Factsheet for PGSC0003DMT400085620

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	cytosol, peroxisome, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400089827	Potato	endoplasmic reticulum, golgi	91.29	69.02
Solyc01g007080.2.1	Tomato	peroxisome	88.39	57.68
PGSC0003DMT400072326	Potato	golgi	49.35	37.59
GSMUA_Achr8P30390_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	40.65	30.07
KRH68006	Soybean	golgi, peroxisome, plasma membrane	45.81	29.22
GSMUA_Achr6P35650_001	Banana	plastid	42.58	29.14
VIT_08s0105g00250.t01	Wine grape	cytosol, golgi, plasma membrane	45.48	29.07
CDY52054	Canola	cytosol, peroxisome, plasma membrane	40.0	28.57
KRG96263	Soybean	nucleus	44.52	28.57
TraesCS2A01G297900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	37.42	27.88
Os04t0417000-01	Rice	cytosol, plastid, vacuole	40.0	27.25
PGSC0003DMT400087967	Potato	cytosol	58.06	27.07
PGSC0003DMT400086999	Potato	cytosol, endoplasmic reticulum, plasma membrane	57.42	26.77
AT3G11680.2	Thale cress	plasma membrane	42.26	26.73
KXG26278	Sorghum	cytosol, peroxisome, plasma membrane	38.06	26.46
CDY08504	Canola	cytosol, golgi, plasma membrane	41.61	26.38
Bra038672.1-P	Field mustard	plasma membrane	41.61	26.33
Bra034819.1-P	Field mustard	cytosol, golgi, plasma membrane	41.61	26.33
CDY01048	Canola	cytosol, golgi, plasma membrane	41.29	26.23
Zm00001d025373_P001	Maize	cytosol, peroxisome, plasma membrane	37.1	26.2
TraesCS2B01G314100.1	Wheat	plasma membrane	37.74	25.83
Zm00001d003749_P001	Maize	plasma membrane	38.06	25.43
PGSC0003DMT400047767	Potato	plasma membrane	34.84	25.29
OQU81544	Sorghum	peroxisome	36.45	25.11
PGSC0003DMT400050498	Potato	cytosol, peroxisome, plasma membrane	34.84	24.71
HORVU2Hr1G073840.3	Barley	peroxisome, plasma membrane	37.74	24.63
OQU81543	Sorghum	cytosol, peroxisome, plasma membrane	33.55	24.36
TraesCS4D01G283600.1	Wheat	plasma membrane	36.45	24.25
TraesCS2D01G295900.1	Wheat	plasma membrane	37.74	24.17
PGSC0003DMT400000350	Potato	endoplasmic reticulum, golgi	26.77	22.93
PGSC0003DMT400075167	Potato	golgi	20.0	21.91
OQU75600	Sorghum	cytosol	13.87	20.98
PGSC0003DMT400052884	Potato	cytosol	30.97	17.84
PGSC0003DMT400033766	Potato	cytosol	24.84	14.34
PGSC0003DMT400001472	Potato	golgi, peroxisome, plasma membrane	26.13	14.19
PGSC0003DMT400069527	Potato	plasma membrane	24.52	13.52
PGSC0003DMT400005384	Potato	plasma membrane	28.39	13.19
PGSC0003DMT400014614	Potato	cytosol, plasma membrane, vacuole	25.16	12.91

Protein Annotations

EnsemblPlants:PGSC0003DMT400085620	EnsemblPlantsGene:PGSC0003DMG400035191	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015743
GO:GO:0016020	GO:GO:0016021	InterPro:ALMT	PANTHER:PTHR31086	PANTHER:PTHR31086:SF3	PFAM:PF11744
PGSC:PGSC0003DMG400035191	TMHMM:TMhelix	UniParc:UPI0002955B62	UniProt:M1D9W8	MapMan:24.3.11	:

Description

Aluminum-activated malate transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400035191]

Coordinates

chr1:-:3021889..3026085

Molecular Weight (calculated)

34175.9 Da

IEP (calculated)

8.760

GRAVY (calculated)

0.213

Length

310 amino acids

Sequence
(BLAST)

001: MAVLTVMVAF EYTAGATISK CLNIAFATAL GVSLGIGAKY LAEFCGKVGE PIILGFLVFI LGALGTFTRF YPHMQRRYDY GCMFSVATFS LVTVSGDRYL
101: ELVKHRISTI MVSVATVMVI SLVIRPVWAG KDLHNLIIAN LEKLASFLDG FESEYFQAIG EDSKDKEKGF LEAFKSVLGS KATEESLAPT KFHKRIEEAC
201: KGIITKSSNA LKCLTLSIKT RTQPPSSTGE PDPYNAKFAI DELRAVLLIT TKTISEEDTI DVITAMSVAS ILIDVTRCVD EISKAVGELS IKARFQKEEK
301: RRILLRQSRR

Best Arabidopsis Sequence Match ( AT1G08430.1 )
(BLAST)

001: MEKVREIVRE GIRVGNEDPR RIIHAFKVGL ALVLVSSFYY YQPFGPFTDY FGINAMWAVM TVVVVFEFSV GATLGKGLNR GVATLVAGGL GIGAHQLARL
101: SGATVEPILL VMLVFVQAAL STFVRFFPWV KTKFDYGILI FILTFALISL SGFRDEEIMD LAESRLSTVV IGGVSCILIS IFVCPVWAGQ DLHSLLASNF
201: DTLSHFLQDF GDEYFEAREK GDYKVVEKRK KNLERYKSVL DSKSDEEALA NYAEWEPPHG QFRFRHPWKQ YVAVGALLRQ CAYRIDALNS YINSDFQIPV
301: DIKKKLETPL RRMSSESGNS MKEMSISLKQ MIKSSSSDIH VSNSQAACKS LSTLLKSGIL NDVEPLQMIS LMTTVSMLID IVNLTEKISE SVHELASAAR
401: FKNKMRPTVL YEKSDSGSIG RAMPIDSHED HHVVTVLHDV DNDRSNNVDD SRGGSSQDSC HHVAIKIVDD NSNHEKHEDG EIHVHTLSNG HLQ

Arabidopsis Description

ALMT1Aluminum-activated malate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.