Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77103 | Canola | golgi | 99.22 | 99.22 |
| Bra034339.1-P | Field mustard | golgi | 93.74 | 97.36 |
| AT2G27240.1 | Thale cress | golgi | 80.43 | 81.23 |
| CDX97484 | Canola | plasma membrane | 20.94 | 78.68 |
| CDX93562 | Canola | cytosol, golgi, plasma membrane | 65.95 | 66.34 |
| CDY31146 | Canola | cytosol, golgi, plasma membrane | 64.58 | 66.27 |
| CDX97489 | Canola | cytosol, golgi, plasma membrane | 65.36 | 65.88 |
| CDX95060 | Canola | cytosol, golgi, plasma membrane | 65.36 | 65.75 |
| CDX97483 | Canola | plasma membrane | 57.53 | 62.16 |
| CDY31147 | Canola | plasma membrane | 58.71 | 60.85 |
| CDX97485 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 35.81 | 57.01 |
| CDX97487 | Canola | plasma membrane | 41.49 | 54.92 |
| Solyc11g068970.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 46.77 | 51.18 |
| VIT_06s0009g00450.t01 | Wine grape | plasma membrane | 46.77 | 49.9 |
| PGSC0003DMT400050498 | Potato | cytosol, peroxisome, plasma membrane | 42.66 | 49.89 |
| KRH30357 | Soybean | plasma membrane | 46.97 | 49.69 |
| KRH25315 | Soybean | plasma membrane | 46.58 | 49.48 |
| GSMUA_Achr8P30390_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 36.2 | 44.15 |
| CDY52054 | Canola | cytosol, peroxisome, plasma membrane | 36.4 | 42.86 |
| GSMUA_Achr6P35650_001 | Banana | plastid | 37.57 | 42.38 |
| TraesCS2B01G314100.1 | Wheat | plasma membrane | 37.18 | 41.94 |
| TraesCS2A01G297900.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 32.88 | 40.38 |
| KXG26278 | Sorghum | cytosol, peroxisome, plasma membrane | 35.03 | 40.13 |
| Zm00001d025373_P001 | Maize | cytosol, peroxisome, plasma membrane | 34.25 | 39.86 |
| Os04t0417000-01 | Rice | cytosol, plastid, vacuole | 35.42 | 39.78 |
| CDY01048 | Canola | cytosol, golgi, plasma membrane | 37.96 | 39.75 |
| CDY08504 | Canola | cytosol, golgi, plasma membrane | 37.77 | 39.47 |
| TraesCS2D01G295900.1 | Wheat | plasma membrane | 37.18 | 39.26 |
| Zm00001d003749_P001 | Maize | plasma membrane | 35.62 | 39.22 |
| HORVU2Hr1G073840.3 | Barley | peroxisome, plasma membrane | 36.4 | 39.16 |
| OQU81544 | Sorghum | peroxisome | 33.66 | 38.22 |
| OQU81543 | Sorghum | cytosol, peroxisome, plasma membrane | 31.12 | 37.24 |
| TraesCS4D01G283600.1 | Wheat | plasma membrane | 33.66 | 36.91 |
| CDX87698 | Canola | plasma membrane | 20.55 | 35.12 |
| CDX74373 | Canola | plasma membrane | 31.9 | 34.17 |
| CDY07155 | Canola | cytosol, peroxisome, plasma membrane | 31.31 | 34.12 |
| CDY01943 | Canola | plasma membrane | 31.51 | 33.75 |
| CDY01945 | Canola | plasma membrane | 31.51 | 33.75 |
| CDY51721 | Canola | plasma membrane | 30.72 | 33.33 |
| CDX97239 | Canola | plasma membrane | 31.51 | 33.26 |
| CDX91864 | Canola | plasma membrane | 32.29 | 32.67 |
| OQU75600 | Sorghum | cytosol | 12.92 | 32.2 |
| CDY01507 | Canola | cytosol | 29.94 | 29.25 |
| CDX90432 | Canola | cytosol | 29.94 | 29.14 |
| CDY63048 | Canola | plasma membrane | 29.55 | 27.4 |
| CDX77675 | Canola | cytosol, golgi, plasma membrane | 28.77 | 27.12 |
| CDY59584 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 28.57 | 27.04 |
| CDY24338 | Canola | plasma membrane | 18.2 | 25.76 |
| CDY19211 | Canola | mitochondrion | 25.83 | 23.4 |
| CDY26161 | Canola | mitochondrion | 25.44 | 23.21 |
| CDY42102 | Canola | peroxisome | 24.66 | 23.08 |
| CDX84992 | Canola | peroxisome | 24.27 | 22.71 |
| CDY36105 | Canola | cytosol, peroxisome, plasma membrane | 25.24 | 22.63 |
