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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY36105 Canola cytosol, peroxisome, plasma membrane 94.82 96.32
Bra010995.1-P Field mustard cytosol, peroxisome, plasma membrane 95.68 95.85
AT1G25480.1 Thale cress cytosol, peroxisome, plasma membrane 85.49 90.33
CDY42102 Canola peroxisome 84.8 89.93
CDX84992 Canola peroxisome 84.63 89.74
CDY24338 Canola plasma membrane 44.21 70.91
VIT_18s0122g00020.t01 Wine grape endoplasmic reticulum, extracellular 22.8 62.26
KRG90790 Soybean cytosol 58.55 61.3
KRH75405 Soybean mitochondrion 58.2 60.83
KRH35972 Soybean cytosol, peroxisome, plasma membrane 58.55 60.43
KRH70564 Soybean mitochondrion 57.34 60.25
KRH45244 Soybean mitochondrion, peroxisome, plasma membrane, plastid 57.86 60.04
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 53.89 59.09
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 39.21 58.81
GSMUA_Achr10P... Banana plasma membrane 53.02 57.17
PGSC0003DMT400069527 Potato plasma membrane 54.4 56.05
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 54.06 54.82
KRH60327 Soybean cytosol, golgi, plasma membrane 54.4 54.69
OQU85465 Sorghum golgi 48.7 54.44
VIT_17s0000g03850.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 55.27 54.42
KRH39212 Soybean mitochondrion 54.58 52.84
KRH48465 Soybean mitochondrion 54.06 52.52
KRH60330 Soybean plasma membrane 34.89 52.2
KRH41621 Soybean golgi, peroxisome, plasma membrane 51.47 51.74
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 49.74 50.79
CDY26161 Canola mitochondrion 49.05 50.71
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 14.34 50.61
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 52.33 50.17
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 33.51 50.0
CDY19211 Canola mitochondrion 48.7 50.0
TraesCS7B01G116000.1 Wheat endoplasmic reticulum, plastid, vacuole 50.43 49.74
TraesCS7A01G208700.1 Wheat endoplasmic reticulum, plasma membrane, plastid 50.43 49.66
TraesCS7D01G211100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 50.26 49.49
Zm00001d010130_P001 Maize cytosol 16.41 48.97
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 48.36 47.95
Zm00001d017928_P001 Maize plasma membrane 49.22 47.9
PGSC0003DMT400033766 Potato cytosol 44.39 47.86
TraesCS7D01G221900.2 Wheat cytosol, peroxisome, plasma membrane 46.8 46.64
CDY18521 Canola plasma membrane 53.2 46.32
TraesCS7A01G220200.1 Wheat cytosol, peroxisome, vacuole 46.46 46.3
HORVU7Hr1G045290.1 Barley extracellular, peroxisome, vacuole 46.46 46.22
TraesCS7B01G127200.2 Wheat cytosol, peroxisome, vacuole 46.46 46.22
EER89585 Sorghum plastid 48.7 45.78
Zm00001d045696_P001 Maize mitochondrion, plastid 48.53 45.69
HORVU6Hr1G072900.3 Barley peroxisome 46.63 43.9
CDX81872 Canola peroxisome, plastid, vacuole 20.9 41.87
TraesCS6B01G321600.1 Wheat plasma membrane 46.29 40.54
Zm00001d044350_P001 Maize mitochondrion 13.3 36.67
CDX97484 Canola plasma membrane 8.12 34.56
VIT_01s0011g03290.t01 Wine grape plasma membrane 63.04 32.33
CDY52054 Canola cytosol, peroxisome, plasma membrane 24.01 32.03
CDX87698 Canola plasma membrane 16.41 31.77
CDX74373 Canola plasma membrane 24.87 30.19
CDY51721 Canola plasma membrane 24.52 30.15
CDY07155 Canola cytosol, peroxisome, plasma membrane 24.35 30.06
CDY01945 Canola plasma membrane 24.35 29.56
CDY01943 Canola plasma membrane 24.35 29.56
