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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra037402.1-P Field mustard cytosol, peroxisome, plasma membrane 98.3 98.3
CDY07155 Canola cytosol, peroxisome, plasma membrane 95.54 95.95
CDX74373 Canola plasma membrane 85.35 84.28
CDX97239 Canola plasma membrane 86.41 84.09
CDY01945 Canola plasma membrane 85.14 84.07
CDY01943 Canola plasma membrane 85.14 84.07
AT4G00910.1 Thale cress plasma membrane 84.93 82.47
CDX91864 Canola plasma membrane 86.2 80.4
VIT_15s0046g00130.t01 Wine grape plasma membrane 54.14 51.62
Solyc01g096140.2.1 Tomato cytosol, peroxisome, plasma membrane 51.8 49.0
CDX97484 Canola plasma membrane 13.59 47.06
Zm00001d017570_P001 Maize cytosol, peroxisome, plasma membrane 48.2 46.42
PGSC0003DMT400000350 Potato endoplasmic reticulum, golgi 35.46 46.13
EES05741 Sorghum cytosol 48.41 45.6
Zm00001d017571_P001 Maize peroxisome 46.92 45.29
TraesCS6D01G236500.1 Wheat plasma membrane 46.71 45.27
GSMUA_AchrUn_... Banana cytosol 44.37 45.04
GSMUA_Achr9P00890_001 Banana cytosol, peroxisome, plasma membrane 44.16 45.02
TraesCS6A01G255200.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 46.28 44.86
GSMUA_Achr2P09980_001 Banana cytosol 41.61 44.75
TraesCS6B01G270300.1 Wheat cytosol, nucleus, peroxisome 45.86 44.26
HORVU2Hr1G095430.2 Barley plasma membrane 11.46 44.26
TraesCS2B01G420600.1 Wheat cytosol 44.59 44.03
Os02t0673100-02 Rice cytosol 47.13 43.44
TraesCS2A01G402400.2 Wheat cytosol 44.59 41.58
Os04t0567200-01 Rice plasma membrane 45.22 41.52
TraesCS2D01G399700.2 Wheat cytosol 44.37 41.39
EES12682 Sorghum cytosol 43.1 41.18
Zm00001d026102_P001 Maize plasma membrane 43.1 40.12
CDY52054 Canola cytosol, peroxisome, plasma membrane 35.03 38.02
CDY31146 Canola cytosol, golgi, plasma membrane 36.73 34.74
CDX87698 Canola plasma membrane 21.87 34.45
CDX97489 Canola cytosol, golgi, plasma membrane 36.73 34.12
CDX97483 Canola plasma membrane 34.18 34.04
CDY08504 Canola cytosol, golgi, plasma membrane 35.24 33.95
CDX95060 Canola cytosol, golgi, plasma membrane 36.52 33.86
CDY01048 Canola cytosol, golgi, plasma membrane 35.03 33.81
CDX93562 Canola cytosol, golgi, plasma membrane 36.31 33.66
CDY31147 Canola plasma membrane 34.18 32.66
CDX97487 Canola plasma membrane 25.48 31.09
CDY30563 Canola plasma membrane 33.33 30.72
CDX77103 Canola golgi 33.33 30.72
CDY01507 Canola cytosol 33.76 30.4
CDX90432 Canola cytosol 33.76 30.29
HORVU7Hr1G081320.3 Barley peroxisome 41.83 30.17
Os06t0331900-01 Rice cytosol, peroxisome, plasma membrane 42.25 29.79
TraesCS7D01G338100.1 Wheat peroxisome 41.83 29.62
CDX77675 Canola cytosol, golgi, plasma membrane 33.97 29.52
TraesCS7B01G241400.1 Wheat peroxisome 41.83 29.49
EER89808 Sorghum cytosol, endoplasmic reticulum, peroxisome, plastid 41.83 29.27
