Factsheet for Bra030726.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, cytosol

Predictor Summary:

nucleus 2
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, golgi, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	secretory
PTS1:	peroxisome
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY31146	Canola	cytosol, golgi, plasma membrane	100.0	100.0
Bra018625.1-P	Field mustard	cytosol, golgi, plasma membrane	86.35	84.65
AT1G08440.1	Thale cress	cytosol, golgi, plasma membrane	83.33	82.83
Bra030725.1-P	Field mustard	plasma membrane	71.69	72.56
Bra034339.1-P	Field mustard	golgi	66.06	66.87
Solyc11g068970.1.1	Tomato	cytosol, peroxisome, plasma membrane	49.0	52.25
VIT_06s0009g00450.t01	Wine grape	plasma membrane	49.0	50.94
PGSC0003DMT400050498	Potato	cytosol, peroxisome, plasma membrane	44.38	50.57
KRH30357	Soybean	plasma membrane	47.99	49.48
KRH25315	Soybean	plasma membrane	47.59	49.27
GSMUA_Achr8P30390_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	38.35	45.58
GSMUA_Achr6P35650_001	Banana	plastid	40.56	44.59
TraesCS2B01G314100.1	Wheat	plasma membrane	38.76	42.6
Bra038672.1-P	Field mustard	plasma membrane	41.57	42.24
KXG26278	Sorghum	cytosol, peroxisome, plasma membrane	37.75	42.15
Bra034819.1-P	Field mustard	cytosol, golgi, plasma membrane	40.96	41.63
TraesCS2A01G297900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	34.34	41.11
Os04t0417000-01	Rice	cytosol, plastid, vacuole	36.95	40.44
HORVU2Hr1G073840.3	Barley	peroxisome, plasma membrane	38.35	40.21
TraesCS2D01G295900.1	Wheat	plasma membrane	38.76	39.88
Zm00001d003749_P001	Maize	plasma membrane	37.15	39.87
Zm00001d025373_P001	Maize	cytosol, peroxisome, plasma membrane	35.14	39.86
OQU81544	Sorghum	peroxisome	34.94	38.67
OQU81543	Sorghum	cytosol, peroxisome, plasma membrane	32.53	37.94
TraesCS4D01G283600.1	Wheat	plasma membrane	34.54	36.91
Bra037402.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.54	36.52
Bra008542.1-P	Field mustard	plasma membrane	32.13	35.32
OQU75600	Sorghum	cytosol	14.06	34.15
Bra000933.1-P	Field mustard	plasma membrane	34.54	32.58
Bra022048.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	30.52	28.15
Bra012627.1-P	Field mustard	cytosol	30.12	28.04
Bra025011.1-P	Field mustard	plasma membrane	29.72	25.17
Bra025906.1-P	Field mustard	mitochondrion	26.31	22.55
Bra024742.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	25.1	22.05
Bra010995.1-P	Field mustard	cytosol, peroxisome, plasma membrane	25.5	21.97
Bra002062.1-P	Field mustard	cytosol, peroxisome, plasma membrane	24.5	21.82
Bra037581.1-P	Field mustard	golgi, mitochondrion, nucleus, plasma membrane	27.91	10.51

Protein Annotations

EnsemblPlants:Bra030726.1	EnsemblPlants:Bra030726.1-P	EnsemblPlantsGene:Bra030726	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015743	GO:GO:0016020	GO:GO:0016021	InterPro:ALMT	PANTHER:PTHR31086	PANTHER:PTHR31086:SF22
PFAM:PF11744	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002546B85	UniProt:M4EPK6	MapMan:24.3.11

Description

AT1G08440 (E=7e-187) | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0005 (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1); malate transmembrane transporter (TAIR:AT1G08430.1); Has 377 Blast hits to 376 proteins in 91 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 4; Plants - 211; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).

Coordinates

chrA08:-:20635145..20638342

Molecular Weight (calculated)

55620.9 Da

IEP (calculated)

7.366

GRAVY (calculated)

-0.094

Length

498 amino acids

Sequence
(BLAST)

001: MEKVREIWKE GRRVGKEDPR RIVHSFKVGL ALALVSSFYY YQPLYDNFGV NAMWAVMTVV VVFEFSVGAT LGKGINRAVA TLVAGGLGVG AHHLASLSGP
101: TVEPILLAIF VFAQAALSTF VRFFPRVKAR YDYGILIFIL TFSLISVSGF REDEILDLAH KRLSTVIMGG VSCVLISIFI CPVWAGQDLH SLLASNFDTL
201: SRFLQEFGDE YFEETDDGDV KEVEKRRRNL EKYKCVLNSK SNEEALANFA KWEPRHGQFR FRHPWKQYLA VAALLRQCAY RMDALNSYIN SDFQIPMDIK
301: KKLEEPLRKM SSESGKSMKE ASISLKKMRK SSSSDIHVLN SQSACKDLST LLKSGILNDV EPLQMIALTT TVSLLIDIVN LTEKVSQSVH ELASAARFKN
401: KKKSTVSSKK SDSVSTVRAM PTKSQDDHVV TILCDDDLSN TVDQSCGESS VDSCHHVAIK IDDDDDSVHE KHEDDTALVL RLLQCQVNLK QESAVSSL

Best Arabidopsis Sequence Match ( AT1G08440.1 )
(BLAST)

001: MEKVREIVRE GRRVGKEDPR RVVHAFKVGL ALALVSSFYY YQPLYDNFGV NAMWAVMTVV VVFEFSVGAT LGKGLNRAVA TLVAGGLGIG AHHLASLSGP
101: TVEPILLAIF VFVLAALSTF VRFFPRVKAR YDYGVLIFIL TFALISVSGF REDEILDLAH KRLSTVIMGG VSCVLISIFV CPVWAGQDLH SLLASNFDTL
201: SHFLQEFGDE YFEATEDGDI KEVEKRRRNL ERYKSVLNSK SNEEALANFA KWEPRHGQFR FRHPWRQYLA VGALLRQSAY RIDALNSNIN SDMQIPMDIK
301: KKIEEPLRRM SSESGKSMKE VSISLKNMTI SSSFDIHVVN SQSACKTLST LLKSGILNDV EPLQMISLMT TVSLLIDIVN LTEKISESVH ELASAAKFKN
401: KKKPSKSNSG SIGQAMPNKS HDDDDHVVTI LGDVDTSNNV DQSQSHGEIS VDSCHHVTIK INDDDSIHDK NEDGDIHVHT NRVSCDHTNA SDLLDSGVKK
501: N

Arabidopsis Description

ALMT2Aluminum-activated malate transporter 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE8]
SUBAcon: [plasma membrane,golgi,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.