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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 3
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, plastid, secretory
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g009580.2.1 Tomato cytosol 97.58 97.04
GSMUA_Achr7P18770_001 Banana golgi, peroxisome, plasma membrane 48.23 49.05
AT1G68600.1 Thale cress cytosol, golgi, plasma membrane 47.3 47.3
CDY19211 Canola mitochondrion 48.98 46.63
AT1G25480.1 Thale cress cytosol, peroxisome, plasma membrane 47.49 46.53
CDY26161 Canola mitochondrion 48.42 46.43
PGSC0003DMT400069527 Potato plasma membrane 48.42 46.26
GSMUA_Achr10P... Banana plasma membrane 46.0 46.0
PGSC0003DMT400001472 Potato golgi, peroxisome, plasma membrane 48.79 45.88
Bra025906.1-P Field mustard mitochondrion 49.53 45.78
OQU85465 Sorghum golgi 43.95 45.56
PGSC0003DMT400014614 Potato cytosol, plasma membrane, vacuole 51.21 45.53
CDY36105 Canola cytosol, peroxisome, plasma membrane 48.23 45.44
CDY42102 Canola peroxisome 46.0 45.24
CDX84992 Canola peroxisome 45.62 44.87
AT3G18440.1 Thale cress plasma membrane 49.72 44.65
Bra010995.1-P Field mustard cytosol, peroxisome, plasma membrane 48.04 44.64
CDY24400 Canola cytosol, peroxisome, plasma membrane 47.86 44.39
Bra024742.1-P Field mustard cytosol, endoplasmic reticulum, peroxisome 46.74 44.27
AT1G18420.1 Thale cress mitochondrion 47.49 43.89
Zm00001d010130_P001 Maize cytosol 15.46 42.78
Bra002062.1-P Field mustard cytosol, peroxisome, plasma membrane 43.95 42.22
CDX81872 Canola peroxisome, plastid, vacuole 22.53 41.87
CDY24338 Canola plasma membrane 27.75 41.27
AT2G17470.2 Thale cress cytosol 42.64 40.89
HORVU7Hr1G042480.1 Barley endoplasmic reticulum, plasma membrane, plastid 42.64 40.39
Os06t0268800-01 Rice cytosol, plasma membrane, plastid 29.05 40.21
Zm00001d017928_P001 Maize plasma membrane 44.51 40.17
Os02t0730600-00 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 43.2 39.73
HORVU7Hr1G045290.1 Barley extracellular, peroxisome, vacuole 43.02 39.69
CDY18521 Canola plasma membrane 48.98 39.55
TraesCS7A01G208700.1 Wheat endoplasmic reticulum, plasma membrane, plastid 43.2 39.46
TraesCS7A01G220200.1 Wheat cytosol, peroxisome, vacuole 42.64 39.41
TraesCS7B01G116000.1 Wheat endoplasmic reticulum, plastid, vacuole 43.02 39.35
TraesCS7D01G211100.1 Wheat endoplasmic reticulum, plasma membrane, plastid 43.02 39.29
TraesCS7D01G221900.2 Wheat cytosol, peroxisome, plasma membrane 42.27 39.07
TraesCS7B01G127200.2 Wheat cytosol, peroxisome, vacuole 42.27 39.0
EER89585 Sorghum plastid 43.76 38.15
Zm00001d045696_P001 Maize mitochondrion, plastid 43.58 38.05
HORVU6Hr1G072900.3 Barley peroxisome 42.27 36.91
TraesCS6B01G321600.1 Wheat plasma membrane 42.46 34.49
Zm00001d044350_P001 Maize mitochondrion 13.22 33.81
PGSC0003DMT400052884 Potato cytosol 30.35 30.3
PGSC0003DMT400050498 Potato cytosol, peroxisome, plasma membrane 23.65 29.06
