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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 2
  • golgi 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:golgi
Plant-mPloc:nucleus
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY30563 Canola plasma membrane 97.36 93.74
CDX77103 Canola golgi 96.95 93.35
AT2G27240.1 Thale cress golgi 80.69 78.46
Bra030726.1-P Field mustard cytosol, golgi, plasma membrane 66.87 66.06
Bra018625.1-P Field mustard cytosol, golgi, plasma membrane 67.68 65.55
Bra030725.1-P Field mustard plasma membrane 61.18 61.18
Solyc11g068970.1.1 Tomato cytosol, peroxisome, plasma membrane 48.58 51.18
PGSC0003DMT400050498 Potato cytosol, peroxisome, plasma membrane 44.31 49.89
VIT_06s0009g00450.t01 Wine grape plasma membrane 48.37 49.69
KRH30357 Soybean plasma membrane 48.58 49.48
KRH25315 Soybean plasma membrane 48.17 49.27
GSMUA_Achr8P30390_001 Banana cytosol, endoplasmic reticulum, plasma membrane 37.6 44.15
GSMUA_Achr6P35650_001 Banana plastid 39.02 42.38
TraesCS2B01G314100.1 Wheat plasma membrane 38.62 41.94
TraesCS2A01G297900.1 Wheat endoplasmic reticulum, golgi, plasma membrane 34.15 40.38
Bra038672.1-P Field mustard plasma membrane 39.84 40.0
KXG26278 Sorghum cytosol, peroxisome, plasma membrane 36.18 39.91
Os04t0417000-01 Rice cytosol, plastid, vacuole 36.79 39.78
Zm00001d025373_P001 Maize cytosol, peroxisome, plasma membrane 35.37 39.64
Bra034819.1-P Field mustard cytosol, golgi, plasma membrane 39.23 39.39
TraesCS2D01G295900.1 Wheat plasma membrane 38.62 39.26
HORVU2Hr1G073840.3 Barley peroxisome, plasma membrane 37.8 39.16
Zm00001d003749_P001 Maize plasma membrane 36.79 39.01
OQU81544 Sorghum peroxisome 34.76 38.0
OQU81543 Sorghum cytosol, peroxisome, plasma membrane 32.11 37.0
TraesCS4D01G283600.1 Wheat plasma membrane 34.35 36.27
Bra037402.1-P Field mustard cytosol, peroxisome, plasma membrane 31.71 33.12
Bra008542.1-P Field mustard plasma membrane 29.27 31.79
OQU75600 Sorghum cytosol 13.21 31.71
Bra000933.1-P Field mustard plasma membrane 32.72 30.49
Bra012627.1-P Field mustard cytosol 30.28 27.85
Bra022048.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 29.67 27.04
Bra025011.1-P Field mustard plasma membrane 30.89 25.85
Bra025906.1-P Field mustard mitochondrion 26.42 22.38
Bra010995.1-P Field mustard cytosol, peroxisome, plasma membrane 26.22 22.32
Bra024742.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 25.61 22.22
Bra002062.1-P Field mustard cytosol, peroxisome, plasma membrane 24.8 21.82
Bra037581.1-P Field mustard golgi, mitochondrion, nucleus, plasma membrane 26.22 9.75
Protein Annotations
EnsemblPlants:Bra034339.1EnsemblPlants:Bra034339.1-PEnsemblPlantsGene:Bra034339GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF22
PFAM:PF11744SEG:segTMHMM:TMhelixUniParc:UPI00025438A3UniProt:M4EZU6MapMan:24.3.11
Description
AT1G08440 (E=4e-160) | CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0005 (InterPro:IPR006214); BEST Arabidopsis thaliana protein match is: ALMT1 (ALUMINUM-ACTIVATED MALATE TRANSPORTER 1); malate transmembrane transporter (TAIR:AT1G08430.1); Has 377 Blast hits to 376 proteins in 91 species: Archae - 0; Bacteria - 139; Metazoa - 0; Fungi - 4; Plants - 211; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
Coordinates
chrA04:+:12004174..12007472
Molecular Weight (calculated)
55023.2 Da
IEP (calculated)
7.593
GRAVY (calculated)
-0.041
Length
492 amino acids
Sequence
(BLAST)
001: MEKVRDLVRE GKRVAKEDPR RVVHSFKVGL VLSLVSSFYY YQPLYDSFGV NAMWAVMTVV VVFEFSVGAT LGKGLNRVAA TLFAGALGIG AHHLASLSGS
101: TGEPILLAIF VFIQAALSTF VRFFPRVKAR YDYSLLIFIL TFALISVSGF REEQVLVLTH KRISTVIIGG LSCVLISIFV CPVWAGQDLH SLLASNVEKL
201: SFFLLEFGDK YCETVKDGDT KEVDKRKNDF DNYKSVLNSK SNEESLANFA KWEPGHGQFR FRHPWKQYLS IGGLIRQCAY RIDALNSYLN ADIQVSIDIR
301: KKLEEPFRRM SFESGKAMKE MSVSLTKMIK PSSSDLHVRN AQSACKSLTS LLHSGILKEV ESQELISLLT AISLLIDIIN LTENILESLH ELASAARFKD
401: KTESPIFAEK PNSKSIVCGW ATKGQDDHVV TIVNDDCCNG NTSEKGNRSN KVLIHEKHED CVHEKHEDDD AHVHSSCDSY GHTSLRVIVE CR
Best Arabidopsis Sequence Match ( AT2G27240.2 )
(BLAST)
001: MEKVREIVRE GRRVAKEDPR RVVHSFKVGL VLALVSSFYY YQPLYDSFGV NAMWAVMTVV VVFEFSVGAT LGKGLNRVAA TLFAGGLGIG AHHLASMSGP
101: TGEPILLAVF VFVQAALSTF VRFFPRVKAR YDYSLLIFIL TFALISVSGF REEQVVKLTH KRISTVIIGG LSCVIISIFV CPVWAGQDLH SLIASNFEKL
201: SFFLLDFGDK YCEVVENDGA KEVDKRKKDF DNYKSVLNSK SNEESLANFA KWEPGHGQFR FRHPWKQYLA VGELIRQCAY RIHALNSYLN ADNQVSVDIK
301: KKLGEPLRRM SLESGKAMKE MSISLKKMTK PSSSDLHVQN AKSACKSLTN LLNSGILKEV EPLELVSLLT AISLLIDIIN LTEKILESLH ELATAAKFKN
401: KIEHPLFSEK PKAKSFVSVR SIKCHDDHVV IIIEDDGNND DTSKNDNGSK EVSIHEKHED DDTHVDARCV SCGHTSVCVK
Arabidopsis Description
ALMT7Aluminum-activated malate transporter 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9XIN1]
SUBAcon: [golgi]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.