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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400086999 Potato cytosol, endoplasmic reticulum, plasma membrane 90.83 90.83
Solyc01g007090.1.1 Tomato cytosol 81.95 87.62
PGSC0003DMT400085620 Potato endoplasmic reticulum, plasma membrane, vacuole 27.07 58.06
PGSC0003DMT400072326 Potato golgi 33.68 55.04
PGSC0003DMT400089827 Potato endoplasmic reticulum, golgi 32.63 52.93
VIT_08s0105g00250.t01 Wine grape cytosol, golgi, plasma membrane 34.89 47.84
KRG96263 Soybean nucleus 34.44 47.41
KRH68006 Soybean golgi, peroxisome, plasma membrane 34.29 46.91
CDY52054 Canola cytosol, peroxisome, plasma membrane 29.32 44.93
AT3G11680.2 Thale cress plasma membrane 33.08 44.9
PGSC0003DMT400050498 Potato cytosol, peroxisome, plasma membrane 29.02 44.16
GSMUA_Achr8P30390_001 Banana cytosol, endoplasmic reticulum, plasma membrane 27.67 43.91
Bra038672.1-P Field mustard plasma membrane 32.03 43.47
CDY01048 Canola cytosol, golgi, plasma membrane 31.88 43.44
GSMUA_Achr6P35650_001 Banana plastid 29.32 43.05
CDY08504 Canola cytosol, golgi, plasma membrane 31.43 42.74
Bra034819.1-P Field mustard cytosol, golgi, plasma membrane 31.43 42.65
PGSC0003DMT400047767 Potato plasma membrane 25.71 40.05
TraesCS2B01G314100.1 Wheat plasma membrane 27.22 39.96
KXG26278 Sorghum cytosol, peroxisome, plasma membrane 26.77 39.91
Zm00001d003749_P001 Maize plasma membrane 27.67 39.66
Os04t0417000-01 Rice cytosol, plastid, vacuole 27.07 39.56
TraesCS2A01G297900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 24.66 39.42
Zm00001d025373_P001 Maize cytosol, peroxisome, plasma membrane 25.86 39.18
OQU81544 Sorghum peroxisome 26.02 38.44
OQU81543 Sorghum cytosol, peroxisome, plasma membrane 24.51 38.17
HORVU2Hr1G073840.3 Barley peroxisome, plasma membrane 27.22 38.11
TraesCS2D01G295900.1 Wheat plasma membrane 27.22 37.4
TraesCS4D01G283600.1 Wheat plasma membrane 25.56 36.48
PGSC0003DMT400000350 Potato endoplasmic reticulum, golgi 18.5 33.98
OQU75600 Sorghum cytosol 9.92 32.2
PGSC0003DMT400075167 Potato golgi 13.08 30.74
PGSC0003DMT400052884 Potato cytosol 22.56 27.88
PGSC0003DMT400033766 Potato cytosol 19.85 24.58
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 19.7 22.94
PGSC0003DMT400069527 Potato plasma membrane 19.25 22.78
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 20.6 22.68
PGSC0003DMT400005384 Potato plasma membrane 17.74 17.69
Protein Annotations
EnsemblPlants:PGSC0003DMT400087967EnsemblPlantsGene:PGSC0003DMG400037538EntrezGene:107060828GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF3
PFAM:PF11744PGSC:PGSC0003DMG400037538RefSeq:XP_015164682.1SEG:segTMHMM:TMhelixUniParc:UPI00029562FB
UniProt:M1DEY4MapMan:24.3.11::::
Description
Aluminum-activated malate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400037538]
Coordinates
chr1:+:3056014..3060143
Molecular Weight (calculated)
74644.2 Da
IEP (calculated)
6.591
GRAVY (calculated)
-0.141
Length
665 amino acids
Sequence
(BLAST)
001: MEIDSTNQEN LSIFTKWWNK LKDFPRKFQK KIEKIAKNTK QIGKDDPRKI WHAFKVGLAL TLVSLFYYTE PLFHNFDQPV MWAVLTVVVT FEFTAGATIS
101: KSINRGIGTA LAGAFGLGAK YLAELIGREG PNPIILGVLV FIVGALGTFT RFYPHIKRRY DYGTMIFVLT FSLVAVSGYR SENIFQLAHR RISTILIGVF
201: TVMIISMIIR PVWAGEDLHK LASTNLEKLA SYLEGFGSEY FHISENKSVE GNNNNEKGFH EVFLSILGSK ATEESLANLA WWEPPHGGFK FNHPWKQYLK
301: IGSLVRKCAC HLLALSNHIN SKSQAPNEFE RRTEEACKKM IMESKKALKE LALSIKTMAQ PISSIRNTKN VIDDLKLTLG TSKTLFQYDE SRVLDFVPTA
401: SVVSLLISVT KCVDEISEAI KELSSKARFE KKSMSPPPPS RSHWPQILHR GTVNPIVEDE VDGGDLVTIE IGDNVESKRK VVVEEVNPIV EDDVDGGDFV
501: TIEIGDNVES KGKVVVEEVN RVNNQINATK EESFVIWIRG STAMAIVEEM KTPKKMGDFM DLVDIKLYNS TQFLESSEGV LTVLEGANQV NNPLTVTEGE
601: SVVIGIRGNT TTTKVEEMEM TKKKVELTDL TDIKFNNSIQ FLESILMTVT TVVEEMKMTE KKETL
Best Arabidopsis Sequence Match ( AT3G11680.2 )
(BLAST)
001: MEMDLNAQEK KAGFFQRLQD FPSKLKDDVT KRVKNVQKFA KDDPRRIIHS MKVGVALTLV SLLYYVRPLY ISFGVTGMWA ILTVVVVFEF TVGGTLSKGL
101: NRGFATLIAG ALGVGAVHLA RFFGHQGEPI VLGILVFSLG AAATFSRFFP RIKQRYDYGA LIFILTFSFV AISGYRTDEI LIMAYQRLST ILIGGTICIL
201: VSIFICPVWA GEDLHKMIAN NINKLAKYLE GFEGEYFQPE KISKETSSCV REYKSILTSK STEDSLANLA RWEPGHGRFR LRHPWKKYLK IAGLVRQCAV
301: HLEILNGYVL SNDKAPQEFE SKIQEPITTM SREVGEALKA IAKSIKTMRN DSACVNAHID NSKKAIKNLK IALKSSYPET YKDLLEIIPG VTMASILIEV
401: VNCVEKIYEA VEEFSGLAHF KETLDSKLSA EIGQHQLLHR GCVKPVLDGD NEKEDNSSCH VLITVHDEGY LPTATAKNVL GAEKTRVDIV
Arabidopsis Description
Aluminum activated malate transporter family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRV2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.