CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

mitochondrion: 28499913

msms PMID: 28499913 doi

S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata

Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39212	Soybean	mitochondrion	94.8	94.48
KRH60327	Soybean	cytosol, golgi, plasma membrane	71.31	73.78
KRH41621	Soybean	golgi, peroxisome, plasma membrane	68.79	71.18
KRH60330	Soybean	plasma membrane	43.46	66.93
VIT_17s0000g03850.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	65.94	66.84
GSMUA_Achr7P18770_001	Banana	golgi, peroxisome, plasma membrane	55.7	62.88
AT3G18440.1	Thale cress	plasma membrane	60.07	59.87
GSMUA_Achr10P...	Banana	plasma membrane	53.36	59.22
Solyc03g119640.2.1	Tomato	cytosol, golgi, mitochondrion, plasma membrane	60.23	58.95
PGSC0003DMT400014614	Potato	cytosol, plasma membrane, vacuole	58.89	58.11
KRG90790	Soybean	cytosol	53.69	57.87
KRH75405	Soybean	mitochondrion	53.52	57.58
CDY26161	Canola	mitochondrion	54.03	57.5
KRH45244	Soybean	mitochondrion, peroxisome, plasma membrane, plastid	53.36	56.99
CDY19211	Canola	mitochondrion	53.86	56.91
AT1G18420.1	Thale cress	mitochondrion	55.03	56.45
KRH35972	Soybean	cytosol, peroxisome, plasma membrane	53.02	56.33
Bra025906.1-P	Field mustard	mitochondrion	54.7	56.11
KRH70564	Soybean	mitochondrion	51.85	56.08
AT1G25480.1	Thale cress	cytosol, peroxisome, plasma membrane	51.51	56.02
OQU85465	Sorghum	golgi	48.66	55.98
AT1G68600.1	Thale cress	cytosol, golgi, plasma membrane	50.17	55.68
CDY24338	Canola	plasma membrane	33.72	55.68
CDY42102	Canola	peroxisome	50.84	55.49
CDY36105	Canola	cytosol, peroxisome, plasma membrane	53.02	55.44
Bra024742.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	52.52	55.2
CDX84992	Canola	peroxisome	50.5	55.13
Bra010995.1-P	Field mustard	cytosol, peroxisome, plasma membrane	53.02	54.67
Os06t0268800-01	Rice	cytosol, plasma membrane, plastid	35.57	54.64
CDY24400	Canola	cytosol, peroxisome, plasma membrane	52.52	54.06
HORVU7Hr1G042480.1	Barley	endoplasmic reticulum, plasma membrane, plastid	51.01	53.62
TraesCS7D01G211100.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	52.52	53.23
TraesCS7B01G116000.1	Wheat	endoplasmic reticulum, plastid, vacuole	52.35	53.15
CDY18521	Canola	plasma membrane	59.06	52.93
Bra002062.1-P	Field mustard	cytosol, peroxisome, plasma membrane	49.5	52.77
TraesCS7A01G208700.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	51.85	52.55
AT2G17470.2	Thale cress	cytosol	48.83	51.96
Zm00001d017928_P001	Maize	plasma membrane	50.67	50.76
TraesCS7A01G220200.1	Wheat	cytosol, peroxisome, vacuole	49.16	50.43
Os02t0730600-00	Rice	endoplasmic reticulum, peroxisome, plasma membrane, plastid	49.33	50.34
TraesCS7D01G221900.2	Wheat	cytosol, peroxisome, plasma membrane	48.99	50.26
CDX81872	Canola	peroxisome, plastid, vacuole	24.33	50.17
Zm00001d010130_P001	Maize	cytosol	16.28	50.0
TraesCS7B01G127200.2	Wheat	cytosol, peroxisome, vacuole	48.49	49.66
HORVU7Hr1G045290.1	Barley	extracellular, peroxisome, vacuole	48.49	49.66
Zm00001d045696_P001	Maize	mitochondrion, plastid	50.84	49.27
EER89585	Sorghum	plastid	50.34	48.7
HORVU6Hr1G072900.3	Barley	peroxisome	47.82	46.34
TraesCS6B01G321600.1	Wheat	plasma membrane	47.48	42.81
Zm00001d044350_P001	Maize	mitochondrion	13.42	38.1
KRH77600	Soybean	peroxisome	28.86	33.46
KRH32007	Soybean	plasma membrane	17.45	33.02
KRH28280	Soybean	peroxisome	29.7	32.96
KRH77215	Soybean	cytosol, peroxisome, plasma membrane	29.36	32.59
KRG90599	Soybean	plasma membrane	26.85	32.26
KRG95509	Soybean	plasma membrane	20.97	31.41
KRG90598	Soybean	endoplasmic reticulum, peroxisome, plasma membrane	27.18	31.21
KRH36161	Soybean	endoplasmic reticulum, peroxisome, plasma membrane, plastid	26.85	31.07
KRG90597	Soybean	golgi, mitochondrion	26.68	31.05
KRH58213	Soybean	cytosol	27.35	31.05
KRH26686	Soybean	golgi, peroxisome, plasma membrane	22.48	30.8
KRH04324	Soybean	cytosol	27.85	30.8
KRG92525	Soybean	plasma membrane	25.34	30.51
KRH68006	Soybean	golgi, peroxisome, plasma membrane	24.66	30.25
KRH26685	Soybean	plasma membrane	22.65	30.2
KRH71433	Soybean	nucleus, plasma membrane, vacuole	22.82	30.02
KRH67188	Soybean	plasma membrane	22.82	29.96
KRH34268	Soybean	plasma membrane	24.83	29.84
KRG96263	Soybean	nucleus	23.99	29.61
KRH25315	Soybean	plasma membrane	22.82	28.27
KRH30357	Soybean	plasma membrane	22.82	28.16
CDX95521	Canola	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	59.4	27.34
Bra037581.1-P	Field mustard	golgi, mitochondrion, nucleus, plasma membrane	59.56	26.83
Os02t0673000-01	Rice	golgi, mitochondrion, plasma membrane	9.06	23.89
KRH04321	Soybean	golgi	27.01	22.02
KRH36162	Soybean	endoplasmic reticulum, plasma membrane, plastid	27.35	20.05
CDY18522	Canola	cytosol, golgi, nucleus, plastid	0.34	0.29

