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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra010995.1-P Field mustard cytosol, peroxisome, plasma membrane 98.42 97.06
CDY24400 Canola cytosol, peroxisome, plasma membrane 96.32 94.82
AT1G25480.1 Thale cress cytosol, peroxisome, plasma membrane 85.79 89.23
CDY42102 Canola peroxisome 85.44 89.19
CDX84992 Canola peroxisome 85.09 88.83
CDY24338 Canola plasma membrane 45.26 71.47
VIT_18s0122g00020.t01 Wine grape endoplasmic reticulum, extracellular 23.51 63.21
KRG90790 Soybean cytosol 59.82 61.66
KRH75405 Soybean mitochondrion 58.77 60.47
KRH35972 Soybean cytosol, peroxisome, plasma membrane 58.95 59.89
KRH70564 Soybean mitochondrion 57.72 59.71
KRH45244 Soybean mitochondrion, peroxisome, plasma membrane, plastid 58.42 59.68
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 39.82 58.81
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 54.21 58.52
GSMUA_Achr10P... Banana plasma membrane 54.04 57.36
PGSC0003DMT400069527 Potato plasma membrane 55.26 56.05
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 54.91 54.82
VIT_17s0000g03850.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 56.49 54.76
KRH60327 Soybean cytosol, golgi, plasma membrane 55.09 54.51
OQU85465 Sorghum golgi 49.3 54.25
KRH48465 Soybean mitochondrion 55.44 53.02
KRH39212 Soybean mitochondrion 55.44 52.84
KRH60330 Soybean plasma membrane 35.26 51.94
KRH41621 Soybean golgi, peroxisome, plasma membrane 52.11 51.56
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 50.7 50.97
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 14.56 50.61
CDY26161 Canola mitochondrion 49.47 50.36
CDY19211 Canola mitochondrion 49.65 50.18
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 53.16 50.17
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 34.04 50.0
TraesCS7B01G116000.1 Wheat endoplasmic reticulum, plastid, vacuole 51.23 49.74
TraesCS7A01G208700.1 Wheat endoplasmic reticulum, plasma membrane, plastid 51.23 49.66
TraesCS7D01G211100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 51.23 49.66
Zm00001d010130_P001 Maize cytosol 16.67 48.97
PGSC0003DMT400033766 Potato cytosol 45.44 48.23
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 49.3 48.12
Zm00001d017928_P001 Maize plasma membrane 49.82 47.73
TraesCS7D01G221900.2 Wheat cytosol, peroxisome, plasma membrane 48.07 47.16
TraesCS7A01G220200.1 Wheat cytosol, peroxisome, vacuole 47.72 46.82
TraesCS7B01G127200.2 Wheat cytosol, peroxisome, vacuole 47.72 46.74
CDY18521 Canola plasma membrane 54.39 46.62
HORVU7Hr1G045290.1 Barley extracellular, peroxisome, vacuole 47.37 46.39
Zm00001d045696_P001 Maize mitochondrion, plastid 49.82 46.18
EER89585 Sorghum plastid 49.47 45.78
HORVU6Hr1G072900.3 Barley peroxisome 47.54 44.06
CDX81872 Canola peroxisome, plastid, vacuole 21.58 42.56
TraesCS6B01G321600.1 Wheat plasma membrane 47.19 40.7
Zm00001d044350_P001 Maize mitochondrion 13.51 36.67
CDX97484 Canola plasma membrane 8.07 33.82
VIT_01s0011g03290.t01 Wine grape plasma membrane 64.39 32.51
CDY52054 Canola cytosol, peroxisome, plasma membrane 24.04 31.57
CDX87698 Canola plasma membrane 16.32 31.1
CDX74373 Canola plasma membrane 25.26 30.19
CDY51721 Canola plasma membrane 24.74 29.94
CDY07155 Canola cytosol, peroxisome, plasma membrane 24.56 29.85
CDY01945 Canola plasma membrane 24.74 29.56
CDY01943 Canola plasma membrane 24.74 29.56
