Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0009g00450.t01 | Wine grape | plasma membrane | 55.83 | 32.99 |
| KRH26685 | Soybean | plasma membrane | 50.18 | 31.77 |
| OQU75600 | Sorghum | cytosol | 22.97 | 31.71 |
| VIT_06s0080g00170.t01 | Wine grape | golgi, peroxisome, plasma membrane | 55.48 | 31.03 |
| VIT_08s0105g00250.t01 | Wine grape | cytosol, golgi, plasma membrane | 52.3 | 30.52 |
| VIT_06s0009g00480.t01 | Wine grape | golgi, peroxisome, plasma membrane | 53.36 | 30.38 |
| PGSC0003DMT400047767 | Potato | plasma membrane | 44.17 | 29.27 |
| Solyc06g074100.1.1 | Tomato | plasma membrane | 46.64 | 28.27 |
| Solyc11g071350.1.1 | Tomato | nucleus | 43.82 | 27.68 |
| GSMUA_Achr8P30390_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 40.64 | 27.45 |
| GSMUA_Achr6P35650_001 | Banana | plastid | 41.34 | 25.83 |
| OQU81543 | Sorghum | cytosol, peroxisome, plasma membrane | 38.52 | 25.53 |
| KXG26278 | Sorghum | cytosol, peroxisome, plasma membrane | 39.58 | 25.11 |
| Os04t0417000-01 | Rice | cytosol, plastid, vacuole | 40.28 | 25.05 |
| TraesCS2B01G314100.1 | Wheat | plasma membrane | 39.93 | 24.94 |
| Zm00001d025373_P001 | Maize | cytosol, peroxisome, plasma membrane | 38.52 | 24.83 |
| Zm00001d003749_P001 | Maize | plasma membrane | 39.93 | 24.35 |
| OQU81544 | Sorghum | peroxisome | 38.16 | 24.0 |
| HORVU2Hr1G073840.3 | Barley | peroxisome, plasma membrane | 39.93 | 23.79 |
| TraesCS2D01G295900.1 | Wheat | plasma membrane | 39.93 | 23.35 |
| TraesCS2A01G297900.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 34.28 | 23.32 |
| VIT_15s0046g00130.t01 | Wine grape | plasma membrane | 40.28 | 23.08 |
| VIT_18s0122g00020.t01 | Wine grape | endoplasmic reticulum, extracellular | 16.96 | 22.64 |
| TraesCS4D01G283600.1 | Wheat | plasma membrane | 36.75 | 22.32 |
| VIT_07s0104g00100.t01 | Wine grape | plastid | 28.98 | 19.52 |
| VIT_02s0025g02320.t01 | Wine grape | cytosol | 18.73 | 18.6 |
| VIT_02s0025g00700.t01 | Wine grape | plasma membrane | 25.8 | 14.63 |
| VIT_17s0000g03850.t01 | Wine grape | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 30.04 | 14.46 |
| VIT_02s0012g01030.t01 | Wine grape | plasma membrane | 34.28 | 13.16 |
| VIT_01s0011g03290.t01 | Wine grape | plasma membrane | 30.74 | 7.71 |
Protein Annotations
| EntrezGene:100263978 | wikigene:100263978 | MapMan:24.3.11 | InterPro:ALMT | ProteinID:CBI28345 | ProteinID:CBI28345.3 |
| ncoils:Coil | UniProt:D7TCX2 | EMBL:FN595757 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015743 | GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100263978 | wikigene:LOC100263978 | PFAM:PF11744 |
| PANTHER:PTHR31086 | PANTHER:PTHR31086:SF22 | TMHMM:TMhelix | UniParc:UPI0001BE2EAD | ArrayExpress:VIT_06s0080g00200 | EnsemblPlantsGene:VIT_06s0080g00200 |
| EnsemblPlants:VIT_06s0080g00200.t01 | RefSeq:XP_003632294 | RefSeq:XP_003632294.1 | : | : | : |
Description
No Description!
Coordinates
chr6:+:19994940..19996136
Molecular Weight (calculated)
31330.1 Da
IEP (calculated)
5.416
GRAVY (calculated)
0.123
Length
283 amino acids
Sequence
(BLAST)
(BLAST)
001: MKARYDYGLI ILMLTFSMVS VSGYRDEDAL TIAYERLLTI IVGCVIALLV SILICPVWVG EDLQRLIAAN LEKLGSFLEG FSGAYCRISG DAQITIDQSF
101: LQGYKSVLTS KHSEETMVNL ARWEPGHGRF LFRHPWKQYL KVGTLARQCS YKIEILSGHL ASEIEAAQEI RGEIQESCRE MTRESGKALK ELAATIRTMT
201: RSTSMDFHIE NSKGAAKNLM SLLETGLLED STTLLEIIPA VAVASTVMDI VTCTERISDA VKELASLAHF KSTISPVVTP EEP
101: LQGYKSVLTS KHSEETMVNL ARWEPGHGRF LFRHPWKQYL KVGTLARQCS YKIEILSGHL ASEIEAAQEI RGEIQESCRE MTRESGKALK ELAATIRTMT
201: RSTSMDFHIE NSKGAAKNLM SLLETGLLED STTLLEIIPA VAVASTVMDI VTCTERISDA VKELASLAHF KSTISPVVTP EEP
001: MEKVREIVRE GIRVGNEDPR RIIHAFKVGL ALVLVSSFYY YQPFGPFTDY FGINAMWAVM TVVVVFEFSV GATLGKGLNR GVATLVAGGL GIGAHQLARL
101: SGATVEPILL VMLVFVQAAL STFVRFFPWV KTKFDYGILI FILTFALISL SGFRDEEIMD LAESRLSTVV IGGVSCILIS IFVCPVWAGQ DLHSLLASNF
201: DTLSHFLQDF GDEYFEAREK GDYKVVEKRK KNLERYKSVL DSKSDEEALA NYAEWEPPHG QFRFRHPWKQ YVAVGALLRQ CAYRIDALNS YINSDFQIPV
301: DIKKKLETPL RRMSSESGNS MKEMSISLKQ MIKSSSSDIH VSNSQAACKS LSTLLKSGIL NDVEPLQMIS LMTTVSMLID IVNLTEKISE SVHELASAAR
401: FKNKMRPTVL YEKSDSGSIG RAMPIDSHED HHVVTVLHDV DNDRSNNVDD SRGGSSQDSC HHVAIKIVDD NSNHEKHEDG EIHVHTLSNG HLQ
101: SGATVEPILL VMLVFVQAAL STFVRFFPWV KTKFDYGILI FILTFALISL SGFRDEEIMD LAESRLSTVV IGGVSCILIS IFVCPVWAGQ DLHSLLASNF
201: DTLSHFLQDF GDEYFEAREK GDYKVVEKRK KNLERYKSVL DSKSDEEALA NYAEWEPPHG QFRFRHPWKQ YVAVGALLRQ CAYRIDALNS YINSDFQIPV
301: DIKKKLETPL RRMSSESGNS MKEMSISLKQ MIKSSSSDIH VSNSQAACKS LSTLLKSGIL NDVEPLQMIS LMTTVSMLID IVNLTEKISE SVHELASAAR
401: FKNKMRPTVL YEKSDSGSIG RAMPIDSHED HHVVTVLHDV DNDRSNNVDD SRGGSSQDSC HHVAIKIVDD NSNHEKHEDG EIHVHTLSNG HLQ
Arabidopsis Description
ALMT1Aluminum-activated malate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE9]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.