Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plastid, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 1
- endoplasmic reticulum 2
- nucleus 1
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G189900.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 85.44 | 85.28 |
| TraesCS1D01G194000.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 85.26 | 85.26 |
| TraesCS1B01G192000.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 85.07 | 85.07 |
| HORVU1Hr1G049820.21 | Barley | endoplasmic reticulum, peroxisome | 85.63 | 82.97 |
| EER90182 | Sorghum | mitochondrion | 78.64 | 78.64 |
| Zm00001d036652_P001 | Maize | mitochondrion | 78.64 | 74.15 |
| CDX90432 | Canola | cytosol | 58.03 | 58.48 |
| CDY01507 | Canola | cytosol | 57.66 | 58.32 |
| KRH77215 | Soybean | cytosol, peroxisome, plasma membrane | 58.79 | 57.91 |
| KRH28280 | Soybean | peroxisome | 58.22 | 57.36 |
| Solyc08g006990.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 57.09 | 56.77 |
| Bra012627.1-P | Field mustard | cytosol | 57.09 | 56.45 |
| PGSC0003DMT400052884 | Potato | cytosol | 56.9 | 55.95 |
| KRH58213 | Soybean | cytosol | 55.2 | 55.62 |
| KRH04324 | Soybean | cytosol | 56.33 | 55.29 |
| GSMUA_Achr4P21730_001 | Banana | plasma membrane | 65.03 | 55.13 |
| KRG90598 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 54.06 | 55.11 |
| AT4G17970.1 | Thale cress | cytosol | 58.22 | 55.0 |
| CDX87698 | Canola | plasma membrane | 30.81 | 54.52 |
| KRG90599 | Soybean | plasma membrane | 50.47 | 53.83 |
| Solyc06g061100.2.1 | Tomato | plasma membrane | 52.36 | 53.07 |
| KRH36161 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 51.61 | 53.01 |
| KRG90597 | Soybean | golgi, mitochondrion | 50.47 | 52.15 |
| CDX77675 | Canola | cytosol, golgi, plasma membrane | 52.93 | 51.66 |
| AT5G46610.1 | Thale cress | cytosol, peroxisome, plasma membrane | 52.93 | 51.57 |
| CDY63048 | Canola | plasma membrane | 52.93 | 50.82 |
| Bra022048.1-P | Field mustard | cytosol, endoplasmic reticulum, plasma membrane | 51.61 | 50.56 |
| CDY59584 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 51.61 | 50.56 |
| AT5G46600.1 | Thale cress | cytosol, endoplasmic reticulum, plasma membrane | 50.85 | 49.91 |
| Bra025011.1-P | Field mustard | plasma membrane | 52.36 | 47.11 |
| CDX87700 | Canola | cytosol | 21.93 | 43.61 |
| AT4G17585.1 | Thale cress | cytosol | 11.91 | 41.45 |
| VIT_02s0012g01030.t01 | Wine grape | plasma membrane | 57.09 | 40.98 |
| KRH04321 | Soybean | golgi | 52.93 | 38.3 |
| PGSC0003DMT400005384 | Potato | plasma membrane | 42.91 | 34.03 |
| Os04t0417000-01 | Rice | cytosol, plastid, vacuole | 28.36 | 32.97 |
| Os02t0673100-02 | Rice | cytosol | 31.76 | 32.88 |
| KRH36162 | Soybean | endoplasmic reticulum, plasma membrane, plastid | 49.15 | 31.98 |
| Os04t0567200-01 | Rice | plasma membrane | 31.0 | 31.97 |
| Os06t0268800-01 | Rice | cytosol, plasma membrane, plastid | 22.31 | 30.41 |
| Os02t0673000-01 | Rice | golgi, mitochondrion, plasma membrane | 12.85 | 30.09 |
| Os01t0221600-00 | Rice | golgi, peroxisome, plasma membrane | 28.17 | 28.44 |
| Os01t0737500-01 | Rice | cytosol, plasma membrane, vacuole | 15.69 | 26.77 |
| Os02t0730600-00 | Rice | endoplasmic reticulum, peroxisome, plasma membrane, plastid | 29.3 | 26.54 |
| Os06t0331900-01 | Rice | cytosol, peroxisome, plasma membrane | 29.87 | 23.65 |
