Factsheet for Bra012627.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX90432	Canola	cytosol	96.45	98.29
AT4G17970.1	Thale cress	cytosol	92.52	88.39
Bra022048.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	68.41	67.78
Bra025011.1-P	Field mustard	plasma membrane	71.22	64.8
Solyc08g006990.1.1	Tomato	cytosol, peroxisome, plasma membrane	63.74	64.1
PGSC0003DMT400052884	Potato	cytosol	63.74	63.38
KRH77215	Soybean	cytosol, peroxisome, plasma membrane	62.99	62.76
KRH28280	Soybean	peroxisome	62.99	62.76
KRH58213	Soybean	cytosol	58.32	59.43
KRH04324	Soybean	cytosol	58.88	58.44
Solyc06g061100.2.1	Tomato	plasma membrane	56.64	58.05
Os10t0572100-01	Rice	endoplasmic reticulum, peroxisome, plasma membrane, plastid	56.45	57.09
KRG90599	Soybean	plasma membrane	52.9	57.06
KRG90598	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	55.33	57.03
EER90182	Sorghum	mitochondrion	56.07	56.71
TraesCS1D01G194000.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	55.14	55.77
TraesCS1A01G189900.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	55.14	55.66
TraesCS1B01G192000.1	Wheat	endoplasmic reticulum, peroxisome, plasma membrane	54.95	55.58
KRH36161	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	52.9	54.95
KRG90597	Soybean	golgi, mitochondrion	52.15	54.49
HORVU1Hr1G049820.21	Barley	endoplasmic reticulum, peroxisome	55.51	54.4
Zm00001d036652_P001	Maize	mitochondrion	54.77	52.23
GSMUA_Achr4P21730_001	Banana	plasma membrane	57.76	49.52
VIT_02s0012g01030.t01	Wine grape	plasma membrane	60.37	43.83
KRH04321	Soybean	golgi	55.33	40.49
PGSC0003DMT400005384	Potato	plasma membrane	46.73	37.48
KRH36162	Soybean	endoplasmic reticulum, plasma membrane, plastid	52.71	34.69
Bra037402.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.79	32.7
Bra038672.1-P	Field mustard	plasma membrane	29.72	32.45
Bra008542.1-P	Field mustard	plasma membrane	26.92	31.79
Bra034819.1-P	Field mustard	cytosol, golgi, plasma membrane	28.22	30.82
Bra000933.1-P	Field mustard	plasma membrane	29.91	30.3
Bra034339.1-P	Field mustard	golgi	27.85	30.28
Bra030726.1-P	Field mustard	cytosol, golgi, plasma membrane	28.04	30.12
Bra030725.1-P	Field mustard	plasma membrane	27.48	29.88
Bra018625.1-P	Field mustard	cytosol, golgi, plasma membrane	28.22	29.72
Bra025906.1-P	Field mustard	mitochondrion	29.35	27.02
Bra024742.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	28.41	26.81
Bra010995.1-P	Field mustard	cytosol, peroxisome, plasma membrane	28.41	26.3
Bra002062.1-P	Field mustard	cytosol, peroxisome, plasma membrane	26.17	25.04
Bra037581.1-P	Field mustard	golgi, mitochondrion, nucleus, plasma membrane	29.53	11.94

Protein Annotations

MapMan:24.3.11	InterPro:ALMT	EnsemblPlantsGene:Bra012627	EnsemblPlants:Bra012627.1	EnsemblPlants:Bra012627.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0006810	GO:GO:0008150	GO:GO:0008509
GO:GO:0009987	GO:GO:0010118	GO:GO:0012505	GO:GO:0015743	GO:GO:0016020	GO:GO:0016021
GO:GO:0098656	UniProt:M4D817	PFAM:PF11744	PANTHER:PTHR31086	PANTHER:PTHR31086:SF2	TMHMM:TMhelix
UniParc:UPI0002540A10	SEG:seg	:	:	:	:

Description

AT4G17970 (E=1e-270) | unknown protein

Coordinates

chrA03:+:23073887..23076162

Molecular Weight (calculated)

59467.7 Da

IEP (calculated)

8.409

GRAVY (calculated)

-0.087

Length

535 amino acids

Sequence
(BLAST)

001: MSNKVHVGST EMEEGLRNNK WKVLEPSEKI KKIPKRLWDV GKEDPRRVIH ALKVGISLTL VSLLYLMEPL FKDIGSNAIW AVMTVVVVLE FSAGATLCKG
101: LNRGLGTLIA GSLAFFIEFV ANDSGKGLRA IFIGTAVFII GAAATYIRFI PYIKKNYDYG VVIFLLTFNL ITVSSYRVDS VITIAHDRFY TIAIGCGICL
201: FMSLLVFPIW SGEDLHKTTV GKPPGLSRSI EACVSEYFEE KEKETSDSKD RIYEGYQAVL DSKSIDETLP RHTIRCHRFP CQQYVKVGAV LRQFGYTVVA
301: LHGCLQTEIQ TPRSVRALFK DPCVRLAGEV CKALSELADS ISNHRHCSPE ILSDHLHVAL QDLNSAIKSQ PKLFLGSNLH RHNNKHQNAV SQRNRANDVS
401: NKTTESTGSR QGQSGAVSLS SFRTDTSALM EYRRSFKNNN RSETTSAAGE RRMLRPQLSK IAVMTSLEFS EALPFAAFAS LLVEMVARLD NVIEEVEELG
501: RIACFKEYDN TRDPTADDVR CEKPANVVIS VGAAE

Best Arabidopsis Sequence Match ( AT4G17970.1 )
(BLAST)

001: MSNKVHVGSL EMEEGLSKTK WMVLEPSEKI KKIPKRLWNV GKEDPRRVIH ALKVGLSLTL VSLLYLMEPL FKGIGSNAIW AVMTVVVVLE FSAGATLCKG
101: LNRGLGTLIA GSLAFFIEFV ANDSGKVLRA IFIGTAVFII GAAATYIRFI PYIKKNYDYG VVIFLLTFNL ITVSSYRVDS VINIAHDRFY TIAVGCGICL
201: FMSLLVFPIW SGEDLHKTTV GKLQGLSRSI EACVDEYFEE KEKEKTDSKD RIYEGYQAVL DSKSTDETLA LYANWEPRHT LRCHRFPCQQ YVKVGAVLRQ
301: FGYTVVALHG CLQTEIQTPR SVRALFKDPC VRLAGEVCKA LTELADSISN HRHCSPEILS DHLHVALQDL NSAIKSQPKL FLGSNLHRHN NKHQNGSISN
401: NKHHQRNSSN SGKDLNGDVS LQNTETGTRK ITETGSRQGQ NGAVSLSSFR TDTSALMEYR RSFKNSNSEM SAAGERRMLR PQLSKIAVMT SLEFSEALPF
501: AAFASLLVEM VARLDNVIEE VEELGRIASF KEYDNKRDQT ADDVRCENPA NVTISVGAAE

Arabidopsis Description

ALMT12Aluminum-activated malate transporter 12 [Source:UniProtKB/Swiss-Prot;Acc:O49696]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.