Factsheet for PGSC0003DMT400075167

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

nucleus 2
plastid 1
golgi 3
endoplasmic reticulum 1
plasma membrane 2
vacuole 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	golgi
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g065070.1.1	Tomato	peroxisome	91.52	59.82
VIT_07s0104g00100.t01	Wine grape	plastid	53.36	35.95
KRG95509	Soybean	plasma membrane	47.0	33.42
KRH71433	Soybean	nucleus, plasma membrane, vacuole	51.94	32.45
KRH67188	Soybean	plasma membrane	48.41	30.18
KRH32007	Soybean	plasma membrane	33.57	30.16
PGSC0003DMT400000350	Potato	endoplasmic reticulum, golgi	32.86	25.69
PGSC0003DMT400072326	Potato	golgi	32.86	22.85
PGSC0003DMT400047767	Potato	plasma membrane	30.39	20.14
PGSC0003DMT400085620	Potato	endoplasmic reticulum, plasma membrane, vacuole	21.91	20.0
PGSC0003DMT400052884	Potato	cytosol	37.1	19.52
PGSC0003DMT400089827	Potato	endoplasmic reticulum, golgi	27.21	18.78
PGSC0003DMT400050498	Potato	cytosol, peroxisome, plasma membrane	28.98	18.76
PGSC0003DMT400001472	Potato	golgi, peroxisome, plasma membrane	29.68	14.71
PGSC0003DMT400033766	Potato	cytosol	27.56	14.53
PGSC0003DMT400069527	Potato	plasma membrane	28.62	14.41
PGSC0003DMT400014614	Potato	cytosol, plasma membrane, vacuole	28.27	13.24
PGSC0003DMT400087967	Potato	cytosol	30.74	13.08
PGSC0003DMT400086999	Potato	cytosol, endoplasmic reticulum, plasma membrane	30.04	12.78
PGSC0003DMT400005384	Potato	plasma membrane	29.33	12.44

Protein Annotations

EnsemblPlants:PGSC0003DMT400075167	EnsemblPlantsGene:PGSC0003DMG400029245	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015743
GO:GO:0016020	GO:GO:0016021	InterPro:ALMT	PANTHER:PTHR31086	PANTHER:PTHR31086:SF13	PFAM:PF11744
PGSC:PGSC0003DMG400029245	SEG:seg	TMHMM:TMhelix	UniParc:UPI000296B156	UniProt:M1CUR1	MapMan:24.3.11

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400029245]

Coordinates

chr00:+:33237597..33241051

Molecular Weight (calculated)

31802.7 Da

IEP (calculated)

6.519

GRAVY (calculated)

0.019

Length

283 amino acids

Sequence
(BLAST)

001: MTVTLYDGTG VGATYSRLIP SVKKKYDYGV LIFILTFSLV VVSGVRADKI MKLAGERLSN IVMGFAVCIF TSFISLLKRN MDNSYPTLVG CLEEYFVIAN
101: DKEKKATIDI SGCKSVMHSK SSDESLANFA KWEPWHGKFG FFYPWEKYLN IGEVLRELAA MIISFKGCIQ SVRQSSPTER DSIREPCEKI GLSLATILME
201: LGDSIRDMKR CRAKSLITQS MREELSLLVN LDNNNNSTDN ESTLGLASFI FQILEMVDKV ELLATKVEEL GEIAHFHDKK LDV

Best Arabidopsis Sequence Match ( AT4G00910.1 )
(BLAST)

001: MATQEAGKLE WRISVDNGTT ERLVPRSGLS KRIFLWLKDL VMKVIMERVA KFMRKAWRIG ADDPAKVVHC LKVGLALSLV SIFYYMRPLY DGVGGNAMWA
101: IMTVVVVFES NVGATFCKCV NRVVATILAG SLGIAVHWVA TQSGKAEVFV IGCSVFLFAF AATYSRFVPS FKARFDYGAM IFILTFSLVS VGGYRVDKLV
201: ELAQQRVSTI AIGTSICIII TVFFCPIWAG SQLHRLIERN LEKLADSLDG CVAEYFKENE VSTNRNEDEN TNMKLQGFKC VLNSKGTEEA MANLARWEPA
301: HGSFNFRHPW KLYVKIGAAM RRCAYCLENL SICINYETEA PDQVKNHFGE ACMKLSSASS KILRELADMM KNTRKSSKMD FLVFDMNSAV QELQETLKNV
401: PIETNKPEEV PSEEENKVDS EERTTSMSLH EVLPVATLVS LLIENAARIQ TAVEAVDELA NLADFEQDSK KKTGDNNTKQ PPLSS

Arabidopsis Description

Aluminium activated malate transporter family protein [Source:TAIR;Acc:AT4G00910]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.