CDX90432 Canola cytosol 26.84 29.14
CDX97239 Canola plasma membrane 24.56 28.93
CDY01507 Canola cytosol 26.49 28.87
CDY01048 Canola cytosol, golgi, plasma membrane 24.21 28.28
CDY08504 Canola cytosol, golgi, plasma membrane 24.21 28.22
CDX77675 Canola cytosol, golgi, plasma membrane 26.49 27.86
CDY63048 Canola plasma membrane 26.84 27.77
CDX91864 Canola plasma membrane 24.56 27.72
CDY59584 Canola cytosol, endoplasmic reticulum, plasma membrane 25.79 27.22
CDX97483 Canola plasma membrane 22.28 26.85
CDY31147 Canola plasma membrane 22.46 25.96
CDY31146 Canola cytosol, golgi, plasma membrane 22.46 25.7
CDX95060 Canola cytosol, golgi, plasma membrane 22.81 25.59
CDX93562 Canola cytosol, golgi, plasma membrane 22.63 25.39
CDX97489 Canola cytosol, golgi, plasma membrane 22.46 25.25
CDY30563 Canola plasma membrane 22.63 25.24
CDX77103 Canola golgi 22.63 25.24
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 54.21 23.86
CDX97487 Canola plasma membrane 15.79 23.32
CDX87700 Canola cytosol 10.18 21.8
Os02t0673000-01 Rice golgi, mitochondrion, plasma membrane 8.07 20.35
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 11.4 20.25
CDX97488 Canola endoplasmic reticulum 0.0 0.0
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:CDY36105EnsemblPlantsGene:GSBRNA2T00059944001GO:A0A078HCJ3GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTncoils:CoilPANTHER:PTHR31086
PANTHER:PTHR31086:SF20PFAM:PF11744ProteinID:CDY36105ProteinID:CDY36105.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EE7C5AUniProt:A0A078HCJ3MapMan:24.3.11:::
Description
BnaA08g19430DBnaA08g19430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCJ3]
Coordinates
chrLK032367:-:139507..142094
Molecular Weight (calculated)
64061.6 Da
IEP (calculated)
6.351
GRAVY (calculated)
-0.023
Length
570 amino acids
Sequence
(BLAST)
001: MASNSELFGD QNREPFLPRK PCSDFGGGFN DSSLFLDDRR SKFSCFRFFS DGIVASWMAL YDVAAKLYEM GLSDRRKVYF AVKMGMALAL CSFVIYLKEP
101: LADASKYAVW AILTVVVVFE YSIGATLVKG FNRAIGTFSA GGLALGIARL SVLAGDFEEE VIIISIFLAG FCASYLKLYP AMKSYEYAFR VFLLTFCIVL
201: VSGNNTREFF STAYYRFLLI LVGASICLGV NIFILPIWAG EDLHKLVVKN FKSVANSLEG CVNGYLQCVE YERIPSKILT YQASDDPLYS GYRSVVQSTS
301: QEDSLLDFAV WEPPHGPYRT FHHPWANYVK LSGAVRHCAF MVMAMHGCIL SEIQAAPEKR QAFRQELQRV GNEGAKVLRL FGEKVEKMEK LSAGNILKEV
401: QRAAEELQMK IDSNSFLLVN SESWAAMKEK ADAEQAEQNY HEAKDDETKV IQSLSQIWDT NHNHHHHQSP HTGNDSHLWM NREHWPSVSF IGGSMINEIE
501: SKVYESASSL SLATFASLLI EFVARLQNVV NAFEELSTKA DFKEPVSETE KNIVKAGFWT RLRSCFSSGD
Best Arabidopsis Sequence Match ( AT1G25480.1 )
(BLAST)
001: MADQTREAFL SRKACSDFGF NDSNIIDDRR SKFRCFRFCS DGITASWKAL YDIGAKLYEM GRSDRRKVYF SVKMGMALAL CSFVIYLKEP LRDASKYAVW
101: AILTVVVVFE YSIGATLVKG FNRAIGTLSA GGLALGIARL SVSAGEFEEL IIIISIFIAG FSASYLKLYP AMKSYEYAFR VFLLTYCIVL VSGNNSRDFF
201: STAYYRFLLI LVGAGICLGV NIFILPIWAG EDLHKLVVKN FKSVANSLEG CVNGYLQCVE YERIPSKILT YQASDDPLYS GYRSVVQSTS QEDSLLDFAV
301: WEPPHGPYKT FHHPWANYVK LSGAVRHCAF MVMAMHGCIL SEIQAAPEKR QAFRQELQRV GNEGAKVLRL FGEKVEKMEK LSPGNVLKDV QRAAEELQMK
401: IDSNSFLLVN SESWAAMKEK AEAEEAQQNY HEAKDDESKV IQSLSQIWDN NNNPHHQNQH AGNDSQLWIS TESMMLRNRE NWPSVSFIGG SMINEIESKV
501: YESASSLSLA TFASLLIEFV ARLQNIVNAY EELSTKADFK EQVSETRI
Arabidopsis Description
ALMT4Aluminum-activated malate transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6L8]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.