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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • peroxisome 2
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:extracellular, peroxisome, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36105 Canola cytosol, peroxisome, plasma membrane 97.06 98.42
CDY24400 Canola cytosol, peroxisome, plasma membrane 95.85 95.68
AT1G25480.1 Thale cress cytosol, peroxisome, plasma membrane 85.81 90.51
Bra024742.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 88.24 89.95
Bra002062.1-P Field mustard cytosol, peroxisome, plasma membrane 69.72 72.09
VIT_18s0122g00020.t01 Wine grape endoplasmic reticulum, extracellular 23.36 63.68
KRG90790 Soybean cytosol 59.34 62.03
KRH75405 Soybean mitochondrion 58.3 60.83
KRH35972 Soybean cytosol, peroxisome, plasma membrane 58.48 60.25
KRH45244 Soybean mitochondrion, peroxisome, plasma membrane, plastid 57.96 60.04
KRH70564 Soybean mitochondrion 57.09 59.89
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 53.98 59.09
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 39.45 59.07
GSMUA_Achr10P... Banana plasma membrane 53.11 57.17
PGSC0003DMT400069527 Potato plasma membrane 54.67 56.23
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 54.33 54.99
VIT_17s0000g03850.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.71 54.76
KRH60327 Soybean cytosol, golgi, plasma membrane 54.5 54.69
OQU85465 Sorghum golgi 48.62 54.25
KRH39212 Soybean mitochondrion 55.19 53.34
KRH48465 Soybean mitochondrion 54.67 53.02
KRH60330 Soybean plasma membrane 34.78 51.94
KRH41621 Soybean golgi, peroxisome, plasma membrane 51.73 51.91
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 50.35 51.32
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 14.53 51.22
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 33.74 50.26
TraesCS7B01G116000.1 Wheat endoplasmic reticulum, plastid, vacuole 50.87 50.09
TraesCS7D01G211100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 50.87 50.0
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 52.25 50.0
TraesCS7A01G208700.1 Wheat endoplasmic reticulum, plasma membrane, plastid 50.87 50.0
Bra025906.1-P Field mustard mitochondrion 49.83 49.57
Zm00001d010130_P001 Maize cytosol 16.26 48.45
PGSC0003DMT400033766 Potato cytosol 44.64 48.04
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 48.44 47.95
Zm00001d017928_P001 Maize plasma membrane 48.96 47.56
TraesCS7D01G221900.2 Wheat cytosol, peroxisome, plasma membrane 47.23 46.99
HORVU7Hr1G045290.1 Barley extracellular, peroxisome, vacuole 47.06 46.74
TraesCS7A01G220200.1 Wheat cytosol, peroxisome, vacuole 46.89 46.64
TraesCS7B01G127200.2 Wheat cytosol, peroxisome, vacuole 46.89 46.56
Zm00001d045696_P001 Maize mitochondrion, plastid 49.31 46.34
EER89585 Sorghum plastid 48.79 45.78
HORVU6Hr1G072900.3 Barley peroxisome 47.06 44.23
TraesCS6B01G321600.1 Wheat plasma membrane 46.71 40.85
Zm00001d044350_P001 Maize mitochondrion 13.15 36.19
