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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • plastid 1
  • peroxisome 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:mitochondrion, peroxisome, plastid
iPSORT:plastid
MultiLoc:peroxisome
TargetP:mitochondrion
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G321600.1 Wheat plasma membrane 84.23 78.37
OQU85465 Sorghum golgi 62.28 73.94
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 64.39 67.81
Zm00001d017928_P001 Maize plasma membrane 64.88 67.06
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 58.54 63.49
HORVU7Hr1G045290.1 Barley extracellular, peroxisome, vacuole 55.28 58.42
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 49.92 58.14
GSMUA_Achr10P... Banana plasma membrane 48.62 55.68
VIT_18s0122g00020.t01 Wine grape endoplasmic reticulum, extracellular 18.37 53.3
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 32.68 52.07
KRH60330 Soybean plasma membrane 31.38 49.87
VIT_17s0000g03850.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 47.64 49.83
CDY24338 Canola plasma membrane 29.11 49.58
KRH60327 Soybean cytosol, golgi, plasma membrane 45.85 48.96
KRG90790 Soybean cytosol 43.9 48.82
AT1G68600.1 Thale cress cytosol, golgi, plasma membrane 42.28 48.42
KRH75405 Soybean mitochondrion 43.58 48.38
CDY42102 Canola peroxisome 42.93 48.35
KRH39212 Soybean mitochondrion 46.99 48.33
KRH70564 Soybean mitochondrion 43.25 48.28
CDY19211 Canola mitochondrion 44.23 48.23
CDY26161 Canola mitochondrion 43.9 48.21
KRH45244 Soybean mitochondrion, peroxisome, plasma membrane, plastid 43.74 48.21
KRH35972 Soybean cytosol, peroxisome, plasma membrane 43.74 47.95
KRH48465 Soybean mitochondrion 46.34 47.82
Solyc03g096820.2.1 Tomato golgi, peroxisome, plasma membrane, plastid 44.39 47.81
AT1G25480.1 Thale cress cytosol, peroxisome, plasma membrane 42.6 47.81
CDX84992 Canola peroxisome 42.44 47.8
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 44.23 47.64
CDY36105 Canola cytosol, peroxisome, plasma membrane 44.06 47.54
PGSC0003DMT400069527 Potato plasma membrane 43.41 47.51
AT2G17470.2 Thale cress cytosol 43.25 47.5
Bra025906.1-P Field mustard mitochondrion 44.55 47.16
AT3G18440.1 Thale cress plasma membrane 45.85 47.16
Bra010995.1-P Field mustard cytosol, peroxisome, plasma membrane 44.23 47.06
Bra002062.1-P Field mustard cytosol, peroxisome, plasma membrane 42.76 47.05
KRH41621 Soybean golgi, peroxisome, plasma membrane 43.9 46.88
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 46.02 46.85
Bra024742.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 43.09 46.74
CDY24400 Canola cytosol, peroxisome, plasma membrane 43.9 46.63
AT1G18420.1 Thale cress mitochondrion 43.74 46.3
Solyc03g119640.2.1 Tomato cytosol, golgi, mitochondrion, plasma membrane 45.69 46.14
Solyc05g009590.2.1 Tomato plasma membrane 36.75 43.13
CDX81872 Canola peroxisome, plastid, vacuole 20.16 42.91
PGSC0003DMT400033766 Potato cytosol 36.91 42.27
Solyc05g009580.2.1 Tomato cytosol 36.91 42.04
CDY18521 Canola plasma membrane 44.88 41.5
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 9.76 36.59
HORVU1Hr1G049820.21 Barley endoplasmic reticulum, peroxisome 25.2 28.39
HORVU2Hr1G073840.3 Barley peroxisome, plasma membrane 19.84 25.68
VIT_01s0011g03290.t01 Wine grape plasma membrane 46.34 25.24
HORVU2Hr1G095430.2 Barley plasma membrane 4.88 24.59
HORVU7Hr1G081320.3 Barley peroxisome 25.04 23.58
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 44.55 21.16
Bra037581.1-P Field mustard golgi, mitochondrion, nucleus, plasma membrane 44.72 20.79
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:HORVU6Hr1G072900.3EnsemblPlantsGene:HORVU6Hr1G072900GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015743
GO:GO:0016020GO:GO:0016021InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF23PFAM:PF11744
SEG:segTMHMM:TMhelixUniParc:UPI000B46FD19UniProt:A0A287UN38MapMan:24.3.11:
Description
No Description!
