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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • golgi 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, golgi, plasma membrane
BaCelLo:cytosol
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY01945 Canola plasma membrane 99.79 99.79
CDX97239 Canola plasma membrane 97.69 96.28
CDY51721 Canola plasma membrane 84.07 85.14
CDX74373 Canola plasma membrane 84.49 84.49
AT4G00910.1 Thale cress plasma membrane 85.74 84.33
CDY07155 Canola cytosol, peroxisome, plasma membrane 82.81 84.22
CDX91864 Canola plasma membrane 85.95 81.19
VIT_15s0046g00130.t01 Wine grape plasma membrane 54.93 53.04
Solyc01g096140.2.1 Tomato cytosol, peroxisome, plasma membrane 53.67 51.41
CDX97484 Canola plasma membrane 14.05 49.26
HORVU2Hr1G095430.2 Barley plasma membrane 12.58 49.18
PGSC0003DMT400000350 Potato endoplasmic reticulum, golgi 36.69 48.34
Zm00001d017570_P001 Maize cytosol, peroxisome, plasma membrane 47.59 46.42
GSMUA_Achr2P09980_001 Banana cytosol 42.56 46.35
EES05741 Sorghum cytosol 48.22 46.0
Zm00001d017571_P001 Maize peroxisome 46.96 45.9
GSMUA_Achr9P00890_001 Banana cytosol, peroxisome, plasma membrane 44.03 45.45
GSMUA_AchrUn_... Banana cytosol 44.03 45.26
TraesCS6A01G255200.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 45.91 45.06
TraesCS6D01G236500.1 Wheat plasma membrane 45.91 45.06
TraesCS2B01G420600.1 Wheat cytosol 44.65 44.65
Os02t0673100-02 Rice cytosol 47.59 44.42
TraesCS6B01G270300.1 Wheat cytosol, nucleus, peroxisome 45.28 44.26
EES12682 Sorghum cytosol 43.82 42.39
TraesCS2A01G402400.2 Wheat cytosol 44.65 42.18
Os04t0567200-01 Rice plasma membrane 45.28 42.11
Zm00001d026102_P001 Maize plasma membrane 44.23 41.7
TraesCS2D01G399700.2 Wheat cytosol 44.03 41.58
CDY52054 Canola cytosol, peroxisome, plasma membrane 35.22 38.71
CDY31146 Canola cytosol, golgi, plasma membrane 37.11 35.54
CDX97489 Canola cytosol, golgi, plasma membrane 37.53 35.31
CDX95060 Canola cytosol, golgi, plasma membrane 37.32 35.04
CDX93562 Canola cytosol, golgi, plasma membrane 37.11 34.84
CDX97483 Canola plasma membrane 34.38 34.67
CDY08504 Canola cytosol, golgi, plasma membrane 35.43 34.56
CDY01048 Canola cytosol, golgi, plasma membrane 35.22 34.43
CDX87698 Canola plasma membrane 20.96 33.44
CDY31147 Canola plasma membrane 34.38 33.27
CDX97487 Canola plasma membrane 26.21 32.38
CDX77103 Canola golgi 33.75 31.51
CDY30563 Canola plasma membrane 33.75 31.51
CDY01507 Canola cytosol 33.54 30.59
CDX90432 Canola cytosol 33.54 30.48
HORVU7Hr1G081320.3 Barley peroxisome 40.88 29.86
Os06t0331900-01 Rice cytosol, peroxisome, plasma membrane 41.72 29.79
CDX77675 Canola cytosol, golgi, plasma membrane 33.54 29.52
TraesCS7B01G241400.1 Wheat peroxisome 41.09 29.34
TraesCS7D01G338100.1 Wheat peroxisome 40.46 29.02
