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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, peroxisome

Predictor Summary:
  • nucleus 2
  • peroxisome 2
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, peroxisome
Any Predictor:cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:peroxisome
Plant-mPloc:extracellular, peroxisome, plastid
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY42102 Canola peroxisome 96.12 99.82
AT1G25480.1 Thale cress cytosol, peroxisome, plasma membrane 87.13 90.15
Bra010995.1-P Field mustard cytosol, peroxisome, plasma membrane 89.95 88.24
Bra002062.1-P Field mustard cytosol, peroxisome, plasma membrane 70.02 71.02
VIT_18s0122g00020.t01 Wine grape endoplasmic reticulum, extracellular 23.46 62.74
KRG90790 Soybean cytosol 59.96 61.48
KRH75405 Soybean mitochondrion 59.44 60.83
KRH70564 Soybean mitochondrion 58.38 60.07
KRH45244 Soybean mitochondrion, peroxisome, plasma membrane, plastid 59.08 60.04
KRH35972 Soybean cytosol, peroxisome, plasma membrane 58.91 59.54
Solyc06g072920.1.1 Tomato endoplasmic reticulum, golgi 39.86 58.55
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 53.97 57.95
GSMUA_Achr10P... Banana plasma membrane 53.44 56.42
PGSC0003DMT400069527 Potato plasma membrane 54.5 54.98
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 54.5 54.12
KRH60327 Soybean cytosol, golgi, plasma membrane 53.97 53.12
VIT_17s0000g03850.t01 Wine grape cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 54.85 52.89
KRH39212 Soybean mitochondrion 55.73 52.84
OQU85465 Sorghum golgi 48.15 52.7
KRH48465 Soybean mitochondrion 55.2 52.52
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 51.32 51.32
KRH60330 Soybean plasma membrane 34.57 50.65
KRH41621 Soybean golgi, peroxisome, plasma membrane 51.15 50.35
TraesCS7A01G208700.1 Wheat endoplasmic reticulum, plasma membrane, plastid 52.2 50.34
TraesCS7D01G211100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 52.2 50.34
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 34.39 50.26
TraesCS7B01G116000.1 Wheat endoplasmic reticulum, plastid, vacuole 51.85 50.09
Solyc06g072910.2.1 Tomato peroxisome, plasma membrane, vacuole 14.11 48.78
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 51.85 48.68
Zm00001d010130_P001 Maize cytosol 16.4 47.94
Bra025906.1-P Field mustard mitochondrion 49.03 47.85
TraesCS7D01G221900.2 Wheat cytosol, peroxisome, plasma membrane 48.68 47.5
TraesCS7A01G220200.1 Wheat cytosol, peroxisome, vacuole 48.32 47.16
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 48.5 47.09
TraesCS7B01G127200.2 Wheat cytosol, peroxisome, vacuole 48.15 46.91
HORVU7Hr1G045290.1 Barley extracellular, peroxisome, vacuole 48.15 46.91
PGSC0003DMT400033766 Potato cytosol 44.27 46.74
Zm00001d017928_P001 Maize plasma membrane 48.85 46.55
Zm00001d045696_P001 Maize mitochondrion, plastid 50.09 46.18
EER89585 Sorghum plastid 49.56 45.62
HORVU6Hr1G072900.3 Barley peroxisome 46.74 43.09
TraesCS6B01G321600.1 Wheat plasma membrane 46.03 39.49