| CDY24400 | Canola | cytosol, peroxisome, plasma membrane | 25.64 | 22.63 |
| CDX81872 | Canola | peroxisome, plastid, vacuole | 11.35 | 20.07 |
| CDY18521 | Canola | plasma membrane | 25.05 | 19.25 |
| CDX87700 | Canola | cytosol | 8.41 | 16.17 |
| CDX97488 | Canola | endoplasmic reticulum | 0.39 | 14.29 |
| CDX95521 | Canola | endoplasmic reticulum, mitochondrion, nucleus, plasma membrane | 25.44 | 10.04 |
| CDY18522 | Canola | cytosol, golgi, nucleus, plastid | 0.39 | 0.29 |
Protein Annotations
| EnsemblPlants:CDY30563 | EnsemblPlantsGene:GSBRNA2T00045297001 | GO:A0A078H1B4 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015743 | GO:GO:0016020 | GO:GO:0016021 | InterPro:ALMT | PANTHER:PTHR31086 | PANTHER:PTHR31086:SF22 |
| PFAM:PF11744 | ProteinID:CDY30563 | ProteinID:CDY30563.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EE337B |
| UniProt:A0A078H1B4 | MapMan:24.3.11 | : | : | : | : |
Description
BnaA04g15700DBnaA04g15700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H1B4]
Coordinates
chrLK032254:-:449179..452423
Molecular Weight (calculated)
57265.4 Da
IEP (calculated)
8.635
GRAVY (calculated)
0.017
Length
511 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKVRDLVRE GKRVAKEDPR RVVHSFKVGL VLSLVSSFYY YQPLYDSFGV NAMWAVMTVV VVFEFSVGAT LGKGLNRVAA TLFAGALGIG AHHLASLSGS
101: TGEPILLAIF VFIQAALSTF VRFFPRVKAR YDYSLLIFIL TFALISVSGF REEQVLVLTH KRISTVIIGG LSCVLISIFV CPVWAGQDLH SLLASNVEKL
201: SFFLLGISSN YHTRFRIVIF IIKKNKCWRL AEFGDKYCET VKDGDTKEVD KRKNDFDNYK SVLNSKSNEE SLANFAKWEP GHGQFRFRHP WKQYLIIGGL
301: IRQCAYRIDA LNSYLNADIQ VSIDIRKKLE EPLRRMSLES GKAMKEMSVS LTKMIKPSSS DLHVRNAQSA CKSLTSLLHS GILKEVESQE LISLLTAISL
401: LIDIINLTEN ILESLHELAS AARFKDKIES PIFAEKPNSK SIVCGWATKG QDDHVVTIVN DDCCNGNTSE KGNRSNKVLI HEKHEDYDDA HVHSSCDSCG
501: HTSLRVIVEC R
101: TGEPILLAIF VFIQAALSTF VRFFPRVKAR YDYSLLIFIL TFALISVSGF REEQVLVLTH KRISTVIIGG LSCVLISIFV CPVWAGQDLH SLLASNVEKL
201: SFFLLGISSN YHTRFRIVIF IIKKNKCWRL AEFGDKYCET VKDGDTKEVD KRKNDFDNYK SVLNSKSNEE SLANFAKWEP GHGQFRFRHP WKQYLIIGGL
301: IRQCAYRIDA LNSYLNADIQ VSIDIRKKLE EPLRRMSLES GKAMKEMSVS LTKMIKPSSS DLHVRNAQSA CKSLTSLLHS GILKEVESQE LISLLTAISL
401: LIDIINLTEN ILESLHELAS AARFKDKIES PIFAEKPNSK SIVCGWATKG QDDHVVTIVN DDCCNGNTSE KGNRSNKVLI HEKHEDYDDA HVHSSCDSCG
501: HTSLRVIVEC R
001: MEKVREIVRE GRRVAKEDPR RVVHSFKVGL VLALVSSFYY YQPLYDSFGV NAMWAVMTVV VVFEFSVGAT LGKGLNRVAA TLFAGGLGIG AHHLASMSGP
101: TGEPILLAVF VFVQAALSTF VRFFPRVKAR YDYSLLIFIL TFALISVSGF REEQVVKLTH KRISTVIIGG LSCVIISIFV CPVWAGQDLH SLIASNFEKL
201: SFFLLGNSFH YVSSDLNSIT LLRKIKSWRL ADFGDKYCEV VENDGAKEVD KRKKDFDNYK SVLNSKSNEE SLANFAKWEP GHGQFRFRHP WKQYLAVGEL
301: IRQCAYRIHA LNSYLNADNQ VSVDIKKKLG EPLRRMSLES GKAMKEMSIS LKKMTKPSSS DLHVQNAKSA CKSLTNLLNS GILKEVEPLE LVSLLTAISL
401: LIDIINLTEK ILESLHELAT AAKFKNKIEH PLFSEKPKAK SFVSVRSIKC HDDHVVIIIE DDGNNDDTSK NDNGSKEVSI HEKHEDDDTH VDARCVSCGH
501: TSVCVK
101: TGEPILLAVF VFVQAALSTF VRFFPRVKAR YDYSLLIFIL TFALISVSGF REEQVVKLTH KRISTVIIGG LSCVIISIFV CPVWAGQDLH SLIASNFEKL
201: SFFLLGNSFH YVSSDLNSIT LLRKIKSWRL ADFGDKYCEV VENDGAKEVD KRKKDFDNYK SVLNSKSNEE SLANFAKWEP GHGQFRFRHP WKQYLAVGEL
301: IRQCAYRIHA LNSYLNADNQ VSVDIKKKLG EPLRRMSLES GKAMKEMSIS LKKMTKPSSS DLHVQNAKSA CKSLTNLLNS GILKEVEPLE LVSLLTAISL
401: LIDIINLTEK ILESLHELAT AAKFKNKIEH PLFSEKPKAK SFVSVRSIKC HDDHVVIIIE DDGNNDDTSK NDNGSKEVSI HEKHEDDDTH VDARCVSCGH
501: TSVCVK
Arabidopsis Description
ALMT7Aluminum-activated malate transporter 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIN1]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.