLL AVSFVRFFPK MKARYDYGLL IFMLTFCLVS ITGYQDKEVL DLAHKRLSTI LIGSFTAVFV
201: SICICPVWAG DDLHKLVSGN VEKLGNFLEG EYFKVPGDGE SRDNKTFLQG YRSILTSKNS EDSLTNFARW EPRHGRFRFR HPWKQYQKIG SLTRQCAYHI
301: EALRIYPYPD IQAPAEIQRQ IQDACTEMST ESGKALKELA SAIKSMTKPS SVNTHIVNSK TAAKVLKFLL KTSSCEDFVL LEVMPTAMVA AQLVEVVTCV
401: EKIAESVHEL ASLAHFKDAK PEQKPALGQP QQLQQTMQQF SGIEGPHHII TINGSSAVLP EVSIQECGTV VHVTNTDIIK GSKAKTNVRE MRQYLSF

Best Arabidopsis Sequence Match ( AT1G08440.1 )
(BLAST)

001: MEKVREIVRE GRRVGKEDPR RVVHAFKVGL ALALVSSFYY YQPLYDNFGV NAMWAVMTVV VVFEFSVGAT LGKGLNRAVA TLVAGGLGIG AHHLASLSGP
101: TVEPILLAIF VFVLAALSTF VRFFPRVKAR YDYGVLIFIL TFALISVSGF REDEILDLAH KRLSTVIMGG VSCVLISIFV CPVWAGQDLH SLLASNFDTL
201: SHFLQEFGDE YFEATEDGDI KEVEKRRRNL ERYKSVLNSK SNEEALANFA KWEPRHGQFR FRHPWRQYLA VGALLRQSAY RIDALNSNIN SDMQIPMDIK
301: KKIEEPLRRM SSESGKSMKE VSISLKNMTI SSSFDIHVVN SQSACKTLST LLKSGILNDV EPLQMISLMT TVSLLIDIVN LTEKISESVH ELASAAKFKN
401: KKKPSKSNSG SIGQAMPNKS HDDDDHVVTI LGDVDTSNNV DQSQSHGEIS VDSCHHVTIK INDDDSIHDK NEDGDIHVHT NRVSCDHTNA SDLLDSGVKK
501: N

Arabidopsis Description

ALMT2Aluminum-activated malate transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE8]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.