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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:
  • nucleus 1
  • plastid 3
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid, vacuole
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:plastid
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G297900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 74.29 81.25
TraesCS2B01G314100.1 Wheat plasma membrane 79.56 79.91
HORVU2Hr1G073840.3 Barley peroxisome, plasma membrane 77.8 74.53
TraesCS2D01G295900.1 Wheat plasma membrane 79.12 74.38
KXG26278 Sorghum cytosol, peroxisome, plasma membrane 71.65 73.09
Zm00001d003749_P001 Maize plasma membrane 70.99 69.61
Zm00001d025373_P001 Maize cytosol, peroxisome, plasma membrane 66.81 69.25
TraesCS4D01G283600.1 Wheat plasma membrane 66.37 64.81
OQU81544 Sorghum peroxisome 63.52 64.22
OQU81543 Sorghum cytosol, peroxisome, plasma membrane 60.22 64.17
OQU75600 Sorghum cytosol 28.79 63.9
GSMUA_Achr6P35650_001 Banana plastid 62.42 62.69
GSMUA_Achr8P30390_001 Banana cytosol, endoplasmic reticulum, plasma membrane 57.36 62.29
CDX97484 Canola plasma membrane 15.82 52.94
VIT_08s0105g00250.t01 Wine grape cytosol, golgi, plasma membrane 48.35 45.36
VIT_06s0009g00450.t01 Wine grape plasma membrane 47.69 45.3
CDY52054 Canola cytosol, peroxisome, plasma membrane 42.86 44.93
Solyc11g068970.1.1 Tomato cytosol, peroxisome, plasma membrane 45.49 44.33
KRG96263 Soybean nucleus 45.93 43.27
KRH68006 Soybean golgi, peroxisome, plasma membrane 46.15 43.21
VIT_06s0009g00480.t01 Wine grape golgi, peroxisome, plasma membrane 47.03 43.06
KRH25315 Soybean plasma membrane 45.49 43.04
VIT_06s0080g00170.t01 Wine grape golgi, peroxisome, plasma membrane 47.69 42.89
PGSC0003DMT400050498 Potato cytosol, peroxisome, plasma membrane 41.1 42.79
KRH30357 Soybean plasma membrane 45.05 42.44
Bra038672.1-P Field mustard plasma membrane 44.62 41.43
KRH26686 Soybean golgi, peroxisome, plasma membrane 39.56 41.38
CDY08504 Canola cytosol, golgi, plasma membrane 44.4 41.31
Bra034819.1-P Field mustard cytosol, golgi, plasma membrane 44.4 41.22
CDY01048 Canola cytosol, golgi, plasma membrane 44.18 41.19
AT3G11680.2 Thale cress plasma membrane 43.52 40.41
VIT_06s0080g00200.t01 Wine grape plasma membrane 25.05 40.28
PGSC0003DMT400085620 Potato endoplasmic reticulum, plasma membrane, vacuole 27.25 40.0
Solyc10g081890.1.1 Tomato nucleus 41.98 39.96
PGSC0003DMT400047767 Potato plasma membrane 37.36 39.81
CDX97483 Canola plasma membrane 41.1 39.53
KRH26685 Soybean plasma membrane 38.68 39.37
Solyc11g071350.1.1 Tomato nucleus 38.02 38.62
PGSC0003DMT400072326 Potato golgi 34.07 38.08
Os02t0673100-02 Rice cytosol 42.64 37.96
CDY31147 Canola plasma membrane 40.88 37.73
AT1G08440.1 Thale cress cytosol, golgi, plasma membrane 41.54 37.72
Bra030725.1-P Field mustard plasma membrane 40.66 37.6
CDX95060 Canola cytosol, golgi, plasma membrane 41.98 37.6
Solyc06g074100.1.1 Tomato plasma membrane 38.24 37.26
CDX93562 Canola cytosol, golgi, plasma membrane 41.32 37.01
Bra018625.1-P Field mustard cytosol, golgi, plasma membrane 41.32 37.01
Bra030726.1-P Field mustard cytosol, golgi, plasma membrane 40.44 36.95
CDY31146 Canola cytosol, golgi, plasma membrane 40.44 36.95
Bra034339.1-P Field mustard golgi 39.78 36.79
