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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • mitochondrion 1
  • peroxisome 2
  • nucleus 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, secretory
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:mitochondrion, nucleus, peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
OQU75600 Sorghum cytosol 47.31 98.54
OQU81544 Sorghum peroxisome 99.06 94.0
KXG26278 Sorghum cytosol, peroxisome, plasma membrane 65.57 62.78
TraesCS2A01G297900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 60.66 62.26
TraesCS2B01G314100.1 Wheat plasma membrane 65.81 62.03
Os04t0417000-01 Rice cytosol, plastid, vacuole 64.17 60.22
HORVU2Hr1G073840.3 Barley peroxisome, plasma membrane 65.11 58.53
TraesCS2D01G295900.1 Wheat plasma membrane 66.28 58.47
TraesCS4D01G283600.1 Wheat plasma membrane 61.12 56.01
GSMUA_Achr8P30390_001 Banana cytosol, endoplasmic reticulum, plasma membrane 51.05 52.03
GSMUA_Achr6P35650_001 Banana plastid 54.57 51.43
VIT_06s0009g00450.t01 Wine grape plasma membrane 45.43 40.5
CDX97484 Canola plasma membrane 12.65 39.71
CDY52054 Canola cytosol, peroxisome, plasma membrane 40.28 39.63
VIT_08s0105g00250.t01 Wine grape cytosol, golgi, plasma membrane 44.73 39.38
Solyc11g068970.1.1 Tomato cytosol, peroxisome, plasma membrane 42.39 38.76
VIT_06s0080g00200.t01 Wine grape plasma membrane 25.53 38.52
PGSC0003DMT400050498 Potato cytosol, peroxisome, plasma membrane 38.41 37.53
KRH26686 Soybean golgi, peroxisome, plasma membrane 38.17 37.47
KRH25315 Soybean plasma membrane 41.92 37.21
VIT_06s0009g00480.t01 Wine grape golgi, peroxisome, plasma membrane 43.09 37.02
PGSC0003DMT400047767 Potato plasma membrane 37.0 37.0
KRH30357 Soybean plasma membrane 41.69 36.85
VIT_06s0080g00170.t01 Wine grape golgi, peroxisome, plasma membrane 43.56 36.76
KRH26685 Soybean plasma membrane 38.17 36.47
Solyc10g081890.1.1 Tomato nucleus 40.75 36.4
Solyc11g071350.1.1 Tomato nucleus 37.47 35.71
Bra038672.1-P Field mustard plasma membrane 40.98 35.71
CDY08504 Canola cytosol, golgi, plasma membrane 40.52 35.38
Bra034819.1-P Field mustard cytosol, golgi, plasma membrane 40.52 35.31
KRG96263 Soybean nucleus 39.81 35.2
KRH68006 Soybean golgi, peroxisome, plasma membrane 40.05 35.19
CDY01048 Canola cytosol, golgi, plasma membrane 39.81 34.84
Solyc06g074100.1.1 Tomato plasma membrane 37.94 34.69
CDX97483 Canola plasma membrane 38.17 34.46
AT3G11680.2 Thale cress plasma membrane 39.34 34.29
PGSC0003DMT400072326 Potato golgi 32.55 34.15
PGSC0003DMT400085620 Potato endoplasmic reticulum, plasma membrane, vacuole 24.36 33.55
CDY31147 Canola plasma membrane 37.7 32.66
AT1G08440.1 Thale cress cytosol, golgi, plasma membrane 38.17 32.53
Bra030726.1-P Field mustard cytosol, golgi, plasma membrane 37.94 32.53
CDY31146 Canola cytosol, golgi, plasma membrane 37.94 32.53
CDX93562 Canola cytosol, golgi, plasma membrane 38.64 32.48
CDX95060 Canola cytosol, golgi, plasma membrane 38.64 32.48
