CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022048.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	99.25	48.89
CDY59584	Canola	cytosol, endoplasmic reticulum, plasma membrane	99.25	48.89
AT5G46600.1	Thale cress	cytosol, endoplasmic reticulum, plasma membrane	75.56	37.29
CDX90432	Canola	cytosol	63.16	32.0
CDY01507	Canola	cytosol	62.78	31.93
CDY63048	Canola	plasma membrane	61.28	29.58
CDX77675	Canola	cytosol, golgi, plasma membrane	59.77	29.34
PGSC0003DMT400052884	Potato	cytosol	50.75	25.09
Solyc08g006990.1.1	Tomato	cytosol, peroxisome, plasma membrane	50.0	25.0
KRH77215	Soybean	cytosol, peroxisome, plasma membrane	50.38	24.95
KRH58213	Soybean	cytosol	48.87	24.76
KRH28280	Soybean	peroxisome	49.62	24.58
KRH04324	Soybean	cytosol	48.5	23.93
EER90182	Sorghum	mitochondrion	45.49	22.87
KRG90599	Soybean	plasma membrane	40.98	21.98
KRG90598	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	42.86	21.97
TraesCS1D01G194000.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	43.61	21.93
Os10t0572100-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane, plastid	43.61	21.93
KRG90597	Soybean	golgi, mitochondrion	42.11	21.88
TraesCS1A01G189900.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	43.23	21.7
TraesCS1B01G192000.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	42.86	21.55
Solyc06g061100.2.1	Tomato	plasma membrane	42.11	21.46
HORVU1Hr1G049820.21	Barley	endoplasmic reticulum, peroxisome	43.98	21.43
KRH36161	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	41.35	21.36
Zm00001d036652_P001	Maize	mitochondrion	43.61	20.68
GSMUA_Achr4P21730_001	Banana	plasma membrane	46.62	19.87
KRH04321	Soybean	golgi	46.62	16.96
VIT_02s0012g01030.t01	Wine grape	plasma membrane	46.24	16.69
KRH36162	Soybean	endoplasmic reticulum, plasma membrane, plastid	41.73	13.65
PGSC0003DMT400005384	Potato	plasma membrane	32.71	13.04
CDX97485	Canola	endoplasmic reticulum, extracellular, plasma membrane	14.66	12.15
CDY01943	Canola	plasma membrane	19.92	11.11
CDY01945	Canola	plasma membrane	19.92	11.11
CDX97239	Canola	plasma membrane	19.92	10.95
CDX74373	Canola	plasma membrane	19.55	10.9
CDY26161	Canola	mitochondrion	22.56	10.71
CDY19211	Canola	mitochondrion	22.56	10.64
CDY42102	Canola	peroxisome	21.8	10.62
CDY51721	Canola	plasma membrane	18.8	10.62
CDX91864	Canola	plasma membrane	19.92	10.49
CDY07155	Canola	cytosol, peroxisome, plasma membrane	18.42	10.45
CDX84992	Canola	peroxisome	21.43	10.44
CDY24400	Canola	cytosol, peroxisome, plasma membrane	22.18	10.19
CDY36105	Canola	cytosol, peroxisome, plasma membrane	21.8	10.18
CDY18521	Canola	plasma membrane	24.44	9.77
CDY52054	Canola	cytosol, peroxisome, plasma membrane	15.79	9.68
CDX97487	Canola	plasma membrane	13.53	9.33
CDY31147	Canola	plasma membrane	16.54	8.92
CDX97489	Canola	cytosol, golgi, plasma membrane	16.92	8.88
CDY31146	Canola	cytosol, golgi, plasma membrane	16.54	8.84
CDY08504	Canola	cytosol, golgi, plasma membrane	15.79	8.59
CDX93562	Canola	cytosol, golgi, plasma membrane	16.17	8.46
CDX97483	Canola	plasma membrane	15.04	8.46
CDY30563	Canola	plasma membrane	16.17	8.41
CDX77103	Canola	golgi	16.17	8.41
CDY01048	Canola	cytosol, golgi, plasma membrane	15.41	8.4
CDX81872	Canola	peroxisome, plastid, vacuole	9.02	8.3
CDX95060	Canola	cytosol, golgi, plasma membrane	15.79	8.27
CDY24338	Canola	plasma membrane	7.14	5.26
CDX95521	Canola	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	24.81	5.1
CDX87698	Canola	plasma membrane	3.38	3.01
CDX97484	Canola	plasma membrane	0.0	0.0
CDY18522	Canola	cytosol, golgi, nucleus, plastid	0.0	0.0
CDX97488	Canola	endoplasmic reticulum	0.0	0.0

Protein Annotations

EnsemblPlants:CDX87700	EnsemblPlantsGene:GSBRNA2T00146723001	GO:A0A078DEP3	GO:GO:0006810	GO:GO:0008150	GO:GO:0015743
InterPro:ALMT	PANTHER:PTHR31086	PANTHER:PTHR31086:SF2	PFAM:PF11744	ProteinID:CDX87700	ProteinID:CDX87700.1
UniParc:UPI0004EE75BA	MapMan:35.1	:	:	:	:

Description

BnaC02g32490D

Coordinates

chrLK031851:+:270576..271638

Molecular Weight (calculated)

29722.7 Da

IEP (calculated)

9.018

GRAVY (calculated)

-0.269

Length

266 amino acids

Sequence
(BLAST)

001: MYASWEPRHT LRCNKFPSQQ YIKIGSVLRK FGHTVVALHG CLQTEIQTPR SIRTLFKDPC VRLAGEICKV LSELSESILN KRHCSPEILS DNLEVALKDL
101: NAAIKSQPKL FLGSNLHSDI TNKHLNRNVS YYNDSNNVDG NVLSQTTPQN VTVSQARFNS TVSLSSFMGQ ASHRKSVNKP GPVGEKRRFR KQLSKAAVMK
201: SLEFSEALPF AAFASLLVEM VARLGTVIDE VEELGSISCF KEYDKIVDRT DVEVRIEKPV DLVVGD

Best Arabidopsis Sequence Match ( AT4G17970.1 )
(BLAST)

001: MSNKVHVGSL EMEEGLSKTK WMVLEPSEKI KKIPKRLWNV GKEDPRRVIH ALKVGLSLTL VSLLYLMEPL FKGIGSNAIW AVMTVVVVLE FSAGATLCKG
101: LNRGLGTLIA GSLAFFIEFV ANDSGKVLRA IFIGTAVFII GAAATYIRFI PYIKKNYDYG VVIFLLTFNL ITVSSYRVDS VINIAHDRFY TIAVGCGICL
201: FMSLLVFPIW SGEDLHKTTV GKLQGLSRSI EACVDEYFEE KEKEKTDSKD RIYEGYQAVL DSKSTDETLA LYANWEPRHT LRCHRFPCQQ YVKVGAVLRQ
301: FGYTVVALHG CLQTEIQTPR SVRALFKDPC VRLAGEVCKA LTELADSISN HRHCSPEILS DHLHVALQDL NSAIKSQPKL FLGSNLHRHN NKHQNGSISN
401: NKHHQRNSSN SGKDLNGDVS LQNTETGTRK ITETGSRQGQ NGAVSLSSFR TDTSALMEYR RSFKNSNSEM SAAGERRMLR PQLSKIAVMT SLEFSEALPF
501: AAFASLLVEM VARLDNVIEE VEELGRIASF KEYDNKRDQT ADDVRCENPA NVTISVGAAE

Arabidopsis Description

ALMT12Aluminum-activated malate transporter 12 [Source:UniProtKB/Swiss-Prot;Acc:O49696]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.