Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31146 | Canola | cytosol, golgi, plasma membrane | 88.95 | 90.56 |
| CDX97484 | Canola | plasma membrane | 24.26 | 90.44 |
| CDX93562 | Canola | cytosol, golgi, plasma membrane | 87.97 | 87.8 |
| CDX95060 | Canola | cytosol, golgi, plasma membrane | 87.77 | 87.6 |
| CDX97485 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 55.23 | 87.23 |
| AT1G08440.1 | Thale cress | cytosol, golgi, plasma membrane | 83.83 | 84.83 |
| CDX97483 | Canola | plasma membrane | 69.03 | 74.0 |
| CDY31147 | Canola | plasma membrane | 71.2 | 73.23 |
| CDY30563 | Canola | plasma membrane | 65.88 | 65.36 |
| CDX77103 | Canola | golgi | 65.88 | 65.36 |
| CDX97487 | Canola | plasma membrane | 48.72 | 63.99 |
| VIT_06s0009g00450.t01 | Wine grape | plasma membrane | 48.72 | 51.57 |
| Solyc11g068970.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 46.94 | 50.96 |
| PGSC0003DMT400050498 | Potato | cytosol, peroxisome, plasma membrane | 42.01 | 48.74 |
| KRH30357 | Soybean | plasma membrane | 46.35 | 48.65 |
| KRH25315 | Soybean | plasma membrane | 46.15 | 48.65 |
| CDY52054 | Canola | cytosol, peroxisome, plasma membrane | 38.46 | 44.93 |
| GSMUA_Achr8P30390_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 36.88 | 44.63 |
| GSMUA_Achr6P35650_001 | Banana | plastid | 39.45 | 44.15 |
| CDY01048 | Canola | cytosol, golgi, plasma membrane | 40.63 | 42.21 |
| TraesCS2B01G314100.1 | Wheat | plasma membrane | 37.67 | 42.16 |
| CDY08504 | Canola | cytosol, golgi, plasma membrane | 40.43 | 41.92 |
| KXG26278 | Sorghum | cytosol, peroxisome, plasma membrane | 36.49 | 41.48 |
| TraesCS2A01G297900.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 33.33 | 40.62 |
| Os04t0417000-01 | Rice | cytosol, plastid, vacuole | 36.09 | 40.22 |
| HORVU2Hr1G073840.3 | Barley | peroxisome, plasma membrane | 37.28 | 39.79 |
| TraesCS2D01G295900.1 | Wheat | plasma membrane | 37.67 | 39.46 |
| Zm00001d003749_P001 | Maize | plasma membrane | 36.09 | 39.44 |
| Zm00001d025373_P001 | Maize | cytosol, peroxisome, plasma membrane | 34.12 | 39.41 |
| OQU81544 | Sorghum | peroxisome | 33.73 | 38.0 |
| CDY07155 | Canola | cytosol, peroxisome, plasma membrane | 34.71 | 37.53 |
| CDY01943 | Canola | plasma membrane | 35.31 | 37.53 |
| CDY01945 | Canola | plasma membrane | 35.31 | 37.53 |
| CDX74373 | Canola | plasma membrane | 35.11 | 37.32 |
| OQU81543 | Sorghum | cytosol, peroxisome, plasma membrane | 31.36 | 37.24 |
| CDX97239 | Canola | plasma membrane | 35.11 | 36.78 |
| CDY51721 | Canola | plasma membrane | 34.12 | 36.73 |
| TraesCS4D01G283600.1 | Wheat | plasma membrane | 33.53 | 36.48 |
| CDX87698 | Canola | plasma membrane | 21.3 | 36.12 |
| CDX91864 | Canola | plasma membrane | 34.91 | 35.05 |
| OQU75600 | Sorghum | cytosol | 13.61 | 33.66 |
| CDY01507 | Canola | cytosol | 30.77 | 29.83 |
| CDX90432 | Canola | cytosol | 30.57 | 29.52 |
| CDY59584 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 29.78 | 27.96 |
| CDX77675 | Canola | cytosol, golgi, plasma membrane | 29.19 | 27.31 |
| CDY63048 | Canola | plasma membrane | 29.59 | 27.22 |
| CDY24338 | Canola | plasma membrane | 19.33 | 27.15 |
| CDY26161 | Canola | mitochondrion | 26.04 | 23.57 |
| CDY19211 | Canola | mitochondrion | 26.04 | 23.4 |
| CDY42102 | Canola | peroxisome | 24.65 | 22.89 |
| CDX84992 | Canola | peroxisome | 24.65 | 22.89 |
| CDY24400 | Canola | cytosol, peroxisome, plasma membrane | 25.84 | 22.63 |
