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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plastid, cytosol, peroxisome

Predictor Summary:
  • nucleus 2
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
  • cytosol 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d046029_P001 Maize plastid 90.79 90.65
TraesCS7D01G338100.1 Wheat peroxisome 64.78 65.56
TraesCS7B01G241400.1 Wheat peroxisome 64.93 65.42
Os06t0331900-01 Rice cytosol, peroxisome, plasma membrane 64.64 65.12
HORVU7Hr1G081320.3 Barley peroxisome 61.37 63.25
TraesCS7A01G341500.1 Wheat cytosol, peroxisome, plasma membrane 62.26 63.01
EES12682 Sorghum cytosol 39.23 53.55
EES05741 Sorghum cytosol 38.04 51.2
GSMUA_Achr2P09980_001 Banana cytosol 32.69 50.23
GSMUA_AchrUn_... Banana cytosol 33.58 48.71
GSMUA_Achr9P00890_001 Banana cytosol, peroxisome, plasma membrane 31.8 46.32
VIT_02s0025g02320.t01 Wine grape cytosol 19.17 45.26
KXG26278 Sorghum cytosol, peroxisome, plasma membrane 28.23 42.6
CDY07155 Canola cytosol, peroxisome, plasma membrane 29.42 42.22
CDX74373 Canola plasma membrane 29.87 42.14
AT4G00910.1 Thale cress plasma membrane 30.31 42.06
CDY51721 Canola plasma membrane 29.27 41.83
Bra037402.1-P Field mustard cytosol, peroxisome, plasma membrane 28.97 41.4
Bra008542.1-P Field mustard plasma membrane 27.64 41.06
VIT_15s0046g00130.t01 Wine grape plasma membrane 30.01 40.89
Solyc01g096140.2.1 Tomato cytosol, peroxisome, plasma membrane 30.16 40.76
CDX97239 Canola plasma membrane 29.12 40.5
CDY01945 Canola plasma membrane 28.38 40.04
CDY01943 Canola plasma membrane 28.38 40.04
CDX91864 Canola plasma membrane 30.01 40.0
KRG92525 Soybean plasma membrane 29.27 39.8
Solyc08g082950.2.1 Tomato plasma membrane 27.93 39.5
KRH34268 Soybean plasma membrane 28.83 39.11
Bra000933.1-P Field mustard plasma membrane 30.46 38.83
OQU81544 Sorghum peroxisome 25.56 38.22
OQU81543 Sorghum cytosol, peroxisome, plasma membrane 24.22 38.17
PGSC0003DMT400000350 Potato endoplasmic reticulum, golgi 20.21 37.57
OQU75600 Sorghum cytosol 9.66 31.71
EER90182 Sorghum mitochondrion 24.07 30.62
OQU85465 Sorghum golgi 20.95 27.22
EER89585 Sorghum plastid 21.55 23.54
Protein Annotations
MapMan:24.3.11EntrezGene:8073050InterPro:ALMTUniProt:C5Z362ncoils:CoilEnsemblPlants:EER89808
ProteinID:EER89808ProteinID:EER89808.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0006810GO:GO:0008150GO:GO:0009705
GO:GO:0015140GO:GO:0015743GO:GO:0016020GO:GO:0016021GO:GO:0071423PFAM:PF11744
PANTHER:PTHR31086PANTHER:PTHR31086:SF9EnsemblPlantsGene:SORBI_3010G147200TMHMM:TMhelixUniParc:UPI0001A89709RefSeq:XP_002438441.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr10:-:42040799..42043406
Molecular Weight (calculated)
72206.5 Da
IEP (calculated)
7.913
GRAVY (calculated)
0.005
Length
673 amino acids
Sequence
(BLAST)
001: MAGAAAHQTT SYADDGSPEW SVAMPAAAAE HENTKSSRRA LVVRRLFSWL VAPMHGLASL ATTACLWLFS LAAAARDRVV GVARMAWRIG ADDPRKVAHG
101: FKMALALTLC SVFYYVQPLY VFTGQNAMWA VLTVVVVFEY TVGGCLYKGL NRAMATVTGA ALALGVQWIA SKCGKELEPF ILSGSLFVFA AAATYSRFLP
201: KMKARFDYGV TIFILTYTLV AVGGYRVNEV AFMAQHRLTT IAIGAMICFG VCAFVFPVWA GQELHDQVAH NMDKLAAAVE SCVEDYFSEA AAGADVAAPA
301: LSDKSHGYKA VLNAKASEDS LANLATWEPA HGKFRFRHPY HLYQKVGAAM RSCAYCVDAL AASVGSEAQT PAHVKKHLAG ASAALGRHCS AMLREASGSV
401: ASMTRSGRLA LVVGDMNAAA QELRDELRCL APLLELDEST DTEQEQNITT SPAPAPPLIE ALPLFTAASL LLEICTRAEG VVSAVDNLAI TARFKKADHG
501: EETTHDVEAA VPTTMSTILT ADAPQETHAK AAVDHGKTET PTDESSADQT PRDQVDELLK VLMRRRSTKK WARGDTKVCP KPPLDFVVHA PSPRSRSMEL
601: TVTGHHAQVA PSPRHRSVEL TSHPPVAPSP RNRSVDFASH GPGLPSPRNR SMDFGNHGPV VPSPRHRSIL GMA
Best Arabidopsis Sequence Match ( AT4G00910.1 )
(BLAST)
001: MATQEAGKLE WRISVDNGTT ERLVPRSGLS KRIFLWLKDL VMKVIMERVA KFMRKAWRIG ADDPAKVVHC LKVGLALSLV SIFYYMRPLY DGVGGNAMWA
101: IMTVVVVFES NVGATFCKCV NRVVATILAG SLGIAVHWVA TQSGKAEVFV IGCSVFLFAF AATYSRFVPS FKARFDYGAM IFILTFSLVS VGGYRVDKLV
201: ELAQQRVSTI AIGTSICIII TVFFCPIWAG SQLHRLIERN LEKLADSLDG CVAEYFKENE VSTNRNEDEN TNMKLQGFKC VLNSKGTEEA MANLARWEPA
301: HGSFNFRHPW KLYVKIGAAM RRCAYCLENL SICINYETEA PDQVKNHFGE ACMKLSSASS KILRELADMM KNTRKSSKMD FLVFDMNSAV QELQETLKNV
401: PIETNKPEEV PSEEENKVDS EERTTSMSLH EVLPVATLVS LLIENAARIQ TAVEAVDELA NLADFEQDSK KKTGDNNTKQ PPLSS
Arabidopsis Description
Aluminium activated malate transporter family protein [Source:TAIR;Acc:AT4G00910]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.