Zm00001d046029_P001 Maize plastid 41.61 29.08
CDY63048 Canola plasma membrane 33.97 29.04
TraesCS7A01G341500.1 Wheat cytosol, peroxisome, plasma membrane 40.98 29.02
CDY59584 Canola cytosol, endoplasmic reticulum, plasma membrane 32.27 28.15
CDY24338 Canola plasma membrane 21.23 27.7
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 18.26 26.79
CDY42102 Canola peroxisome 29.51 25.46
CDX84992 Canola peroxisome 29.09 25.09
CDY26161 Canola mitochondrion 29.51 24.82
CDY36105 Canola cytosol, peroxisome, plasma membrane 29.94 24.74
CDY24400 Canola cytosol, peroxisome, plasma membrane 30.15 24.52
CDY19211 Canola mitochondrion 29.3 24.47
CDX81872 Canola peroxisome, plastid, vacuole 14.01 22.84
CDY18521 Canola plasma membrane 28.66 20.3
CDX87700 Canola cytosol 10.62 18.8
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 28.45 10.35
CDX97488 Canola endoplasmic reticulum 0.0 0.0
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:CDY51721EnsemblPlantsGene:GSBRNA2T00004072001GO:A0A078IP25GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF4
PFAM:PF11744ProteinID:CDY51721ProteinID:CDY51721.1SEG:segTMHMM:TMhelixUniParc:UPI0004EEEC5B
UniProt:A0A078IP25MapMan:24.3.11::::
Description
BnaA09g52080DBnaA09g52080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IP25]
Coordinates
chrLK033021:-:62412..64322
Molecular Weight (calculated)
52584.7 Da
IEP (calculated)
7.354
GRAVY (calculated)
0.006
Length
471 amino acids
Sequence
(BLAST)
001: MASKVEPGKL EWRISVDNET TNRLVPKSGP SERIFLWLKG LIMKTWRIGA DDPAKVVHCL KVGLALSLVC IFYYMRPLYD GVGGNAMWAI MTVVVVFESN
101: VGATFSKCVN RVVATILAGS LGIAVHWVAT KSGEAEIFVI GSSVFLFAFT ATYSRFVPSF KSRFDYGAMI FILTFSLVSV GGYRVDKLVD MAQQRVSTIA
201: VGTTICIIIT IFICPIWSGT QLHRLVQCNF VKLADSLDGC VAEYFKKRDV STNENEDETN MKVQGFKCVL NSKGTEEAMA NLARWEPAHG SFNFRHPWQQ
301: YVKIGAAMRR CAYCLENLSI CMNYETEVPD QVKKHFRETC MKLTAASSKI LRELADILKN TRRSSKMDFL VFDMNSAVQE LQETLKTIPI QTNKPEEEEE
401: VPSDEGEDRT IPMSLHEVLP VATLVSLLIE NAARIQTTVE AVDVLANLAD FKQDSKKKTG DNNTNQPPLS S
Best Arabidopsis Sequence Match ( AT1G08430.1 )
(BLAST)
001: MEKVREIVRE GIRVGNEDPR RIIHAFKVGL ALVLVSSFYY YQPFGPFTDY FGINAMWAVM TVVVVFEFSV GATLGKGLNR GVATLVAGGL GIGAHQLARL
101: SGATVEPILL VMLVFVQAAL STFVRFFPWV KTKFDYGILI FILTFALISL SGFRDEEIMD LAESRLSTVV IGGVSCILIS IFVCPVWAGQ DLHSLLASNF
201: DTLSHFLQDF GDEYFEAREK GDYKVVEKRK KNLERYKSVL DSKSDEEALA NYAEWEPPHG QFRFRHPWKQ YVAVGALLRQ CAYRIDALNS YINSDFQIPV
301: DIKKKLETPL RRMSSESGNS MKEMSISLKQ MIKSSSSDIH VSNSQAACKS LSTLLKSGIL NDVEPLQMIS LMTTVSMLID IVNLTEKISE SVHELASAAR
401: FKNKMRPTVL YEKSDSGSIG RAMPIDSHED HHVVTVLHDV DNDRSNNVDD SRGGSSQDSC HHVAIKIVDD NSNHEKHEDG EIHVHTLSNG HLQ
Arabidopsis Description
ALMT1Aluminum-activated malate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE9]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.