Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97489 | Canola | cytosol, golgi, plasma membrane | 87.23 | 55.23 |
| CDY31146 | Canola | cytosol, golgi, plasma membrane | 84.11 | 54.22 |
| CDX93562 | Canola | cytosol, golgi, plasma membrane | 82.55 | 52.17 |
| CDX95060 | Canola | cytosol, golgi, plasma membrane | 82.24 | 51.97 |
| AT1G08440.1 | Thale cress | cytosol, golgi, plasma membrane | 78.19 | 50.1 |
| CDY31147 | Canola | plasma membrane | 66.36 | 43.2 |
| CDX97483 | Canola | plasma membrane | 62.93 | 42.71 |
| CDY30563 | Canola | plasma membrane | 57.01 | 35.81 |
| CDX77103 | Canola | golgi | 56.7 | 35.62 |
| OQU75600 | Sorghum | cytosol | 21.81 | 34.15 |
| CDX97487 | Canola | plasma membrane | 36.14 | 30.05 |
| PGSC0003DMT400050498 | Potato | cytosol, peroxisome, plasma membrane | 37.69 | 27.69 |
| VIT_06s0009g00450.t01 | Wine grape | plasma membrane | 39.56 | 26.51 |
| Solyc11g068970.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 38.01 | 26.12 |
| KRH30357 | Soybean | plasma membrane | 35.83 | 23.81 |
| KRH25315 | Soybean | plasma membrane | 35.2 | 23.49 |
| GSMUA_Achr8P30390_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 28.66 | 21.96 |
| GSMUA_Achr6P35650_001 | Banana | plastid | 30.84 | 21.85 |
| TraesCS2B01G314100.1 | Wheat | plasma membrane | 29.91 | 21.19 |
| CDY52054 | Canola | cytosol, peroxisome, plasma membrane | 28.04 | 20.74 |
| CDY01048 | Canola | cytosol, golgi, plasma membrane | 31.46 | 20.7 |
| CDY08504 | Canola | cytosol, golgi, plasma membrane | 31.15 | 20.45 |
| OQU81543 | Sorghum | cytosol, peroxisome, plasma membrane | 26.79 | 20.14 |
| Os04t0417000-01 | Rice | cytosol, plastid, vacuole | 28.35 | 20.0 |
| KXG26278 | Sorghum | cytosol, peroxisome, plasma membrane | 27.73 | 19.96 |
| TraesCS2D01G295900.1 | Wheat | plasma membrane | 29.91 | 19.83 |
| HORVU2Hr1G073840.3 | Barley | peroxisome, plasma membrane | 29.28 | 19.79 |
| Zm00001d003749_P001 | Maize | plasma membrane | 27.73 | 19.18 |
| CDY07155 | Canola | cytosol, peroxisome, plasma membrane | 27.73 | 18.98 |
| OQU81544 | Sorghum | peroxisome | 26.48 | 18.89 |
| CDX74373 | Canola | plasma membrane | 28.04 | 18.87 |
| CDY01945 | Canola | plasma membrane | 28.04 | 18.87 |
| CDY01943 | Canola | plasma membrane | 28.04 | 18.87 |
| Zm00001d025373_P001 | Maize | cytosol, peroxisome, plasma membrane | 25.55 | 18.68 |
| TraesCS2A01G297900.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 23.99 | 18.51 |
| CDX97239 | Canola | plasma membrane | 27.73 | 18.39 |
| CDY51721 | Canola | plasma membrane | 26.79 | 18.26 |
| TraesCS4D01G283600.1 | Wheat | plasma membrane | 26.17 | 18.03 |
| CDX91864 | Canola | plasma membrane | 27.73 | 17.62 |
| CDX87700 | Canola | cytosol | 12.15 | 14.66 |
| CDY01507 | Canola | cytosol | 19.94 | 12.24 |
| CDY59584 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 20.56 | 12.22 |
| CDX84992 | Canola | peroxisome | 20.56 | 12.09 |
| CDX90432 | Canola | cytosol | 19.63 | 12.0 |
| CDX77675 | Canola | cytosol, golgi, plasma membrane | 20.25 | 11.99 |
| CDY19211 | Canola | mitochondrion | 20.87 | 11.88 |
| CDY63048 | Canola | plasma membrane | 20.25 | 11.8 |