Bra018625.1-P Field mustard cytosol, golgi, plasma membrane 38.64 32.48
Bra030725.1-P Field mustard plasma membrane 37.24 32.32
Bra034339.1-P Field mustard golgi 37.0 32.11
EES12682 Sorghum cytosol 36.77 31.85
EES05741 Sorghum cytosol 37.24 31.8
Solyc01g007080.2.1 Tomato peroxisome 35.36 31.79
AT2G27240.1 Thale cress golgi 37.47 31.62
CDX97489 Canola cytosol, golgi, plasma membrane 37.24 31.36
CDY30563 Canola plasma membrane 37.24 31.12
CDX77103 Canola golgi 37.24 31.12
AT1G08430.1 Thale cress golgi 35.36 30.63
PGSC0003DMT400089827 Potato endoplasmic reticulum, golgi 29.27 30.49
CDX97487 Canola plasma membrane 25.76 28.5
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 20.14 26.79
EER90182 Sorghum mitochondrion 32.32 26.09
PGSC0003DMT400087967 Potato cytosol 38.17 24.51
PGSC0003DMT400086999 Potato cytosol, endoplasmic reticulum, plasma membrane 37.94 24.36
EER89808 Sorghum cytosol, endoplasmic reticulum, peroxisome, plastid 38.17 24.22
Solyc01g007090.1.1 Tomato cytosol 34.66 23.79
OQU85465 Sorghum golgi 25.53 21.04
EER89585 Sorghum plastid 27.17 18.83
CDX97488 Canola endoplasmic reticulum 0.0 0.0
Protein Annotations
EnsemblPlants:OQU81543EnsemblPlantsGene:SORBI_3006G075300GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015743
GO:GO:0016020GO:GO:0016021InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF8PFAM:PF11744
ProteinID:OQU81543ProteinID:OQU81543.1RefSeq:XP_002447813.1SEG:segTMHMM:TMhelixUniParc:UPI0001A87096
UniProt:A0A1Z5RCP6MapMan:24.3.11::::
Description
hypothetical protein
Coordinates
chr6:-:43835494..43840158
Molecular Weight (calculated)
46750.8 Da
IEP (calculated)
6.904
GRAVY (calculated)
0.228
Length
427 amino acids
Sequence
(BLAST)
001: MESLTTEEGN SNGGGGGGGF LANCREQLRW ALDRLIISSR GTAVGFVGKL AKIARDDPRR VAHSLKVGLA LTLVSVLYYV TPLFNGWGDS VIWAVITVVV
101: VMEFTVAHMA ANLCGEKGEP ILLGVFVFLV GSAATFSRFI PELKARYDYG VMIFILTFTM VAVSSYRVDE LLEFAHERLT TVAVGVTICL FTTVFVFPIW
201: AGEDLHNLAA DSLEKLAEFL EGMESECFRE NSPCENLEGK AFLQVYKGVL NSKVREDSLC TFAKWEPIHG KFRFRHPWGQ YQKLGALCRQ CASSMEALAS
301: CVVVLKKSQY PEANPELCLK LRGTCGAMSL HSAKALRGLS LAVRTMTLPC QTNDMSTAAK AASDFRTQLS EDAALLQVMH VAVVASLLSD VVIQIERITE
401: STSKLARLAR FTNPERPPSA VVINVED
Best Arabidopsis Sequence Match ( AT3G11680.1 )
(BLAST)
001: MDLNAQEKKA GFFQRLQDFP SKLKDDVTKR VKNVQKFAKD DPRRIIHSMK VGVALTLVSL LYYVRPLYIS FGVTGMWAIL TVVVVFEFTV GGTLSKGLNR
101: GFATLIAGAL GVGAVHLARF FGHQGEPIVL GILVFSLGAA ATFSRFFPRI KQRYDYGALI FILTFSFVAI SGYRTDEILI MAYQRLSTIL IGGTICILVS
201: IFICPVWAGE DLHKMIANNI NKLAKYLEGF EGEYFQPEKI SKETSSCVRE YKSILTSKST EDSLANLARW EPGHGRFRLR HPWKKYLKIA GLVRQCAVHL
301: EILNGYVLSN DKAPQEFESK IQEPITTMSR EVGEALKAIA KSIKTMRNDS ACVNAHIDNS KKAIKNLKIA LKSSYPETYK DLLEIIPGVT MASILIEVVN
401: CVEKIYEAVE EFSGLAHFKE TLDSKLSAEI GQHQLLHRGC VKPVLDGDNE KEDNSSCHVL ITVHDEGYLP TATAKNVLGA EKTRVDIV
Arabidopsis Description
Aluminum activated malate transporter family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRV2]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.