| CDY36105 | Canola | cytosol, peroxisome, plasma membrane | 25.25 | 22.46 |
| CDY18521 | Canola | plasma membrane | 26.23 | 20.0 |
| CDX81872 | Canola | peroxisome, plastid, vacuole | 11.24 | 19.72 |
| CDX87700 | Canola | cytosol | 8.88 | 16.92 |
| CDX95521 | Canola | endoplasmic reticulum, mitochondrion, nucleus, plasma membrane | 27.22 | 10.66 |
| CDX97488 | Canola | endoplasmic reticulum | 0.2 | 7.14 |
| CDY18522 | Canola | cytosol, golgi, nucleus, plastid | 0.79 | 0.58 |
Protein Annotations
| EnsemblPlants:CDX97489 | EnsemblPlantsGene:GSBRNA2T00104682001 | GO:A0A078E9S8 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0015743 |
| InterPro:ALMT | PANTHER:PTHR31086 | PANTHER:PTHR31086:SF22 | PFAM:PF11744 | ProteinID:CDX97489 | ProteinID:CDX97489.1 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EF3D78 | MapMan:24.3.11 | : | : |
Description
BnaC08g13540D
Coordinates
chrLK031899:+:1231953..1234582
Molecular Weight (calculated)
56811.8 Da
IEP (calculated)
6.677
GRAVY (calculated)
-0.143
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKVGEIWRE GRRVGKEDPR RIVHAFKVGL ALAFVSSFYY YQPLYDNFGV NAMWAVMTVV VVFEFSVGAT LGKGINRAVA TLVAGGLGVG AHHLASLSGP
101: TIEPILLAIF VFVQAALSTF VRFFPRVKAR YDYGILIFIL TFSLISVSGF REDEILDLAH KRLSTVIMGG VSCVLISIFI CPVWAGQDLH SLLAFNFDTL
201: SHFLQEFGEE YFEATDDGDV KEVEKRRRNL QRYKIVLNSK SNEEALANFA KWEPRHGQFR FRHPWKQYLA VAALLRQCAY RIDALNSYIN SDFQIPTDVK
301: KKLEEPLRRM SSESGKSMKE ASISLKKMRK SSSYDIHVDH VLNSQSACKD LTTLLKSGIL NDVEPLHMIA LTTTVSLLID IVNLTEKVSE SVHELASAAR
401: FKNKKKSTVS SEKSDSVSTV RAMPIKSQDD HVVTILCDDD MSHTVDQSRG ESSVDSCHHV AIEIDDDDSV HEKHEDGEMH EHTSCVSCGQ TNASDVLDSD
501: NKRTSYN
101: TIEPILLAIF VFVQAALSTF VRFFPRVKAR YDYGILIFIL TFSLISVSGF REDEILDLAH KRLSTVIMGG VSCVLISIFI CPVWAGQDLH SLLAFNFDTL
201: SHFLQEFGEE YFEATDDGDV KEVEKRRRNL QRYKIVLNSK SNEEALANFA KWEPRHGQFR FRHPWKQYLA VAALLRQCAY RIDALNSYIN SDFQIPTDVK
301: KKLEEPLRRM SSESGKSMKE ASISLKKMRK SSSYDIHVDH VLNSQSACKD LTTLLKSGIL NDVEPLHMIA LTTTVSLLID IVNLTEKVSE SVHELASAAR
401: FKNKKKSTVS SEKSDSVSTV RAMPIKSQDD HVVTILCDDD MSHTVDQSRG ESSVDSCHHV AIEIDDDDSV HEKHEDGEMH EHTSCVSCGQ TNASDVLDSD
501: NKRTSYN
001: MEKVREIVRE GRRVGKEDPR RVVHAFKVGL ALALVSSFYY YQPLYDNFGV NAMWAVMTVV VVFEFSVGAT LGKGLNRAVA TLVAGGLGIG AHHLASLSGP
101: TVEPILLAIF VFVLAALSTF VRFFPRVKAR YDYGVLIFIL TFALISVSGF REDEILDLAH KRLSTVIMGG VSCVLISIFV CPVWAGQDLH SLLASNFDTL
201: SHFLQEFGDE YFEATEDGDI KEVEKRRRNL ERYKSVLNSK SNEEALANFA KWEPRHGQFR FRHPWRQYLA VGALLRQSAY RIDALNSNIN SDMQIPMDIK
301: KKIEEPLRRM SSESGKSMKE VSISLKNMTI SSSFDIHVVN SQSACKTLST LLKSGILNDV EPLQMISLMT TVSLLIDIVN LTEKISESVH ELASAAKFKN
401: KKKPSKSNSG SIGQAMPNKS HDDDDHVVTI LGDVDTSNNV DQSQSHGEIS VDSCHHVTIK INDDDSIHDK NEDGDIHVHT NRVSCDHTNA SDLLDSGVKK
501: N
101: TVEPILLAIF VFVLAALSTF VRFFPRVKAR YDYGVLIFIL TFALISVSGF REDEILDLAH KRLSTVIMGG VSCVLISIFV CPVWAGQDLH SLLASNFDTL
201: SHFLQEFGDE YFEATEDGDI KEVEKRRRNL ERYKSVLNSK SNEEALANFA KWEPRHGQFR FRHPWRQYLA VGALLRQSAY RIDALNSNIN SDMQIPMDIK
301: KKIEEPLRRM SSESGKSMKE VSISLKNMTI SSSFDIHVVN SQSACKTLST LLKSGILNDV EPLQMISLMT TVSLLIDIVN LTEKISESVH ELASAAKFKN
401: KKKPSKSNSG SIGQAMPNKS HDDDDHVVTI LGDVDTSNNV DQSQSHGEIS VDSCHHVTIK INDDDSIHDK NEDGDIHVHT NRVSCDHTNA SDLLDSGVKK
501: N
Arabidopsis Description
ALMT2Aluminum-activated malate transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE8]
SUBAcon: [plasma membrane,golgi,cytosol]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.