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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • extracellular 3
  • endoplasmic reticulum 4
  • vacuole 3
  • plasma membrane 5
  • golgi 3
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:nucleus
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc06g061100.2.1 Tomato plasma membrane 56.97 72.8
VIT_02s0012g01030.t01 Wine grape plasma membrane 62.37 56.45
KRH04321 Soybean golgi 55.92 51.03
PGSC0003DMT400052884 Potato cytosol 40.03 49.63
KRH77215 Soybean cytosol, peroxisome, plasma membrane 39.58 49.16
KRH28280 Soybean peroxisome 39.28 48.79
KRH58213 Soybean cytosol 37.93 48.19
CDX90432 Canola cytosol 37.48 47.62
CDX87698 Canola plasma membrane 21.29 47.49
CDY01507 Canola cytosol 37.03 47.23
Bra012627.1-P Field mustard cytosol 37.48 46.73
KRH04324 Soybean cytosol 37.18 46.01
KRG90598 Soybean endoplasmic reticulum, peroxisome, plasma membrane 35.68 45.86
KRG90599 Soybean plasma membrane 33.58 45.16
AT4G17970.1 Thale cress cytosol 37.78 45.0
AT5G46610.1 Thale cress cytosol, peroxisome, plasma membrane 36.28 44.57
KRH36161 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 33.43 43.3
KRG90597 Soybean golgi, mitochondrion 33.13 43.16
CDX77675 Canola cytosol, golgi, plasma membrane 34.93 42.99
Os10t0572100-01 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 34.03 42.91
TraesCS1A01G189900.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 33.58 42.26
TraesCS1B01G192000.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 33.43 42.16
EER90182 Sorghum mitochondrion 33.43 42.16
TraesCS1D01G194000.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 33.43 42.16
CDY63048 Canola plasma membrane 34.78 42.11
CDY59584 Canola cytosol, endoplasmic reticulum, plasma membrane 33.88 41.85
Bra022048.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 33.88 41.85
AT5G46600.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 33.43 41.37
HORVU1Hr1G049820.21 Barley endoplasmic reticulum, peroxisome 33.43 40.84
Zm00001d036652_P001 Maize mitochondrion 33.28 39.57
Bra025011.1-P Field mustard plasma membrane 34.78 39.46
GSMUA_Achr4P21730_001 Banana plasma membrane 36.43 38.94
CDX87700 Canola cytosol 13.04 32.71
PGSC0003DMT400075167 Potato golgi 12.44 29.33
PGSC0003DMT400085620 Potato endoplasmic reticulum, plasma membrane, vacuole 13.19 28.39
KRH36162 Soybean endoplasmic reticulum, plasma membrane, plastid 33.88 27.8
PGSC0003DMT400072326 Potato golgi 16.94 27.76
PGSC0003DMT400000350 Potato endoplasmic reticulum, golgi 14.09 25.97
PGSC0003DMT400047767 Potato plasma membrane 16.49 25.76
PGSC0003DMT400050498 Potato cytosol, peroxisome, plasma membrane 15.44 23.57
AT4G17585.1 Thale cress cytosol 5.25 23.03
PGSC0003DMT400089827 Potato endoplasmic reticulum, golgi 13.64 22.2
PGSC0003DMT400033766 Potato cytosol 17.39 21.6
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 18.44 20.36
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 17.39 20.32
PGSC0003DMT400069527 Potato plasma membrane 16.94 20.11
PGSC0003DMT400087967 Potato cytosol 17.69 17.74
PGSC0003DMT400086999 Potato cytosol, endoplasmic reticulum, plasma membrane 17.39 17.44
Protein Annotations
EnsemblPlants:PGSC0003DMT400005384EnsemblPlantsGene:PGSC0003DMG400002104EntrezGene:102605699GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTInterPro:TLDc_domPANTHER:PTHR31086
PANTHER:PTHR31086:SF2PFAM:PF07534PFAM:PF11744PGSC:PGSC0003DMG400002104SEG:segTMHMM:TMhelix
UniParc:UPI000294AD76UniProt:M0ZPT5MapMan:24.3.11:::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400002104]
Coordinates
chr6:-:44608315..44614617
Molecular Weight (calculated)
74282.6 Da
IEP (calculated)
6.335
GRAVY (calculated)
0.070
Length
667 amino acids
Sequence
(BLAST)
001: MEPLFKGIGE NAIWAVMTVV VVLEFTTGAM TTYMRFFSHI KKNYDYGVVI FLLTFNLITV SSYRVDSVLK IAHERFYTIA IGCSICLLMS LFIFPIWSGE
101: DLHLSTVAKF DGLAKSIEGA TLYKGLNRGL GTLLAGLLAF LIERIANESG HIFHAAFIGT AVFLVGAMTT YMRFFSHIKK NYDYGVVIFL LTFNLITVSS
201: YRVDSVLKIA HERFYTIAIG CSICLLMSLF IFPIWSGEDL HLSTVAKFDG LAKSIEVCIN EYFSDGNINQ QEEKVKKYSM EMEDPIYKGY KDVLDSKSSD
301: ETLTPQSVRV LFKDPCNRLA REVTKTLKEL GDSIRNRRKY SPEIPSNHVH EALQDLIDAL KSQPRLFLST NSNTNILLAL ATLATRQKSG KDFLVSLPSV
401: NNDDPARFGL SHDLMLKEGD KKILRPTLSK NGITSLEFLE ALPFAAFASL LVEIVARLDL VIEQVVELGR VAQFKEYSHD DVVINVSCDN NPRVERRELK
501: CCYKASVDGF SATEFHNRSD FKGPCVIIGY TTKAFKFGAF NPEGYRSTDD YYDTFDAFLF YWDEDVEKPI MLPKVGGSGA ALFDYARGGP QFGADGLLIG
601: PPLAPVMGGF AGPDTNSGVG DLRQAKSRLG LSYAKRPDGK ESLFGDESKA VIDEVLVFCS PQIASLY
Best Arabidopsis Sequence Match ( AT4G17970.1 )
(BLAST)
001: MSNKVHVGSL EMEEGLSKTK WMVLEPSEKI KKIPKRLWNV GKEDPRRVIH ALKVGLSLTL VSLLYLMEPL FKGIGSNAIW AVMTVVVVLE FSAGATLCKG
101: LNRGLGTLIA GSLAFFIEFV ANDSGKVLRA IFIGTAVFII GAAATYIRFI PYIKKNYDYG VVIFLLTFNL ITVSSYRVDS VINIAHDRFY TIAVGCGICL
201: FMSLLVFPIW SGEDLHKTTV GKLQGLSRSI EACVDEYFEE KEKEKTDSKD RIYEGYQAVL DSKSTDETLA LYANWEPRHT LRCHRFPCQQ YVKVGAVLRQ
301: FGYTVVALHG CLQTEIQTPR SVRALFKDPC VRLAGEVCKA LTELADSISN HRHCSPEILS DHLHVALQDL NSAIKSQPKL FLGSNLHRHN NKHQNGSISN
401: NKHHQRNSSN SGKDLNGDVS LQNTETGTRK ITETGSRQGQ NGAVSLSSFR TDTSALMEYR RSFKNSNSEM SAAGERRMLR PQLSKIAVMT SLEFSEALPF
501: AAFASLLVEM VARLDNVIEE VEELGRIASF KEYDNKRDQT ADDVRCENPA NVTISVGAAE
Arabidopsis Description
ALMT12Aluminum-activated malate transporter 12 [Source:UniProtKB/Swiss-Prot;Acc:O49696]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.