| CDY26161 | Canola | mitochondrion | 20.56 | 11.79 |
| CDY42102 | Canola | peroxisome | 19.94 | 11.72 |
| CDY24338 | Canola | plasma membrane | 13.08 | 11.63 |
| CDY36105 | Canola | cytosol, peroxisome, plasma membrane | 20.25 | 11.4 |
| CDY24400 | Canola | cytosol, peroxisome, plasma membrane | 20.56 | 11.4 |
| CDY18521 | Canola | plasma membrane | 20.87 | 10.08 |
| CDX87698 | Canola | plasma membrane | 9.03 | 9.7 |
| CDX95521 | Canola | endoplasmic reticulum, mitochondrion, nucleus, plasma membrane | 21.18 | 5.25 |
| CDX81872 | Canola | peroxisome, plastid, vacuole | 4.36 | 4.84 |
| CDY18522 | Canola | cytosol, golgi, nucleus, plastid | 0.93 | 0.43 |
| CDX97484 | Canola | plasma membrane | 0.0 | 0.0 |
| CDX97488 | Canola | endoplasmic reticulum | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX97485 | EnsemblPlantsGene:GSBRNA2T00104678001 | GO:A0A078E5Z4 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015743 |
| InterPro:ALMT | ncoils:Coil | PANTHER:PTHR31086 | PANTHER:PTHR31086:SF22 | PFAM:PF11744 | ProteinID:CDX97485 |
| ProteinID:CDX97485.1 | SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0004EE2073 | MapMan:35.1 | : |
Description
BnaC08g13500D
Coordinates
chrLK031899:+:1218422..1220009
Molecular Weight (calculated)
36324.9 Da
IEP (calculated)
6.191
GRAVY (calculated)
-0.421
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGVSCVLIS IFICPVWAGQ DLHSLLASNF DTLSHFLQEF GEEYFEATDD GYVKEVEKKR KNLQRYKSVL NSKSNEEALA NFAKWEPRHG QFRFRHPWKQ
101: YLAEAALLRQ CAYWIDALNS YITSDFQIPM DIKKKLEEPL AKMSSESRKS MKEVSISSKK MRKSSSYDIH VLNSQSACKD LTTLLKTGIL NDVEPLQMIA
201: LMTTVSLLID IVNLTEKNAE SVHELASAAR FENKKKSTVS DFVSTGRSVP IKSQDDHVVT ILCDDDISNT VDQSRVESSV DSCHHVAIKI DDEDDSVHEK
301: HEDGEIRVHT SCVSYRAAQH S
101: YLAEAALLRQ CAYWIDALNS YITSDFQIPM DIKKKLEEPL AKMSSESRKS MKEVSISSKK MRKSSSYDIH VLNSQSACKD LTTLLKTGIL NDVEPLQMIA
201: LMTTVSLLID IVNLTEKNAE SVHELASAAR FENKKKSTVS DFVSTGRSVP IKSQDDHVVT ILCDDDISNT VDQSRVESSV DSCHHVAIKI DDEDDSVHEK
301: HEDGEIRVHT SCVSYRAAQH S
001: MEKVREIVRE GIRVGNEDPR RIIHAFKVGL ALVLVSSFYY YQPFGPFTDY FGINAMWAVM TVVVVFEFSV GATLGKGLNR GVATLVAGGL GIGAHQLARL
101: SGATVEPILL VMLVFVQAAL STFVRFFPWV KTKFDYGILI FILTFALISL SGFRDEEIMD LAESRLSTVV IGGVSCILIS IFVCPVWAGQ DLHSLLASNF
201: DTLSHFLQDF GDEYFEAREK GDYKVVEKRK KNLERYKSVL DSKSDEEALA NYAEWEPPHG QFRFRHPWKQ YVAVGALLRQ CAYRIDALNS YINSDFQIPV
301: DIKKKLETPL RRMSSESGNS MKEMSISLKQ MIKSSSSDIH VSNSQAACKS LSTLLKSGIL NDVEPLQMIS LMTTVSMLID IVNLTEKISE SVHELASAAR
401: FKNKMRPTVL YEKSDSGSIG RAMPIDSHED HHVVTVLHDV DNDRSNNVDD SRGGSSQDSC HHVAIKIVDD NSNHEKHEDG EIHVHTLSNG HLQ
101: SGATVEPILL VMLVFVQAAL STFVRFFPWV KTKFDYGILI FILTFALISL SGFRDEEIMD LAESRLSTVV IGGVSCILIS IFVCPVWAGQ DLHSLLASNF
201: DTLSHFLQDF GDEYFEAREK GDYKVVEKRK KNLERYKSVL DSKSDEEALA NYAEWEPPHG QFRFRHPWKQ YVAVGALLRQ CAYRIDALNS YINSDFQIPV
301: DIKKKLETPL RRMSSESGNS MKEMSISLKQ MIKSSSSDIH VSNSQAACKS LSTLLKSGIL NDVEPLQMIS LMTTVSMLID IVNLTEKISE SVHELASAAR
401: FKNKMRPTVL YEKSDSGSIG RAMPIDSHED HHVVTVLHDV DNDRSNNVDD SRGGSSQDSC HHVAIKIVDD NSNHEKHEDG EIHVHTLSNG HLQ
Arabidopsis Description
ALMT1Aluminum-activated malate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE9]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.