VIT_01s0011g03290.t01 Wine grape plasma membrane 64.01 32.77
Bra037402.1-P Field mustard cytosol, peroxisome, plasma membrane 23.88 29.3
Bra038672.1-P Field mustard plasma membrane 24.39 28.78
Bra008542.1-P Field mustard plasma membrane 22.49 28.7
Bra034819.1-P Field mustard cytosol, golgi, plasma membrane 24.22 28.57
Bra012627.1-P Field mustard cytosol 26.3 28.41
Bra000933.1-P Field mustard plasma membrane 24.91 27.27
Bra022048.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 25.43 27.22
Bra034339.1-P Field mustard golgi 22.32 26.22
Bra025011.1-P Field mustard plasma membrane 26.47 26.02
Bra030726.1-P Field mustard cytosol, golgi, plasma membrane 21.97 25.5
Bra030725.1-P Field mustard plasma membrane 21.63 25.41
Bra018625.1-P Field mustard cytosol, golgi, plasma membrane 22.15 25.2
Bra037581.1-P Field mustard golgi, mitochondrion, nucleus, plasma membrane 53.29 23.28
Os02t0673000-01 Rice golgi, mitochondrion, plasma membrane 7.96 20.35
Protein Annotations
EnsemblPlants:Bra010995.1EnsemblPlants:Bra010995.1-PEnsemblPlantsGene:Bra010995GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTncoils:CoilPANTHER:PTHR31086
PANTHER:PTHR31086:SF20PFAM:PF11744SEG:segTMHMM:TMhelixUniParc:UPI0002545E44UniProt:M4D3E1
MapMan:24.3.11:::::
Description
AT1G25480 (E=1e-266) | unknown protein
Coordinates
chrA08:+:17490880..17493482
Molecular Weight (calculated)
65211.2 Da
IEP (calculated)
6.399
GRAVY (calculated)
-0.033
Length
578 amino acids
Sequence
(BLAST)
001: MASNSELFGD QNREPFLPRK PCSDFGGGFN DSSLFLDDRR SKFRCFRFFS DGIVASWMAL YDVAAKLYEM GRSDRRKVYF AVKMGMALAL CSFVIYLKEP
101: LADASKYAVW AILTVVVVFE YSIGATLVKG FNRAIGTFSA GGLALGIARL SVLAGDFEEE VIIISIFLAG FCASYLKLYP AMKSYEYAFR VFLLTFCIVL
201: VSGNNTREFF STAYYRFLLI LIGASICLGV NIFILPIWAG EDLHKLVVKN FKSVANSLEG CVNGYLQCVE YERIPSKILT YQASDDPLYS GYRSVVQSTS
301: QEDSLLDFAV WEPPHGPYRT FHHPWAIYVK LSGAVRHCAF MVMAMHGCIL SEIQAAPEKR QAFRQELQRV GNEGAKVLRL FGEKVEKMEK LTPGNILKEV
401: QRAAEELQMK IDSNSFLLVN SESWAAMKEK ADAEQAEQNY HEAKDDETKV IQSLSQIWDT NHNHHHHQSP HTGNDSQLWM STESMMFRNR EHWPSFSFIG
501: GSMINEIESK VYESASSLSL ATFASLLIEF VARLQNVVNA FEELSTKADF KEPVSETEKN IVKAGFWTRL MSCFSSGD
Best Arabidopsis Sequence Match ( AT1G25480.1 )
(BLAST)
001: MADQTREAFL SRKACSDFGF NDSNIIDDRR SKFRCFRFCS DGITASWKAL YDIGAKLYEM GRSDRRKVYF SVKMGMALAL CSFVIYLKEP LRDASKYAVW
101: AILTVVVVFE YSIGATLVKG FNRAIGTLSA GGLALGIARL SVSAGEFEEL IIIISIFIAG FSASYLKLYP AMKSYEYAFR VFLLTYCIVL VSGNNSRDFF
201: STAYYRFLLI LVGAGICLGV NIFILPIWAG EDLHKLVVKN FKSVANSLEG CVNGYLQCVE YERIPSKILT YQASDDPLYS GYRSVVQSTS QEDSLLDFAV
301: WEPPHGPYKT FHHPWANYVK LSGAVRHCAF MVMAMHGCIL SEIQAAPEKR QAFRQELQRV GNEGAKVLRL FGEKVEKMEK LSPGNVLKDV QRAAEELQMK
401: IDSNSFLLVN SESWAAMKEK AEAEEAQQNY HEAKDDESKV IQSLSQIWDN NNNPHHQNQH AGNDSQLWIS TESMMLRNRE NWPSVSFIGG SMINEIESKV
501: YESASSLSLA TFASLLIEFV ARLQNIVNAY EELSTKADFK EQVSETRI
Arabidopsis Description
ALMT4Aluminum-activated malate transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6L8]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.