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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • peroxisome 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:peroxisome
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY42102 Canola peroxisome 87.04 87.36
Bra024742.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 90.15 87.13
CDX84992 Canola peroxisome 86.5 86.81
Bra010995.1-P Field mustard cytosol, peroxisome, plasma membrane 90.51 85.81
CDY36105 Canola cytosol, peroxisome, plasma membrane 89.23 85.79
CDY24400 Canola cytosol, peroxisome, plasma membrane 90.33 85.49
AT1G68600.1 Thale cress cytosol, golgi, plasma membrane 76.46 78.03
AT2G17470.2 Thale cress cytosol 71.9 70.36
VIT_18s0122g00020.t01 Wine grape endoplasmic reticulum, extracellular 23.91 61.79
KRG90790 Soybean cytosol 61.31 60.76
KRH75405 Soybean mitochondrion 61.31 60.65
KRH70564 Soybean mitochondrion 60.95 60.62
KRH45244 Soybean mitochondrion, peroxisome, plasma membrane, plastid 60.95 59.86
KRH35972 Soybean cytosol, peroxisome, plasma membrane 60.77 59.36
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 41.42 58.81
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 54.93 57.01
PGSC0003DMT400069527 Potato plasma membrane 56.93 55.52
GSMUA_Achr10P... Banana plasma membrane 53.65 54.75
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 56.75 54.47
VIT_17s0000g03850.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 57.3 53.4
KRH60327 Soybean cytosol, golgi, plasma membrane 55.84 53.12
OQU85465 Sorghum golgi 49.63 52.51
KRH60330 Soybean plasma membrane 36.86 52.2
KRH48465 Soybean mitochondrion 56.02 51.51
KRH39212 Soybean mitochondrion 56.2 51.51
AT3G18440.1 Thale cress plasma membrane 56.02 51.34
KRH41621 Soybean golgi, peroxisome, plasma membrane 53.47 50.87
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 35.77 50.52
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 51.82 50.09
AT1G18420.1 Thale cress mitochondrion 52.55 49.57
TraesCS7B01G116000.1 Wheat endoplasmic reticulum, plastid, vacuole 52.74 49.23
TraesCS7A01G208700.1 Wheat endoplasmic reticulum, plasma membrane, plastid 52.55 48.98
Zm00001d010130_P001 Maize cytosol 17.34 48.97
TraesCS7D01G211100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 52.37 48.81
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 53.47 48.51
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 14.23 47.56
PGSC0003DMT400033766 Potato cytosol 46.53 47.49
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 50.18 47.09
Zm00001d017928_P001 Maize plasma membrane 50.37 46.39
Zm00001d045696_P001 Maize mitochondrion, plastid 51.64 46.02
TraesCS7D01G221900.2 Wheat cytosol, peroxisome, plasma membrane 48.54 45.78
HORVU7Hr1G045290.1 Barley extracellular, peroxisome, vacuole 48.54 45.7
EER89585 Sorghum plastid 51.28 45.62
TraesCS7A01G220200.1 Wheat cytosol, peroxisome, vacuole 48.36 45.61
TraesCS7B01G127200.2 Wheat cytosol, peroxisome, vacuole 48.36 45.53
HORVU6Hr1G072900.3 Barley peroxisome 47.81 42.6
TraesCS6B01G321600.1 Wheat plasma membrane 47.63 39.49
Zm00001d044350_P001 Maize mitochondrion 13.87 36.19
VIT_01s0011g03290.t01 Wine grape plasma membrane 64.96 31.53
AT4G00910.1 Thale cress plasma membrane 25.0 28.25
AT3G11680.2 Thale cress plasma membrane 25.18 28.16
AT5G46610.1 Thale cress cytosol, peroxisome, plasma membrane 27.74 27.99
AT4G17970.1 Thale cress cytosol 27.92 27.32
AT5G46600.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 26.28 26.72
AT1G08440.1 Thale cress cytosol, golgi, plasma membrane 22.81 24.95
AT2G27240.1 Thale cress golgi 22.81 24.7
AT1G08430.1 Thale cress golgi 21.9 24.34
AT4G17585.1 Thale cress cytosol 6.02 21.71
Os02t0673000-01 Rice golgi, mitochondrion, plasma membrane 8.76 21.24
Protein Annotations
MapMan:24.3.11EntrezGene:839134UniProt:A0A178W9P3ProteinID:AAG50799.1ProteinID:AEE30631.1InterPro:ALMT
ArrayExpress:AT1G25480EnsemblPlantsGene:AT1G25480RefSeq:AT1G25480TAIR:AT1G25480RefSeq:AT1G25480-TAIR-GEnsemblPlants:AT1G25480.1
TAIR:AT1G25480.1ncoils:CoilGO:GO:0003674GO:GO:0005215GO:GO:0005253GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0006810GO:GO:0006811
GO:GO:0008150GO:GO:0009705GO:GO:0009987GO:GO:0015140GO:GO:0015698GO:GO:0015743
GO:GO:0016020GO:GO:0016021GO:GO:0071423GO:GO:0090332RefSeq:NP_173919.1ProteinID:OAP15137.1
PFAM:PF11744PO:PO:0000293PANTHER:PTHR31086PANTHER:PTHR31086:SF20UniProt:Q9C6L8TMHMM:TMhelix
UniParc:UPI000009EBCBSEG:seg::::
Description
ALMT4Aluminum-activated malate transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6L8]
Coordinates
chr1:+:8948232..8951031
Molecular Weight (calculated)
61722.9 Da
IEP (calculated)
6.672
GRAVY (calculated)
-0.073
Length
548 amino acids
Sequence
(BLAST)
001: MADQTREAFL SRKACSDFGF NDSNIIDDRR SKFRCFRFCS DGITASWKAL YDIGAKLYEM GRSDRRKVYF SVKMGMALAL CSFVIYLKEP LRDASKYAVW
101: AILTVVVVFE YSIGATLVKG FNRAIGTLSA GGLALGIARL SVSAGEFEEL IIIISIFIAG FSASYLKLYP AMKSYEYAFR VFLLTYCIVL VSGNNSRDFF
201: STAYYRFLLI LVGAGICLGV NIFILPIWAG EDLHKLVVKN FKSVANSLEG CVNGYLQCVE YERIPSKILT YQASDDPLYS GYRSVVQSTS QEDSLLDFAV
301: WEPPHGPYKT FHHPWANYVK LSGAVRHCAF MVMAMHGCIL SEIQAAPEKR QAFRQELQRV GNEGAKVLRL FGEKVEKMEK LSPGNVLKDV QRAAEELQMK
401: IDSNSFLLVN SESWAAMKEK AEAEEAQQNY HEAKDDESKV IQSLSQIWDN NNNPHHQNQH AGNDSQLWIS TESMMLRNRE NWPSVSFIGG SMINEIESKV
501: YESASSLSLA TFASLLIEFV ARLQNIVNAY EELSTKADFK EQVSETRI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.