Factsheet for VIT_02s0012g01030.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77215	Soybean	cytosol, peroxisome, plasma membrane	49.8	68.34
KRH28280	Soybean	peroxisome	49.8	68.34
Solyc08g006990.1.1	Tomato	cytosol, peroxisome, plasma membrane	48.3	66.92
PGSC0003DMT400052884	Potato	cytosol	48.58	66.54
KRH58213	Soybean	cytosol	46.4	65.14
KRH04321	Soybean	golgi	63.91	64.43
KRH04324	Soybean	cytosol	46.68	63.82
Solyc06g061100.2.1	Tomato	plasma membrane	44.78	63.22
CDY01507	Canola	cytosol	44.5	62.72
CDX90432	Canola	cytosol	44.64	62.67
PGSC0003DMT400005384	Potato	plasma membrane	56.45	62.37
KRG90599	Soybean	plasma membrane	40.71	60.48
Bra012627.1-P	Field mustard	cytosol	43.83	60.37
AT4G17970.1	Thale cress	cytosol	45.32	59.64
KRG90598	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	41.66	59.15
KRH36161	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	40.84	58.45
Os10t0572100-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane, plastid	40.98	57.09
TraesCS1B01G192000.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	40.71	56.71
AT5G46610.1	Thale cress	cytosol, peroxisome, plasma membrane	41.52	56.35
TraesCS1A01G189900.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	40.43	56.23
TraesCS1D01G194000.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	40.3	56.14
EER90182	Sorghum	mitochondrion	40.16	55.95
KRG90597	Soybean	golgi, mitochondrion	38.81	55.86
HORVU1Hr1G049820.21	Barley	endoplasmic reticulum, peroxisome	40.71	54.95
CDX77675	Canola	cytosol, golgi, plasma membrane	40.3	54.8
GSMUA_Achr4P21730_001	Banana	plasma membrane	45.86	54.17
CDX87698	Canola	plasma membrane	21.85	53.85
CDY63048	Canola	plasma membrane	40.16	53.72
AT5G46600.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	38.4	52.5
Zm00001d036652_P001	Maize	mitochondrion	39.76	52.23
CDY59584	Canola	cytosol, endoplasmic reticulum, plasma membrane	37.86	51.67
Bra022048.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	37.86	51.67
Bra025011.1-P	Field mustard	plasma membrane	39.89	50.0
CDX87700	Canola	cytosol	16.69	46.24
AT4G17585.1	Thale cress	cytosol	9.23	44.74
VIT_02s0025g02320.t01	Wine grape	cytosol	15.47	40.0
VIT_07s0104g00100.t01	Wine grape	plastid	22.12	38.81
VIT_06s0009g00450.t01	Wine grape	plasma membrane	23.47	36.12
KRH36162	Soybean	endoplasmic reticulum, plasma membrane, plastid	39.48	35.79
VIT_15s0046g00130.t01	Wine grape	plasma membrane	23.61	35.22
VIT_08s0105g00250.t01	Wine grape	cytosol, golgi, plasma membrane	23.07	35.05
VIT_06s0080g00200.t01	Wine grape	plasma membrane	13.16	34.28
VIT_06s0009g00480.t01	Wine grape	golgi, peroxisome, plasma membrane	21.57	31.99
VIT_06s0080g00170.t01	Wine grape	golgi, peroxisome, plasma membrane	21.85	31.82
VIT_02s0025g00700.t01	Wine grape	plasma membrane	19.4	28.66
VIT_17s0000g03850.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	22.66	28.4
VIT_18s0122g00020.t01	Wine grape	endoplasmic reticulum, extracellular	7.6	26.42
VIT_01s0011g03290.t01	Wine grape	plasma membrane	21.85	14.26

