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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400087967 Potato cytosol 87.62 81.95
PGSC0003DMT400086999 Potato cytosol, endoplasmic reticulum, plasma membrane 85.37 79.85
Solyc10g081890.1.1 Tomato nucleus 40.19 52.3
Solyc01g007080.2.1 Tomato peroxisome 39.39 51.58
VIT_08s0105g00250.t01 Wine grape cytosol, golgi, plasma membrane 34.73 44.54
KRG96263 Soybean nucleus 34.24 44.1
KRH68006 Soybean golgi, peroxisome, plasma membrane 33.92 43.42
AT3G11680.2 Thale cress plasma membrane 33.92 43.06
CDY52054 Canola cytosol, peroxisome, plasma membrane 29.74 42.63
Solyc11g068970.1.1 Tomato cytosol, peroxisome, plasma membrane 31.99 42.61
Bra038672.1-P Field mustard plasma membrane 32.48 41.22
CDY01048 Canola cytosol, golgi, plasma membrane 32.15 40.98
CDY08504 Canola cytosol, golgi, plasma membrane 31.67 40.29
Bra034819.1-P Field mustard cytosol, golgi, plasma membrane 31.67 40.2
GSMUA_Achr6P35650_001 Banana plastid 29.26 40.18
GSMUA_Achr8P30390_001 Banana cytosol, endoplasmic reticulum, plasma membrane 27.01 40.1
Solyc11g071350.1.1 Tomato nucleus 27.33 37.95
Solyc06g074100.1.1 Tomato plasma membrane 27.81 37.05
KXG26278 Sorghum cytosol, peroxisome, plasma membrane 26.37 36.77
Os04t0417000-01 Rice cytosol, plastid, vacuole 26.69 36.48
Zm00001d003749_P001 Maize plasma membrane 27.17 36.42
TraesCS2B01G314100.1 Wheat plasma membrane 26.37 36.2
Zm00001d025373_P001 Maize cytosol, peroxisome, plasma membrane 25.4 35.99
TraesCS2A01G297900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 23.79 35.58
OQU81544 Sorghum peroxisome 25.4 35.11
Solyc08g082950.2.1 Tomato plasma membrane 26.85 35.08
HORVU2Hr1G073840.3 Barley peroxisome, plasma membrane 26.53 34.74
OQU81543 Sorghum cytosol, peroxisome, plasma membrane 23.79 34.66
TraesCS2D01G295900.1 Wheat plasma membrane 26.37 33.88
Solyc01g096140.2.1 Tomato cytosol, peroxisome, plasma membrane 26.85 33.53
TraesCS4D01G283600.1 Wheat plasma membrane 24.28 32.4
Solyc09g065070.1.1 Tomato peroxisome 22.51 32.33
OQU75600 Sorghum cytosol 9.81 29.76
Solyc08g006990.1.1 Tomato cytosol, peroxisome, plasma membrane 23.15 27.07
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 6.91 26.22
Solyc06g061100.2.1 Tomato plasma membrane 21.06 25.1
Solyc05g009580.2.1 Tomato cytosol 20.42 23.52
Solyc05g009590.2.1 Tomato plasma membrane 19.77 23.47
Solyc03g096820.2.1 Tomato golgi, peroxisome, plasma membrane, plastid 20.26 22.07
Solyc03g119640.2.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 21.54 22.0
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 12.38 19.95
Protein Annotations
MapMan:24.3.11InterPro:ALMTGO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0006810GO:GO:0008150GO:GO:0009705
GO:GO:0015140GO:GO:0015743GO:GO:0016020GO:GO:0016021GO:GO:0071423UniProt:K4ASS5
PFAM:PF11744PANTHER:PTHR31086PANTHER:PTHR31086:SF3EnsemblPlantsGene:Solyc01g007090.1EnsemblPlants:Solyc01g007090.1.1TMHMM:TMhelix
UniParc:UPI00027626F1SEG:seg::::
Description
No Description!
Coordinates
chr1:+:1649310..1653839
Molecular Weight (calculated)
70257.1 Da
IEP (calculated)
7.860
GRAVY (calculated)
-0.128
Length
622 amino acids
Sequence
(BLAST)
001: MEINSTNQEN HSVSTKWWNK LKYIPRKIQK KIGKIAKNTK QIGKDDPRKI WHAFKVGLAL TLVSLFYYTE PLFHNFDQPV MWAILTVVVT FEFTAGATIS
101: KSINRGIGTA LAGAFGLGAK YLAELIGREG ALGTFTRFYP HIKRRYDYGT MIFVLTFSLV AISGYRIENI FELAHRRIST IIIGIFTVMF ISIIIRPVWA
201: GEDLHKLASI NLEKLASYLE GFGSEYFHIS EIKSVEGNKN NEKGLHEALL SIIGSKANEE SLANLAWWEP PHGGFKFNHP WKQYLKIGSL VRKCACHLLA
301: LNSHINSKSQ APNEFERRIE EVCKKMIMES KNALKEFALS IKTMAQPISY ICNTKNVIDD LKLTLGTSKT FFRYDESRVM DCVPTASVVS LLIAVTKCVD
401: EISEAIEELS SKARFEKKSM SPATASRSHR PRILHRGTVN PIVEDEMNGG DFVSIEIGDN VDSKGEVVVE EVNQVNNTIN ATKEESFVIW ISGSTAMAIV
501: EEMITPKKIG DFMDLVDIKL YNNIPFVEST KGVLTVLEEA NQVNNTLFKT EEESIVIGIR GNTTTTKVEE MEMTENKVEL TDLTDIKFNN SIQFLESILM
601: TVTTIVEEMK TTEKRRFCKF SR
Best Arabidopsis Sequence Match ( AT3G11680.2 )
(BLAST)
001: MEMDLNAQEK KAGFFQRLQD FPSKLKDDVT KRVKNVQKFA KDDPRRIIHS MKVGVALTLV SLLYYVRPLY ISFGVTGMWA ILTVVVVFEF TVGGTLSKGL
101: NRGFATLIAG ALGVGAVHLA RFFGHQGEPI VLGILVFSLG AAATFSRFFP RIKQRYDYGA LIFILTFSFV AISGYRTDEI LIMAYQRLST ILIGGTICIL
201: VSIFICPVWA GEDLHKMIAN NINKLAKYLE GFEGEYFQPE KISKETSSCV REYKSILTSK STEDSLANLA RWEPGHGRFR LRHPWKKYLK IAGLVRQCAV
301: HLEILNGYVL SNDKAPQEFE SKIQEPITTM SREVGEALKA IAKSIKTMRN DSACVNAHID NSKKAIKNLK IALKSSYPET YKDLLEIIPG VTMASILIEV
401: VNCVEKIYEA VEEFSGLAHF KETLDSKLSA EIGQHQLLHR GCVKPVLDGD NEKEDNSSCH VLITVHDEGY LPTATAKNVL GAEKTRVDIV
Arabidopsis Description
Aluminum activated malate transporter family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRV2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.