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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra002062.1-P Field mustard cytosol, peroxisome, plasma membrane 98.89 63.86
KRH60330 Soybean plasma membrane 53.74 50.13
AT2G17470.2 Thale cress cytosol 73.96 47.68
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 50.69 47.16
CDX84992 Canola peroxisome 69.81 46.15
CDY42102 Canola peroxisome 69.53 45.97
CDY36105 Canola cytosol, peroxisome, plasma membrane 71.47 45.26
VIT_18s0122g00020.t01 Wine grape endoplasmic reticulum, extracellular 26.04 44.34
CDY24400 Canola cytosol, peroxisome, plasma membrane 70.91 44.21
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 18.28 40.24
KRG90790 Soybean cytosol 59.56 38.88
KRH75405 Soybean mitochondrion 59.56 38.81
KRH45244 Soybean mitochondrion, peroxisome, plasma membrane, plastid 59.56 38.53
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 55.68 38.07
KRH70564 Soybean mitochondrion 57.89 37.93
KRH35972 Soybean cytosol, peroxisome, plasma membrane 58.73 37.79
GSMUA_Achr10P... Banana plasma membrane 54.29 36.5
VIT_17s0000g03850.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 57.62 35.37
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 55.68 35.2
PGSC0003DMT400069527 Potato plasma membrane 54.29 34.88
KRH60327 Soybean cytosol, golgi, plasma membrane 55.4 34.72
KRH39212 Soybean mitochondrion 56.23 33.95
OQU85465 Sorghum golgi 48.48 33.78
KRH48465 Soybean mitochondrion 55.68 33.72
KRH41621 Soybean golgi, peroxisome, plasma membrane 53.46 33.51
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 51.8 32.98
CDY26161 Canola mitochondrion 50.14 32.32
TraesCS7B01G116000.1 Wheat endoplasmic reticulum, plastid, vacuole 52.35 32.2
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 34.35 32.12
CDY19211 Canola mitochondrion 50.14 32.09
TraesCS7A01G208700.1 Wheat endoplasmic reticulum, plasma membrane, plastid 52.08 31.97
TraesCS7D01G211100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 52.08 31.97
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 53.19 31.79
CDX97484 Canola plasma membrane 11.91 31.62
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 50.69 31.34
TraesCS7D01G221900.2 Wheat cytosol, peroxisome, plasma membrane 49.31 30.64
Zm00001d017928_P001 Maize plasma membrane 50.42 30.59
CDX87698 Canola plasma membrane 25.21 30.43
TraesCS7B01G127200.2 Wheat cytosol, peroxisome, vacuole 49.03 30.41
TraesCS7A01G220200.1 Wheat cytosol, peroxisome, vacuole 48.75 30.29
HORVU7Hr1G045290.1 Barley extracellular, peroxisome, vacuole 48.75 30.24
CDY18521 Canola plasma membrane 55.12 29.92
EER89585 Sorghum plastid 50.14 29.38
Zm00001d045696_P001 Maize mitochondrion, plastid 49.86 29.27
HORVU6Hr1G072900.3 Barley peroxisome 49.58 29.11
PGSC0003DMT400033766 Potato cytosol 41.27 27.75
TraesCS6B01G321600.1 Wheat plasma membrane 49.58 27.08
CDX81872 Canola peroxisome, plastid, vacuole 20.5 25.61
CDY52054 Canola cytosol, peroxisome, plasma membrane 30.75 25.58
Zm00001d010130_P001 Maize cytosol 13.3 24.74
CDY01048 Canola cytosol, golgi, plasma membrane 31.58 23.36
CDY08504 Canola cytosol, golgi, plasma membrane 31.58 23.31
CDY51721 Canola plasma membrane 27.7 21.23
