Factsheet for VIT_01s0011g03290.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_18s0122g00020.t01	Wine grape	endoplasmic reticulum, extracellular	14.61	77.83
KRG90790	Soybean	cytosol	33.22	67.81
KRH75405	Soybean	mitochondrion	32.77	66.79
KRH45244	Soybean	mitochondrion, peroxisome, plasma membrane, plastid	32.95	66.67
KRH70564	Soybean	mitochondrion	32.33	66.24
KRH35972	Soybean	cytosol, peroxisome, plasma membrane	32.6	65.6
CDY42102	Canola	peroxisome	31.71	65.57
CDX84992	Canola	peroxisome	31.71	65.57
AT1G25480.1	Thale cress	cytosol, peroxisome, plasma membrane	31.53	64.96
Bra024742.1-P	Field mustard	cytosol, endoplasmic reticulum, peroxisome	32.51	64.73
CDY24338	Canola	plasma membrane	20.64	64.54
CDY36105	Canola	cytosol, peroxisome, plasma membrane	32.51	64.39
GSMUA_Achr7P18770_001	Banana	golgi, peroxisome, plasma membrane	29.94	64.02
Bra010995.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.77	64.01
CDY24400	Canola	cytosol, peroxisome, plasma membrane	32.33	63.04
AT1G68600.1	Thale cress	cytosol, golgi, plasma membrane	29.94	62.94
VIT_17s0000g03850.t01	Wine grape	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	32.42	62.24
Bra002062.1-P	Field mustard	cytosol, peroxisome, plasma membrane	30.56	61.72
Solyc03g096820.2.1	Tomato	golgi, peroxisome, plasma membrane, plastid	31.09	61.47
PGSC0003DMT400001472	Potato	golgi, peroxisome, plasma membrane	31.0	61.3
PGSC0003DMT400069527	Potato	plasma membrane	30.38	61.03
AT2G17470.2	Thale cress	cytosol	30.2	60.89
GSMUA_Achr10P...	Banana	plasma membrane	28.88	60.71
AT3G18440.1	Thale cress	plasma membrane	30.12	56.86
OQU85465	Sorghum	golgi	25.95	56.56
Os06t0268800-01	Rice	cytosol, plasma membrane, plastid	18.87	54.9
CDY26161	Canola	mitochondrion	26.75	53.93
HORVU7Hr1G042480.1	Barley	endoplasmic reticulum, plasma membrane, plastid	26.93	53.62
CDY19211	Canola	mitochondrion	26.48	53.01
TraesCS7D01G211100.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	27.46	52.72
TraesCS7B01G116000.1	Wheat	endoplasmic reticulum, plastid, vacuole	27.37	52.64
TraesCS7A01G208700.1	Wheat	endoplasmic reticulum, plasma membrane, plastid	27.37	52.55
Os02t0730600-00	Rice	endoplasmic reticulum, peroxisome, plasma membrane, plastid	26.93	52.05
Bra025906.1-P	Field mustard	mitochondrion	26.75	51.98
Zm00001d010130_P001	Maize	cytosol	8.86	51.55
CDY18521	Canola	plasma membrane	30.2	51.28
AT1G18420.1	Thale cress	mitochondrion	26.22	50.95
TraesCS7D01G221900.2	Wheat	cytosol, peroxisome, plasma membrane	25.77	50.09
Zm00001d017928_P001	Maize	plasma membrane	26.31	49.92
TraesCS7A01G220200.1	Wheat	cytosol, peroxisome, vacuole	25.69	49.91
HORVU7Hr1G045290.1	Barley	extracellular, peroxisome, vacuole	25.69	49.83
TraesCS7B01G127200.2	Wheat	cytosol, peroxisome, vacuole	25.6	49.66
Zm00001d045696_P001	Maize	mitochondrion, plastid	26.84	49.27
EER89585	Sorghum	plastid	26.57	48.7
HORVU6Hr1G072900.3	Barley	peroxisome	25.24	46.34
CDX81872	Canola	peroxisome, plastid, vacuole	11.6	45.33
TraesCS6B01G321600.1	Wheat	plasma membrane	24.62	42.06
Zm00001d044350_P001	Maize	mitochondrion	7.79	41.9
VIT_02s0025g00700.t01	Wine grape	plasma membrane	16.47	37.27
VIT_07s0104g00100.t01	Wine grape	plastid	12.84	34.52
VIT_02s0025g02320.t01	Wine grape	cytosol	8.06	31.93
VIT_06s0009g00450.t01	Wine grape	plasma membrane	13.29	31.32
VIT_06s0080g00200.t01	Wine grape	plasma membrane	7.71	30.74
VIT_08s0105g00250.t01	Wine grape	cytosol, golgi, plasma membrane	13.11	30.52
VIT_15s0046g00130.t01	Wine grape	plasma membrane	13.2	30.16
VIT_06s0009g00480.t01	Wine grape	golgi, peroxisome, plasma membrane	12.84	29.18
VIT_06s0080g00170.t01	Wine grape	golgi, peroxisome, plasma membrane	12.93	28.85
CDX95521	Canola	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	29.41	25.64
Bra037581.1-P	Field mustard	golgi, mitochondrion, nucleus, plasma membrane	29.14	24.87
Os02t0673000-01	Rice	golgi, mitochondrion, plasma membrane	4.61	23.01
VIT_02s0012g01030.t01	Wine grape	plasma membrane	14.26	21.85
CDY18522	Canola	cytosol, golgi, nucleus, plastid	0.0	0.0