Protein Annotations

EntrezGene:100245421	wikigene:100245421	EntrezGene:100250549	wikigene:100250549	MapMan:24.3.11	InterPro:ALMT
EMBL:AM430945	ProteinID:CAN78112	ProteinID:CAN78112.1	ProteinID:CBI33905	ProteinID:CBI33905.3	UniProt:D7TTZ0
EMBL:FN596247	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0006810	GO:GO:0008150	GO:GO:0009705	GO:GO:0015140
GO:GO:0015743	GO:GO:0016020	GO:GO:0016021	GO:GO:0071423	EntrezGene:LOC100245421	wikigene:LOC100245421
EntrezGene:LOC100250549	wikigene:LOC100250549	PFAM:PF07534	PFAM:PF11744	PANTHER:PTHR31086	PANTHER:PTHR31086:SF2
TIGR:TC63686	InterPro:TLDc_dom	TMHMM:TMhelix	UniParc:UPI0001BE44F2	ArrayExpress:VIT_02s0012g01030	EnsemblPlantsGene:VIT_02s0012g01030
EnsemblPlants:VIT_02s0012g01030.t01	unigene:Vvi.22323	unigene:Vvi.8927	RefSeq:XP_002278575	RefSeq:XP_002278575.1	RefSeq:XP_002278594
RefSeq:XP_002278594.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:+:6988089..7006989

Molecular Weight (calculated)

81408.9 Da

IEP (calculated)

7.699

GRAVY (calculated)

-0.009

Length

737 amino acids

Sequence
(BLAST)

001: MLIEKLSYAV SGISGEDGKK SVAVFAEKMR VLPCLVWQRI SKVGRDDPKR VIHSLKVGVS LTLVSLLYLM EPLFKGIGEN AIWAVMTVVV VLEFTAGATL
101: CKGLNRGLGT VLAGSLAFLM EYIATSSGHV FRAVFIGTAV FLTGAVATYI RFFPFIKKNY DYGVVIFILT FNLITVSSYR VDNVLQLAHE RFYTIVIGCA
201: ICLFMSLLIF PNWSGEALHN SMVCKLEGLA KSVEACVDEY FNNAEEQEKK DEPSEDPIYK GYKAVLDSKS TEETLALHAS WEPRHSIHCY RFPGQQYVKL
301: GAALRHFGYT IVALHGCLQT EIQTPHSVRA LFKDPCFQVA AEVSKVLKEL ANCIRARRHC GQELLSDHLH EALQDLNTAV KSQPRLFLGS NKNQATNMLA
401: VAAATARQKR EKYSGVSLSS VKTDSSALME WKSKRASEQS SEADRKVLRP TLSKLAITSL EFSEALPFAA FASLLVETVA RLELVIAEVE ELARVASFKE
501: YKPDDEFVMA CCVSNSALQW WKTSPRSLFG WNTGRKNTDD SPQPKYYDID LPFSPSLVAK TFLRGKELKC CYKASIDGFS ATNFHGCCDF KGPCVIIGYT
601: NKSFKFGAFN PEGYRSTDDY YDTFDAFLFY WTDNEKSDPI ILPKVGGSGA ALFDYARGGP QFGADGLLIG PPLAPVMGGF AGPDTNSGIG DLRQAKSRLG
701: LSYAKRVDGK ESLFGDESRA TLEEVQVFCS PQIASLY

Best Arabidopsis Sequence Match ( AT4G17970.1 )
(BLAST)

001: MSNKVHVGSL EMEEGLSKTK WMVLEPSEKI KKIPKRLWNV GKEDPRRVIH ALKVGLSLTL VSLLYLMEPL FKGIGSNAIW AVMTVVVVLE FSAGATLCKG
101: LNRGLGTLIA GSLAFFIEFV ANDSGKVLRA IFIGTAVFII GAAATYIRFI PYIKKNYDYG VVIFLLTFNL ITVSSYRVDS VINIAHDRFY TIAVGCGICL
201: FMSLLVFPIW SGEDLHKTTV GKLQGLSRSI EACVDEYFEE KEKEKTDSKD RIYEGYQAVL DSKSTDETLA LYANWEPRHT LRCHRFPCQQ YVKVGAVLRQ
301: FGYTVVALHG CLQTEIQTPR SVRALFKDPC VRLAGEVCKA LTELADSISN HRHCSPEILS DHLHVALQDL NSAIKSQPKL FLGSNLHRHN NKHQNGSISN
401: NKHHQRNSSN SGKDLNGDVS LQNTETGTRK ITETGSRQGQ NGAVSLSSFR TDTSALMEYR RSFKNSNSEM SAAGERRMLR PQLSKIAVMT SLEFSEALPF
501: AAFASLLVEM VARLDNVIEE VEELGRIASF KEYDNKRDQT ADDVRCENPA NVTISVGAAE

Arabidopsis Description

ALMT12Aluminum-activated malate transporter 12 [Source:UniProtKB/Swiss-Prot;Acc:O49696]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.