Protein Annotations
| MapMan:24.3.11 | EntrezGene:4349462 | ProteinID:AAL86482.1 | ProteinID:AAP55112.1 | InterPro:ALMT | ProteinID:BAF27298.1 |
| ProteinID:BAT12164.1 | ncoils:Coil | ProteinID:EEE51447.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0009705 | GO:GO:0015140 | GO:GO:0015743 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0071423 |
| EnsemblPlantsGene:Os10g0572100 | EnsemblPlants:Os10t0572100-01 | PFAM:PF11744 | PANTHER:PTHR31086 | PANTHER:PTHR31086:SF2 | UniProt:Q8S7M8 |
| TMHMM:TMhelix | UniParc:UPI00000A3742 | RefSeq:XP_015614622.1 | SEG:seg | : | : |
Description
Uncharacterised protein family UPF0005 domain containing protein. (Os10t0572100-01)
Coordinates
chr10:-:22682292..22684755
Molecular Weight (calculated)
58879.0 Da
IEP (calculated)
8.670
GRAVY (calculated)
-0.021
Length
529 amino acids
Sequence
(BLAST)
(BLAST)
001: MACAPDPSNN KNSSSILHQQ VKKISRIPFS WGAHAWGIGR EDPRRAIHAL KVGTALTLVS LLYILEPLFK GVGKNAMWAV MTVVVVLEFT AGATICKGLN
101: RGLGTILAGS LAFIIELVAV RSGKVFRALF VGSSVFLIGF AATYLRFFPS IKKNYDYGVV IFLLTFNLIT VSSFRQEDVV PLARDRLSTI AIGCAICLFM
201: SLFVLPNWSG EDLHSSTVRK FEGLARSIEA CVTEYFQDQD KDDKILDKQA SRASIHIGYR AVLDSKSSDE TLAHYASWEP RHSMQCYSYP WQKYVKIGSV
301: LRHFAYTVAA LHGCLESEIQ TPPSVRSLFR NPCTRVAREV VKVLQELAVS IRDHHRCAPD VLSDHLHEAL QDLNSAIRSQ PRLFLGSKHA CANSHVLMEL
401: NSSKHTATRT TLPSFKTDGT SLLERRNTKA DQPSERNERG TLRPTLSKIA MTSLEFSEAL PFAAFASLLV EMVVRLEMVI EEVKELERAA NFREFTGHDY
501: LTIDLTSNDK MRNPNGVPLD SHTISTAAE
101: RGLGTILAGS LAFIIELVAV RSGKVFRALF VGSSVFLIGF AATYLRFFPS IKKNYDYGVV IFLLTFNLIT VSSFRQEDVV PLARDRLSTI AIGCAICLFM
201: SLFVLPNWSG EDLHSSTVRK FEGLARSIEA CVTEYFQDQD KDDKILDKQA SRASIHIGYR AVLDSKSSDE TLAHYASWEP RHSMQCYSYP WQKYVKIGSV
301: LRHFAYTVAA LHGCLESEIQ TPPSVRSLFR NPCTRVAREV VKVLQELAVS IRDHHRCAPD VLSDHLHEAL QDLNSAIRSQ PRLFLGSKHA CANSHVLMEL
401: NSSKHTATRT TLPSFKTDGT SLLERRNTKA DQPSERNERG TLRPTLSKIA MTSLEFSEAL PFAAFASLLV EMVVRLEMVI EEVKELERAA NFREFTGHDY
501: LTIDLTSNDK MRNPNGVPLD SHTISTAAE
001: MSNKVHVGSL EMEEGLSKTK WMVLEPSEKI KKIPKRLWNV GKEDPRRVIH ALKVGLSLTL VSLLYLMEPL FKGIGSNAIW AVMTVVVVLE FSAGATLCKG
101: LNRGLGTLIA GSLAFFIEFV ANDSGKVLRA IFIGTAVFII GAAATYIRFI PYIKKNYDYG VVIFLLTFNL ITVSSYRVDS VINIAHDRFY TIAVGCGICL
201: FMSLLVFPIW SGEDLHKTTV GKLQGLSRSI EACVDEYFEE KEKEKTDSKD RIYEGYQAVL DSKSTDETLA LYANWEPRHT LRCHRFPCQQ YVKVGAVLRQ
301: FGYTVVALHG CLQTEIQTPR SVRALFKDPC VRLAGEVCKA LTELADSISN HRHCSPEILS DHLHVALQDL NSAIKSQPKL FLGSNLHRHN NKHQNGSISN
401: NKHHQRNSSN SGKDLNGDVS LQNTETGTRK ITETGSRQGQ NGAVSLSSFR TDTSALMEYR RSFKNSNSEM SAAGERRMLR PQLSKIAVMT SLEFSEALPF
501: AAFASLLVEM VARLDNVIEE VEELGRIASF KEYDNKRDQT ADDVRCENPA NVTISVGAAE
101: LNRGLGTLIA GSLAFFIEFV ANDSGKVLRA IFIGTAVFII GAAATYIRFI PYIKKNYDYG VVIFLLTFNL ITVSSYRVDS VINIAHDRFY TIAVGCGICL
201: FMSLLVFPIW SGEDLHKTTV GKLQGLSRSI EACVDEYFEE KEKEKTDSKD RIYEGYQAVL DSKSTDETLA LYANWEPRHT LRCHRFPCQQ YVKVGAVLRQ
301: FGYTVVALHG CLQTEIQTPR SVRALFKDPC VRLAGEVCKA LTELADSISN HRHCSPEILS DHLHVALQDL NSAIKSQPKL FLGSNLHRHN NKHQNGSISN
401: NKHHQRNSSN SGKDLNGDVS LQNTETGTRK ITETGSRQGQ NGAVSLSSFR TDTSALMEYR RSFKNSNSEM SAAGERRMLR PQLSKIAVMT SLEFSEALPF
501: AAFASLLVEM VARLDNVIEE VEELGRIASF KEYDNKRDQT ADDVRCENPA NVTISVGAAE
Arabidopsis Description
ALMT12Aluminum-activated malate transporter 12 [Source:UniProtKB/Swiss-Prot;Acc:O49696]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.