Coordinates
chrchr6H:+:506139008..506144155
Molecular Weight (calculated)
66214.5 Da
IEP (calculated)
7.154
GRAVY (calculated)
0.019
Length
615 amino acids
Sequence
(BLAST)
001: RTRAPLSQGG SSRPGRIADD TMASLPPLLP EQRTLRAALD QRGGLGEPLL SCHSWGHGPN AYEAPGDGPL RRAAAAVRAA GWELWTFSRK DPRKPVYAAK
101: VATALALITL LVFLREPSDI VSHSVWAILT VVVVFEFSIG ATLSKGLNRG LGTLTAGGLA LAVAESARHM GDLDIVFLII ITFAVGFGTT LIKVHPKMKP
201: YEYGLRVFLL TFCYVTVAGY NTGEFVGGTA VSRFLLIVIG AAVSLAVNIG IYPIWAGEDL HHLVAKNFGG VAKSLEGCVN GYLTCMEYER IPSKILTYQA
301: SDDPVYSGYR AVVEAQTQEE TLLGFAIWEP PHGPYKMMKY PWESYTKVGG ALRHCSFAVM ALHGCILSEI QSTPENRKVF SAELHRVGEE AAKVLRELGH
401: RVKTMTRLSS PNILAEVLHA AEELQTKIDQ RSYLLVNTER WGEDTAASTT TPAGAGASSE NEAPEHAVVI NVPTLHKLES NATPARAAGV GLPPLHKSES
501: NTTLARAASS NTTLARFDSV PMSLADGLAL KSQGSWHHRM PLFEAAEARA YESASALSLG TFASLLIEFV ARLGNLVNAV EELSDKAGFK DPVEEPSAAS
601: RKEEEAGVLG RMTRF
Best Arabidopsis Sequence Match ( AT3G18440.1 )
(BLAST)
001: MAAKQGSFRH GILEKRERLL SNNGFSDFRF TDIESNDLLE NENCGRRTRL CCCCSCGNLS EKISGVYDDA KDVARKAWEM GVSDPRKIVF SAKIGLALTI
101: VALLIFYQEP NPDLSRYSVW AILTVVVVFE FTIGATLSKG FNRALGTLSA GGLALGMAEL STLFGDWEEI FCTLSIFCIG FLATFMKLYP SMKAYEYGFR
201: VFLLTYCYIL ISGFRTGQFI EVAISRFLLI ALGAGVSLGV NMFIYPIWAG EDLHNLVVKN FMNVATSLEG CVNGYLRCLE YERIPSKILT YQASEDPVYK
301: GYRSAVESTS QEESLMSFAI WEPPHGPYKS FNYPWKNYVK LSGALKHCAF TVMALHGCIL SEIQAPEERR QVFRQELQRV GVEGAKLLRE LGEKVKKMEK
401: LGPVDLLFEV HLAAEELQHK IDKKSYLLVN SECWEIGNRA TKESEPQELL SLEDSDPPEN HAPPIYAFKS LSEAVLEIPP SWGEKNHREA LNHRPTFSKQ
501: VSWPARLVLP PHLETTNGAS PLVETTKTYE SASALSLATF ASLLIEFVAR LQNVVDAFKE LSQKANFKEP EIVTTGTDVE FSGERVGLGQ KIRRCFGM
Arabidopsis Description
ALMT9Aluminum-activated malate transporter 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS46]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.