Protein Annotations

EntrezGene:100245583	wikigene:100245583	EntrezGene:100250710	wikigene:100250710	MapMan:24.3.11	InterPro:ALMT
ProteinID:CCB50929	ProteinID:CCB50929.1	UniProt:F6HFP4	EMBL:FN595752	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0006810
GO:GO:0008150	GO:GO:0009705	GO:GO:0015140	GO:GO:0015743	GO:GO:0016020	GO:GO:0016021
GO:GO:0071423	EntrezGene:LOC100245583	wikigene:LOC100245583	EntrezGene:LOC100250710	wikigene:LOC100250710	PFAM:PF11744
PANTHER:PTHR31086	PANTHER:PTHR31086:SF18	TMHMM:TMhelix	UniParc:UPI000210960A	ArrayExpress:VIT_01s0011g03290	EnsemblPlantsGene:VIT_01s0011g03290
EnsemblPlants:VIT_01s0011g03290.t01	unigene:Vvi.16454	RefSeq:XP_002278978	RefSeq:XP_002278978.1	RefSeq:XP_002278994	RefSeq:XP_002278994.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:2981226..2996541

Molecular Weight (calculated)

126995.0 Da

IEP (calculated)

6.709

GRAVY (calculated)

0.057

Length

1129 amino acids

Sequence
(BLAST)

0001: MVMFNNGFVD KSKERLPLIG SLDGVDGEEG SGRISFSWLL KKLKNFWNSV QDVSWKAWEM GRSDPRKIIF AMKMGLALSL VSLLIFWKEP ADVGQYSIWA
0101: ILTVIVMFEF SIGATFIKGF NRGLGTLCAG ILAFGFAELS VLAGPCEEVV IVISIFITGF FTSYLKLYPT MAPYEYGFRV FIMTYCILMM AGNRTREYNQ
0201: AVVIRLVLIA VGGGVCFIVN ICFYPIWAGE DLHSLVVKNF KGVATSLEGC VNGYLKCVQY ERVPQKIHTH QASDDPLSNG YRSVVESTSR EATLLGFAIW
0301: EPPHGRYRMF NYPWKNYVKL SGALRHCAFM VMALHGCILS EIQAPAERRL VFQSELQRVG TEGAKVLREL ANKVEKMEKL SPGDILKEVH EAAEQLQKKI
0401: DQRSYLLVNS ESWLIGRTRE VEDPVNLEDV KDNENVKLGS KSLSETVLEI RSFLAWPPSG DVFRKQSPWP SRPSFIADAV IREDEIRTYE SASALSLATF
0501: VSLLIEFVAR LQNVVDSFQE LSEKAEFRKP SVYFSHPLYQ GVFLRKMAAK VGSFRHSFVE RSKERLLSRK GYSEFGLNSS DGGDEPVKCL CFRWRTDAII
0601: NFWNGLQDTA SRLFEMARSD PRKVYFAAKM GLSLAIVSLF IFLKEPLKDV SQYSIWAILT VVVVFEFSVG ATLSKGFNRA LGTFSAGGLA LGIAELSMLT
0701: GALEEVIIII SIFIAGFCAS YCKLYPEMKP YEYGFRVFLL TFCIVLVSGS TSSKFLQTAL YRLLFIGVGA GICLVVNTCI CPIWAGEDLH KLVVKNFQGV
0801: ATSLEGCVNE YLQCVEYERI PSKILTYQAS DDPVYNGYRS VVQSTSQEDS LLDFAIWEPP HGHYRMFHYP WKSYVKVSGA LRHCAFMVMA MHGCILSEIQ
0901: APPEKRQVFS SELQRVGVEG AKVLRELGRK VEKMEKLGQQ DLLIEVHEAA EELQMKIDKN SFLLVNFASW EAGRLPKEYE DAENILQVKD TELKTPVITS
1001: LSETVLDLGS APRSWNAQTP NMSMDPPMPG WVSSESMFKK QVSWPSGLSF NADLVLNEQE SKTYESASSL SLATFTSLLI EFVARLQYLV DSFEELSELA
1101: KFKDPADLPA PKEVVGFWTR LRQCFGLNN

Best Arabidopsis Sequence Match ( AT1G25480.1 )
(BLAST)

001: MADQTREAFL SRKACSDFGF NDSNIIDDRR SKFRCFRFCS DGITASWKAL YDIGAKLYEM GRSDRRKVYF SVKMGMALAL CSFVIYLKEP LRDASKYAVW
101: AILTVVVVFE YSIGATLVKG FNRAIGTLSA GGLALGIARL SVSAGEFEEL IIIISIFIAG FSASYLKLYP AMKSYEYAFR VFLLTYCIVL VSGNNSRDFF
201: STAYYRFLLI LVGAGICLGV NIFILPIWAG EDLHKLVVKN FKSVANSLEG CVNGYLQCVE YERIPSKILT YQASDDPLYS GYRSVVQSTS QEDSLLDFAV
301: WEPPHGPYKT FHHPWANYVK LSGAVRHCAF MVMAMHGCIL SEIQAAPEKR QAFRQELQRV GNEGAKVLRL FGEKVEKMEK LSPGNVLKDV QRAAEELQMK
401: IDSNSFLLVN SESWAAMKEK AEAEEAQQNY HEAKDDESKV IQSLSQIWDN NNNPHHQNQH AGNDSQLWIS TESMMLRNRE NWPSVSFIGG SMINEIESKV
501: YESASSLSLA TFASLLIEFV ARLQNIVNAY EELSTKADFK EQVSETRI

Arabidopsis Description

ALMT4Aluminum-activated malate transporter 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9C6L8]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.