AT1G08430.1 Thale cress golgi 39.56 36.51
CDX97489 Canola cytosol, golgi, plasma membrane 40.22 36.09
Os04t0567200-01 Rice plasma membrane 40.66 36.06
AT2G27240.1 Thale cress golgi 39.78 35.77
CDY30563 Canola plasma membrane 39.78 35.42
CDX77103 Canola golgi 39.78 35.42
CDX97487 Canola plasma membrane 29.89 35.23
PGSC0003DMT400089827 Potato endoplasmic reticulum, golgi 31.65 35.12
Solyc01g007080.2.1 Tomato peroxisome 36.04 34.53
Os02t0673000-01 Rice golgi, mitochondrion, plasma membrane 15.82 31.86
Os10t0572100-01 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 32.97 28.36
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 20.0 28.35
Os06t0331900-01 Rice cytosol, peroxisome, plasma membrane 41.32 28.14
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 23.52 27.58
PGSC0003DMT400086999 Potato cytosol, endoplasmic reticulum, plasma membrane 39.78 27.22
PGSC0003DMT400087967 Potato cytosol 39.56 27.07
Solyc01g007090.1.1 Tomato cytosol 36.48 26.69
Os01t0737500-01 Rice cytosol, plasma membrane, vacuole 18.02 26.45
Os01t0221600-00 Rice golgi, peroxisome, plasma membrane 28.13 24.43
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 29.01 22.6
CDX97488 Canola endoplasmic reticulum 0.0 0.0
Protein Annotations
MapMan:24.3.11EntrezGene:4335813EMBL:AK063428InterPro:ALMTProteinID:BAF14682.1ProteinID:BAS89164.1
ProteinID:CAD40928.3ProteinID:CAE01530.2ProteinID:EAZ30706.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0006810GO:GO:0008150
GO:GO:0009705GO:GO:0015140GO:GO:0015743GO:GO:0016020GO:GO:0016021GO:GO:0071423
EnsemblPlantsGene:Os04g0417000EnsemblPlants:Os04t0417000-01PFAM:PF11744PANTHER:PTHR31086PANTHER:PTHR31086:SF8UniProt:Q7X7K7
TMHMM:TMhelixUniParc:UPI00001B0C02RefSeq:XP_015633562.1SEG:seg::
Description
Similar to Aluminum-activated malate transporter. (Os04t0417000-01)
Coordinates
chr4:-:20592809..20596141
Molecular Weight (calculated)
48685.0 Da
IEP (calculated)
8.313
GRAVY (calculated)
0.319
Length
455 amino acids
Sequence
(BLAST)
001: MQSAAVETTP AAAAAAENGG QVVVVVGGGW VDGCWARVRA AVEVAGRWVG GLARKVGGIA ADDPRRVAHS LKVGLALTLV SVLYYVTPLF KGFGVSTLWA
101: VLTVVVVMEY TVGGTLSKGL NRAFATLVAG FIAVGAHQVA NRCGAQGEPI LLAVFVFLLA SAATFSRFIP EIKARYDYGV TIFILTFSLV AVSSYRVEEL
201: IQLAHQRFST IVVGVATCLC TTIFVMPVWA GEDLHKLAAG NLDKLADFLE GMETECFGES ATSESLEGKA FLQAYKSILN SKATEDSLCN FARWEPGHGK
301: FSFKHPWSQY QKIGALSRQC ASSMEAMASY VITLTKSQYP EANPELSFKV RTACSEMSSH SAQALRELSA ALRTMTVPST TSMSAAIKAA KTLRSELSED
401: KALLQVMHVA VTASLLSDLV TQVKKIAESV DNLARLACFK VPEKSQKEVA INIMS
Best Arabidopsis Sequence Match ( AT3G11680.1 )
(BLAST)
001: MDLNAQEKKA GFFQRLQDFP SKLKDDVTKR VKNVQKFAKD DPRRIIHSMK VGVALTLVSL LYYVRPLYIS FGVTGMWAIL TVVVVFEFTV GGTLSKGLNR
101: GFATLIAGAL GVGAVHLARF FGHQGEPIVL GILVFSLGAA ATFSRFFPRI KQRYDYGALI FILTFSFVAI SGYRTDEILI MAYQRLSTIL IGGTICILVS
201: IFICPVWAGE DLHKMIANNI NKLAKYLEGF EGEYFQPEKI SKETSSCVRE YKSILTSKST EDSLANLARW EPGHGRFRLR HPWKKYLKIA GLVRQCAVHL
301: EILNGYVLSN DKAPQEFESK IQEPITTMSR EVGEALKAIA KSIKTMRNDS ACVNAHIDNS KKAIKNLKIA LKSSYPETYK DLLEIIPGVT MASILIEVVN
401: CVEKIYEAVE EFSGLAHFKE TLDSKLSAEI GQHQLLHRGC VKPVLDGDNE KEDNSSCHVL ITVHDEGYLP TATAKNVLGA EKTRVDIV
Arabidopsis Description
Aluminum activated malate transporter family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRV2]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.