Zm00001d044350_P001 Maize mitochondrion 13.05 35.24
VIT_01s0011g03290.t01 Wine grape plasma membrane 64.73 32.51
Bra037402.1-P Field mustard cytosol, peroxisome, plasma membrane 24.16 29.09
Bra012627.1-P Field mustard cytosol 26.81 28.41
Bra022048.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 26.45 27.78
Bra034819.1-P Field mustard cytosol, golgi, plasma membrane 23.99 27.76
Bra008542.1-P Field mustard plasma membrane 21.87 27.37
Bra038672.1-P Field mustard plasma membrane 23.63 27.35
Bra025011.1-P Field mustard plasma membrane 27.34 26.36
Bra000933.1-P Field mustard plasma membrane 24.34 26.14
Bra034339.1-P Field mustard golgi 22.22 25.61
Bra030725.1-P Field mustard plasma membrane 22.05 25.41
Bra030726.1-P Field mustard cytosol, golgi, plasma membrane 22.05 25.1
Bra018625.1-P Field mustard cytosol, golgi, plasma membrane 22.22 24.8
Bra037581.1-P Field mustard golgi, mitochondrion, nucleus, plasma membrane 52.91 22.68
Os02t0673000-01 Rice golgi, mitochondrion, plasma membrane 8.29 20.8
Protein Annotations
EnsemblPlants:Bra024742.1EnsemblPlants:Bra024742.1-PEnsemblPlantsGene:Bra024742GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTncoils:CoilPANTHER:PTHR31086
PANTHER:PTHR31086:SF20PFAM:PF11744SEG:segTMHMM:TMhelixUniParc:UPI0002542730UniProt:M4E7I7
MapMan:24.3.11:::::
Description
AT1G25480 (E=1e-271) | unknown protein
Coordinates
chrA09:+:23118703..23121874
Molecular Weight (calculated)
63906.7 Da
IEP (calculated)
7.291
GRAVY (calculated)
-0.035
Length
567 amino acids
Sequence
(BLAST)
001: MFGDQTRDAL LSRKGCSDFG FNDSGIISDD RRSKWRCFRF FSDGIVASWK ALYDFAASLY EMGRSDRRKV YFAVKMGVAL ALCSFVIYLK EPLHDASKYA
101: VWAILTVVVV FEYSIGATLV KGFNRAIGTL SAGGLALGIA RLSVLAGRFE EEIIIVSIFL AGLCASYLKL YPAMKSYEYA FRVFLLTFCI VLVSGNNSRD
201: FFSTAYFRFL LICVGACICL GVNIFILPIW SGEDLHKLVV KNFKSVANSL EGCVNGYLQC VEYERIPSKI LTYQASDDPL YSGYRSVVQS TSQEDSLLDF
301: AVWEPPHGPY RTFHHPWANY VKLSGAVRHC AFMVMAMHGC ILSEIQAAPE KRQAFRHELQ RVGNEGAKVL RLFAEKVEKM EKLSLGNILK DVQRAAEELQ
401: MKIDKNSFLL VNSESWAAMK EKADAEEAQE NYHESKDDET KVFQTLSQIW DTNNHHQNPH NGNDSHLWIS TESMMLRNRE QWPSVSFIGG NMINEIESKV
501: YESASSLSLA TFASLLIEFV ARLQNVVNAF EELSTKAGFK EPVSETPKKI DKAGFWTRLS SCFSSRA
Best Arabidopsis Sequence Match ( AT1G25480.1 )
(BLAST)
001: MADQTREAFL SRKACSDFGF NDSNIIDDRR SKFRCFRFCS DGITASWKAL YDIGAKLYEM GRSDRRKVYF SVKMGMALAL CSFVIYLKEP LRDASKYAVW
101: AILTVVVVFE YSIGATLVKG FNRAIGTLSA GGLALGIARL SVSAGEFEEL IIIISIFIAG FSASYLKLYP AMKSYEYAFR VFLLTYCIVL VSGNNSRDFF
201: STAYYRFLLI LVGAGICLGV NIFILPIWAG EDLHKLVVKN FKSVANSLEG CVNGYLQCVE YERIPSKILT YQASDDPLYS GYRSVVQSTS QEDSLLDFAV
301: WEPPHGPYKT FHHPWANYVK LSGAVRHCAF MVMAMHGCIL SEIQAAPEKR QAFRQELQRV GNEGAKVLRL FGEKVEKMEK LSPGNVLKDV QRAAEELQMK
401: IDSNSFLLVN SESWAAMKEK AEAEEAQQNY HEAKDDESKV IQSLSQIWDN NNNPHHQNQH AGNDSQLWIS TESMMLRNRE NWPSVSFIGG SMINEIESKV
501: YESASSLSLA TFASLLIEFV ARLQNIVNAY EELSTKADFK EQVSETRI
Arabidopsis Description
ALMT4Aluminum-activated malate transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6L8]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.