CDY63048 Canola plasma membrane 33.33 28.86
Zm00001d046029_P001 Maize plastid 40.25 28.49
TraesCS7A01G341500.1 Wheat cytosol, peroxisome, plasma membrane 39.62 28.42
EER89808 Sorghum cytosol, endoplasmic reticulum, peroxisome, plastid 40.04 28.38
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 18.87 28.04
CDY59584 Canola cytosol, endoplasmic reticulum, plasma membrane 31.66 27.96
CDY24338 Canola plasma membrane 20.96 27.7
CDY26161 Canola mitochondrion 29.14 24.82
CDY36105 Canola cytosol, peroxisome, plasma membrane 29.56 24.74
CDY19211 Canola mitochondrion 28.93 24.47
CDY42102 Canola peroxisome 27.88 24.36
CDY24400 Canola cytosol, peroxisome, plasma membrane 29.56 24.35
CDX84992 Canola peroxisome 27.67 24.18
CDX81872 Canola peroxisome, plastid, vacuole 14.26 23.53
CDY18521 Canola plasma membrane 29.35 21.05
CDX87700 Canola cytosol 11.11 19.92
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 29.35 10.81
CDX97488 Canola endoplasmic reticulum 0.0 0.0
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:CDY01943EnsemblPlantsGene:GSBRNA2T00113211001GO:A0A078EQY2GO:GO:0006810GO:GO:0008150GO:GO:0015743
InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF4PFAM:PF11744ProteinID:CDY01943ProteinID:CDY01943.1
SEG:segTMHMM:TMhelixUniParc:UPI0004EE82DBMapMan:24.3.11::
Description
BnaC02g27840D
Coordinates
chrLK031930:-:643195..645108
Molecular Weight (calculated)
53048.4 Da
IEP (calculated)
8.278
GRAVY (calculated)
0.035
Length
477 amino acids
Sequence
(BLAST)
001: MASKVEAGKL EWRISVDNGT TERLVPAYGP SKRIFLWLKG FVMKVILEQI AKSMRNIWRI GADDPAKAVH CLKVGLALSL VSIFYYMRPL YDGVGGNAMW
101: AIMTVVVVFE STVGATFSKC VNRVVATILA GTLGIAVHWV ATRSGKAEIF VTACSVFLFA FTATYSRFVP SFKSRFDYGA MIFILTFSLV SVGGYRVDKL
201: FDMAQQRAST IAIGTSICIV ITVFLCPIWA GSQLNRLVQC NFVKLADSLD GCVAEYFKKK DVSTNENEDE ETNKKLQGFK CVLNSKGTEE AMANLARWEP
301: AHGSFNFRHP WQQYVKIGAA MRRCAYCLEN LSICMNYETE APDQVKNHFG EACMSLSSAS SKILRELADM IKNTRKSSKM DYLVFDMNSA VQELQETLKI
401: VPIEINRPED DVKSEKDKEG DRTMAMSLHE ILPVATLVSL LIENAARIQT TVEAVDELAN LADFKQDSKK KTGGNNA
Best Arabidopsis Sequence Match ( AT4G00910.1 )
(BLAST)
001: MATQEAGKLE WRISVDNGTT ERLVPRSGLS KRIFLWLKDL VMKVIMERVA KFMRKAWRIG ADDPAKVVHC LKVGLALSLV SIFYYMRPLY DGVGGNAMWA
101: IMTVVVVFES NVGATFCKCV NRVVATILAG SLGIAVHWVA TQSGKAEVFV IGCSVFLFAF AATYSRFVPS FKARFDYGAM IFILTFSLVS VGGYRVDKLV
201: ELAQQRVSTI AIGTSICIII TVFFCPIWAG SQLHRLIERN LEKLADSLDG CVAEYFKENE VSTNRNEDEN TNMKLQGFKC VLNSKGTEEA MANLARWEPA
301: HGSFNFRHPW KLYVKIGAAM RRCAYCLENL SICINYETEA PDQVKNHFGE ACMKLSSASS KILRELADMM KNTRKSSKMD FLVFDMNSAV QELQETLKNV
401: PIETNKPEEV PSEEENKVDS EERTTSMSLH EVLPVATLVS LLIENAARIQ TAVEAVDELA NLADFEQDSK KKTGDNNTKQ PPLSS
Arabidopsis Description
Aluminium activated malate transporter family protein [Source:TAIR;Acc:AT4G00910]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.