PGSC0003DMT400047767 Potato plasma membrane 22.91 28.81
PGSC0003DMT400075167 Potato golgi 14.53 27.56
PGSC0003DMT400000350 Potato endoplasmic reticulum, golgi 16.76 24.86
PGSC0003DMT400085620 Potato endoplasmic reticulum, plasma membrane, vacuole 14.34 24.84
PGSC0003DMT400072326 Potato golgi 18.62 24.57
PGSC0003DMT400089827 Potato endoplasmic reticulum, golgi 17.5 22.93
Os02t0673000-01 Rice golgi, mitochondrion, plasma membrane 9.31 22.12
PGSC0003DMT400086999 Potato cytosol, endoplasmic reticulum, plasma membrane 25.14 20.3
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 48.6 20.15
PGSC0003DMT400087967 Potato cytosol 24.58 19.85
Bra037581.1-P Field mustard golgi, mitochondrion, nucleus, plasma membrane 48.79 19.8
PGSC0003DMT400005384 Potato plasma membrane 21.6 17.39
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400033766EnsemblPlantsGene:PGSC0003DMG400012973GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0015743
GO:GO:0016020GO:GO:0016021InterPro:ALMTncoils:CoilPANTHER:PTHR31086PANTHER:PTHR31086:SF18
PFAM:PF11744PGSC:PGSC0003DMG400012973SEG:segTMHMM:TMhelixUniParc:UPI000294DA4FUniProt:M1AZM4
MapMan:24.3.11:::::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400012973]
Coordinates
chr5:-:2247566..2252022
Molecular Weight (calculated)
60697.5 Da
IEP (calculated)
7.886
GRAVY (calculated)
-0.046
Length
537 amino acids
Sequence
(BLAST)
001: MVTIKNFFKK ASHQDQHNQE KEKLLQHDDD EIKNGCCCFT PLYERFKSFF NNIQDFAKKA IEMGKNDPRK IIFSLKMGFA LSFVSLLIFW KKPTDVAQFA
101: IWAILTVLVM FEFTIGATFI KGFNRGLGTF CAGMLAFIFA QLALWAGERE KAVIVVSIFI VAFIGTYLKL YPTMAPYEYG YRVFILTYCI LIVAGNRTRE
201: YNVAIFTRLA LIAVGAGICL MINISVCPIW AGEDLHRLVV KNFMDLATSL EGCINGYLSG VDCDEATNDS DYNGYKSVIE STSREQTLLG FAIWEPPHGR
301: FKMHKNPWRD IVKLSSGLRH CAFMVMALHG CIQSEIQAPP EKRKVFRNEL KKVGTNAAKV LRELGTKLEK LEMLNGHENI LKEVHETAQN LQKKVDHKSY
401: LLVNSKSWEI GKSNIINNLD DSSSENSSEN IPLSSRSLSE TAIDIRSLQG NWPQSDQLVA KLTPFKKQNQ WPSRLSLVDG EIADTIEMET YLSASALSLA
501: TFASLLIEFV ARLQNVVDNF EELSQRAEFK ESISVKS
Best Arabidopsis Sequence Match ( AT3G18440.1 )
(BLAST)
001: MAAKQGSFRH GILEKRERLL SNNGFSDFRF TDIESNDLLE NENCGRRTRL CCCCSCGNLS EKISGVYDDA KDVARKAWEM GVSDPRKIVF SAKIGLALTI
101: VALLIFYQEP NPDLSRYSVW AILTVVVVFE FTIGATLSKG FNRALGTLSA GGLALGMAEL STLFGDWEEI FCTLSIFCIG FLATFMKLYP SMKAYEYGFR
201: VFLLTYCYIL ISGFRTGQFI EVAISRFLLI ALGAGVSLGV NMFIYPIWAG EDLHNLVVKN FMNVATSLEG CVNGYLRCLE YERIPSKILT YQASEDPVYK
301: GYRSAVESTS QEESLMSFAI WEPPHGPYKS FNYPWKNYVK LSGALKHCAF TVMALHGCIL SEIQAPEERR QVFRQELQRV GVEGAKLLRE LGEKVKKMEK
401: LGPVDLLFEV HLAAEELQHK IDKKSYLLVN SECWEIGNRA TKESEPQELL SLEDSDPPEN HAPPIYAFKS LSEAVLEIPP SWGEKNHREA LNHRPTFSKQ
501: VSWPARLVLP PHLETTNGAS PLVETTKTYE SASALSLATF ASLLIEFVAR LQNVVDAFKE LSQKANFKEP EIVTTGTDVE FSGERVGLGQ KIRRCFGM
Arabidopsis Description
ALMT9Aluminum-activated malate transporter 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS46]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.