Protein Annotations

EMBL:ACUP02004239	EnsemblPlants:KRH48465	EnsemblPlantsGene:GLYMA_07G090300	EntrezGene:100784461	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015743	GO:GO:0016020	GO:GO:0016021	InterPro:ALMT	PANTHER:PTHR31086
PANTHER:PTHR31086:SF20	PFAM:PF11744	ProteinID:KRH48465	ProteinID:KRH48465.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0001B639E7	UniProt:A0A0R4J3N8	MapMan:24.3.11	:	:	:

Description

hypothetical protein

Coordinates

chr7:-:8448701..8454515

Molecular Weight (calculated)

66274.1 Da

IEP (calculated)

7.471

GRAVY (calculated)

-0.083

Length

596 amino acids

Sequence
(BLAST)

001: MMGSTGRVAK LGSFRHSFAE KKERLLSMKG GGYSQIGIGI ALPESDEEDQ SPTRRSCCSY RAVSDGIVGA WKTAKHVVAR AWEMGRSDPR KIIFSAKMGL
101: ALILLSLLIF LKQPFEDISK HSVWAILTVV VVFEFSIGAT LSKGLNRGLG TLLAGGLALG MGLLSKLAGK WEETIIVISI FTAGFCVTYA KQYPTMKAYE
201: YGFRVFLITY CFIIVSGYRS GEFVETAVDR FLLIALGAAV ALGVNVCIYP IWAGEDLHKL VAKNFVGVAA SLEGVVNNYL NCIEYERVPS KILTYQASED
301: VVYKGYRSAV ESTSTEDSLM GFAVWEPPHG RYKMLRYPWQ NYVKVSGALR HCAFMVMAMH GCILSEIQAP PEKRQVFSRE VQKLGSEAAK ILRELGNKVK
401: KMEKLGEEDI LYEVHEAAEE LQQKIDKKSF LLVNSESWEI GNRPRGEGDP QDLLNMNEER HFLEYKSLSE AVLDLRTAKV PRSWGELATP DNKPAAPIGV
501: GDENLFKKQI SWPAHISFKA DAGTREEESK TYESASSLSL ATFTSLLIEF VARLQNLVDS FEELGEKAKF KDPLEQAPPT SGGFWNRLCN CLTFKD

Best Arabidopsis Sequence Match ( AT3G18440.1 )
(BLAST)

001: MAAKQGSFRH GILEKRERLL SNNGFSDFRF TDIESNDLLE NENCGRRTRL CCCCSCGNLS EKISGVYDDA KDVARKAWEM GVSDPRKIVF SAKIGLALTI
101: VALLIFYQEP NPDLSRYSVW AILTVVVVFE FTIGATLSKG FNRALGTLSA GGLALGMAEL STLFGDWEEI FCTLSIFCIG FLATFMKLYP SMKAYEYGFR
201: VFLLTYCYIL ISGFRTGQFI EVAISRFLLI ALGAGVSLGV NMFIYPIWAG EDLHNLVVKN FMNVATSLEG CVNGYLRCLE YERIPSKILT YQASEDPVYK
301: GYRSAVESTS QEESLMSFAI WEPPHGPYKS FNYPWKNYVK LSGALKHCAF TVMALHGCIL SEIQAPEERR QVFRQELQRV GVEGAKLLRE LGEKVKKMEK
401: LGPVDLLFEV HLAAEELQHK IDKKSYLLVN SECWEIGNRA TKESEPQELL SLEDSDPPEN HAPPIYAFKS LSEAVLEIPP SWGEKNHREA LNHRPTFSKQ
501: VSWPARLVLP PHLETTNGAS PLVETTKTYE SASALSLATF ASLLIEFVAR LQNVVDAFKE LSQKANFKEP EIVTTGTDVE FSGERVGLGQ KIRRCFGM

Arabidopsis Description

ALMT9Aluminum-activated malate transporter 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS46]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.