CDY07155 Canola cytosol, peroxisome, plasma membrane 27.42 21.11
CDY01945 Canola plasma membrane 27.7 20.96
CDY01943 Canola plasma membrane 27.7 20.96
CDX74373 Canola plasma membrane 27.7 20.96
CDX97239 Canola plasma membrane 27.7 20.66
VIT_01s0011g03290.t01 Wine grape plasma membrane 64.54 20.64
CDX97483 Canola plasma membrane 26.59 20.3
CDX91864 Canola plasma membrane 28.25 20.2
CDY01507 Canola cytosol 29.09 20.08
CDX90432 Canola cytosol 29.09 20.0
Os02t0673000-01 Rice golgi, mitochondrion, plasma membrane 12.47 19.91
CDY63048 Canola plasma membrane 30.19 19.78
CDY31146 Canola cytosol, golgi, plasma membrane 27.15 19.68
CDX77675 Canola cytosol, golgi, plasma membrane 29.36 19.56
CDX95060 Canola cytosol, golgi, plasma membrane 27.42 19.49
CDY59584 Canola cytosol, endoplasmic reticulum, plasma membrane 29.09 19.44
CDX97489 Canola cytosol, golgi, plasma membrane 27.15 19.33
CDX93562 Canola cytosol, golgi, plasma membrane 27.15 19.29
CDY31147 Canola plasma membrane 26.32 19.27
CDX77103 Canola golgi 26.04 18.4
CDY30563 Canola plasma membrane 25.76 18.2
CDX97487 Canola plasma membrane 17.17 16.06
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 55.68 15.52
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 11.63 13.08
Zm00001d044350_P001 Maize mitochondrion 6.93 11.9
CDX87700 Canola cytosol 5.26 7.14
CDX97488 Canola endoplasmic reticulum 0.0 0.0
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:CDY24338EnsemblPlantsGene:GSBRNA2T00026542001GO:A0A078GI85GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF20
PFAM:PF11744ProteinID:CDY24338ProteinID:CDY24338.1SEG:segTMHMM:TMhelixUniParc:UPI0004EE8FE8
UniProt:A0A078GI85MapMan:24.3.11::::
Description
BnaA07g02630DBnaA07g02630D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GI85]
Coordinates
chrLK032157:-:232211..236449
Molecular Weight (calculated)
40440.4 Da
IEP (calculated)
8.908
GRAVY (calculated)
0.294
Length
361 amino acids
Sequence
(BLAST)
001: MWQRPVKDLG NFGCGRSILK DNKVLFNMEK IAGNMGSGPE QSREGLLSRK RYSGFGFNDS RRRFCGICNL WHSDRRKLFF AVKMGMALAI CSFLIFLKEP
101: LHAASKFYVW AILTVVVVFE YSVGATLVKG FNRALGTFSA GGLALGIARL SVLSGDFEQF IIIIFILLAG FSASYLKLHP AMKAYEYAFR VFLLTYCIVL
201: VSGNNTGEFF NTAYYRSLFI VLGATICLVV NIFISPIWAG EDLHKLVATN FKSVANSLEG CVNGYLQCVE YERIPSKILI YQASDDPLYS GYRSAVQSTS
301: EEDSLLEFAR WEPPHGPYRT LNHPWINYVK LSGAVRHCAF TVMAMHGCIL SEIQVPFITI S
Best Arabidopsis Sequence Match ( AT1G25480.1 )
(BLAST)
001: MADQTREAFL SRKACSDFGF NDSNIIDDRR SKFRCFRFCS DGITASWKAL YDIGAKLYEM GRSDRRKVYF SVKMGMALAL CSFVIYLKEP LRDASKYAVW
101: AILTVVVVFE YSIGATLVKG FNRAIGTLSA GGLALGIARL SVSAGEFEEL IIIISIFIAG FSASYLKLYP AMKSYEYAFR VFLLTYCIVL VSGNNSRDFF
201: STAYYRFLLI LVGAGICLGV NIFILPIWAG EDLHKLVVKN FKSVANSLEG CVNGYLQCVE YERIPSKILT YQASDDPLYS GYRSVVQSTS QEDSLLDFAV
301: WEPPHGPYKT FHHPWANYVK LSGAVRHCAF MVMAMHGCIL SEIQAAPEKR QAFRQELQRV GNEGAKVLRL FGEKVEKMEK LSPGNVLKDV QRAAEELQMK
401: IDSNSFLLVN SESWAAMKEK AEAEEAQQNY HEAKDDESKV IQSLSQIWDN NNNPHHQNQH AGNDSQLWIS TESMMLRNRE NWPSVSFIGG SMINEIESKV
501: YESASSLSLA TFASLLIEFV ARLQNIVNAY EELSTKADFK EQVSETRI
Arabidopsis Description
ALMT4Aluminum-activated malate transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6L8]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.