CDX90432 Canola cytosol 26.77 29.52
CDY01507 Canola cytosol 26.42 29.25
CDX97239 Canola plasma membrane 24.18 28.93
CDY01048 Canola cytosol, golgi, plasma membrane 24.18 28.69
CDY08504 Canola cytosol, golgi, plasma membrane 24.18 28.63
CDX77675 Canola cytosol, golgi, plasma membrane 26.42 28.23
CDY63048 Canola plasma membrane 26.77 28.13
CDX91864 Canola plasma membrane 24.35 27.92
CDY59584 Canola cytosol, endoplasmic reticulum, plasma membrane 25.91 27.78
CDX97483 Canola plasma membrane 21.93 26.85
CDY31146 Canola cytosol, golgi, plasma membrane 22.63 26.31
CDX95060 Canola cytosol, golgi, plasma membrane 22.97 26.18
CDX93562 Canola cytosol, golgi, plasma membrane 22.8 25.98
CDX97489 Canola cytosol, golgi, plasma membrane 22.63 25.84
CDY31147 Canola plasma membrane 21.93 25.76
CDY30563 Canola plasma membrane 22.63 25.64
CDX77103 Canola golgi 22.63 25.64
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 53.2 23.78
CDX97487 Canola plasma membrane 15.54 23.32
CDX87700 Canola cytosol 10.19 22.18
Os02t0673000-01 Rice golgi, mitochondrion, plasma membrane 8.12 20.8
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 11.4 20.56
CDX97488 Canola endoplasmic reticulum 0.0 0.0
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:CDY24400EnsemblPlantsGene:GSBRNA2T00026636001GO:A0A078GD16GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTncoils:CoilPANTHER:PTHR31086
PANTHER:PTHR31086:SF20PFAM:PF11744ProteinID:CDY24400ProteinID:CDY24400.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EE75BCUniProt:A0A078GD16MapMan:24.3.11:::
Description
BnaCnng04670DBnaCnng04670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GD16]
Coordinates
chrLK032158:-:184969..187628
Molecular Weight (calculated)
65177.1 Da
IEP (calculated)
6.742
GRAVY (calculated)
-0.041
Length
579 amino acids
Sequence
(BLAST)
001: MTSKAELFGD QTREPFLPRK PCSDFGSGFN DSSLFLDDRR SKFRCFRFFS DGIIASWMAV HDVAAKLYEM GRSDRRKVYF AVKMGMALAL CSFVIYLKEP
101: LADASKYAVW AILTVVVVFE YSIGATLVKG FNRAIGTISA GGLALGIARL SVLAGDFEEE VIIISIFLAG FCASYLKLYP AVKSYEYAFR VFLLTFCIVL
201: VSGNNTREFF STAYYRFLLI LVGASICLGV NIFILPIWAG EDLHKLVVKN FKSVANSLEG CVNGYLQCVE YERIPSKILT YQASDDPLYS GYRSVVQSTS
301: QEDSLLDFAV WEPPHGPYRT FHHPWANYVK LSGAVRHCAF MVMAMHGCIL SEIQAAPEKR QAFRQELQRV GNEGAKVLRL FGEKVEKMEK LSAGNILKEV
401: QRAAEELQMK IDSNSFLLVN SESWAAMKEK ADAEQAQQNY HEAKDDETKV IQSLSQIWDT NHNHHHHQSP QPGNDSQLCM STESMMFRNR EHWPSVSFIG
501: GSMINEIESK VYESASSLSL ATFASLLIEF VARLQNVVNA FEELSTKADF KEPVIETEKN NIVKAGYWTR IRSCFSSSD
Best Arabidopsis Sequence Match ( AT1G25480.1 )
(BLAST)
001: MADQTREAFL SRKACSDFGF NDSNIIDDRR SKFRCFRFCS DGITASWKAL YDIGAKLYEM GRSDRRKVYF SVKMGMALAL CSFVIYLKEP LRDASKYAVW
101: AILTVVVVFE YSIGATLVKG FNRAIGTLSA GGLALGIARL SVSAGEFEEL IIIISIFIAG FSASYLKLYP AMKSYEYAFR VFLLTYCIVL VSGNNSRDFF
201: STAYYRFLLI LVGAGICLGV NIFILPIWAG EDLHKLVVKN FKSVANSLEG CVNGYLQCVE YERIPSKILT YQASDDPLYS GYRSVVQSTS QEDSLLDFAV
301: WEPPHGPYKT FHHPWANYVK LSGAVRHCAF MVMAMHGCIL SEIQAAPEKR QAFRQELQRV GNEGAKVLRL FGEKVEKMEK LSPGNVLKDV QRAAEELQMK
401: IDSNSFLLVN SESWAAMKEK AEAEEAQQNY HEAKDDESKV IQSLSQIWDN NNNPHHQNQH AGNDSQLWIS TESMMLRNRE NWPSVSFIGG SMINEIESKV
501: YESASSLSLA TFASLLIEFV ARLQNIVNAY EELSTKADFK EQVSETRI
Arabidopsis Description
ALMT4Aluminum-activated malate transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6L8]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.