CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY01048	Canola	cytosol, golgi, plasma membrane	94.24	83.81
CDY08504	Canola	cytosol, golgi, plasma membrane	93.78	83.23
AT3G11680.2	Thale cress	plasma membrane	80.41	71.22
CDX97484	Canola	plasma membrane	17.28	55.15
KRG96263	Soybean	nucleus	56.22	50.52
VIT_08s0105g00250.t01	Wine grape	cytosol, golgi, plasma membrane	56.45	50.52
KRH68006	Soybean	golgi, peroxisome, plasma membrane	56.22	50.21
GSMUA_Achr8P30390_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	45.39	47.02
Solyc10g081890.1.1	Tomato	nucleus	51.15	46.44
GSMUA_Achr6P35650_001	Banana	plastid	48.16	46.14
PGSC0003DMT400072326	Potato	golgi	41.71	44.47
Os04t0417000-01	Rice	cytosol, plastid, vacuole	44.93	42.86
TraesCS2B01G314100.1	Wheat	plasma membrane	44.47	42.6
TraesCS2A01G297900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	40.78	42.55
KXG26278	Sorghum	cytosol, peroxisome, plasma membrane	43.32	42.15
Zm00001d025373_P001	Maize	cytosol, peroxisome, plasma membrane	42.4	41.91
OQU81544	Sorghum	peroxisome	43.09	41.56
Zm00001d003749_P001	Maize	plasma membrane	43.78	40.95
HORVU2Hr1G073840.3	Barley	peroxisome, plasma membrane	44.24	40.42
OQU81543	Sorghum	cytosol, peroxisome, plasma membrane	39.63	40.28
PGSC0003DMT400085620	Potato	endoplasmic reticulum, plasma membrane, vacuole	28.57	40.0
TraesCS2D01G295900.1	Wheat	plasma membrane	44.47	39.88
CDX97483	Canola	plasma membrane	43.09	39.53
CDY31146	Canola	cytosol, golgi, plasma membrane	45.16	39.36
CDX93562	Canola	cytosol, golgi, plasma membrane	45.62	38.98
CDX95060	Canola	cytosol, golgi, plasma membrane	45.62	38.98
TraesCS4D01G283600.1	Wheat	plasma membrane	41.47	38.63
CDY31147	Canola	plasma membrane	43.78	38.54
CDX97489	Canola	cytosol, golgi, plasma membrane	44.93	38.46
Solyc01g007080.2.1	Tomato	peroxisome	41.01	37.47
CDX97487	Canola	plasma membrane	32.95	37.05
CDY30563	Canola	plasma membrane	42.86	36.4
CDX77103	Canola	golgi	42.63	36.2
CDX74373	Canola	plasma membrane	39.4	35.85
CDX87698	Canola	plasma membrane	24.65	35.79
PGSC0003DMT400089827	Potato	endoplasmic reticulum, golgi	33.64	35.61
CDY07155	Canola	cytosol, peroxisome, plasma membrane	38.25	35.39
CDY01943	Canola	plasma membrane	38.71	35.22
CDY01945	Canola	plasma membrane	38.71	35.22
CDY51721	Canola	plasma membrane	38.02	35.03
CDX97239	Canola	plasma membrane	38.71	34.71
CDX91864	Canola	plasma membrane	38.71	33.27
CDY24338	Canola	plasma membrane	25.58	30.75
OQU75600	Sorghum	cytosol	14.06	29.76
Solyc01g007090.1.1	Tomato	cytosol	42.63	29.74
PGSC0003DMT400087967	Potato	cytosol	44.93	29.32
PGSC0003DMT400086999	Potato	cytosol, endoplasmic reticulum, plasma membrane	44.24	28.87
CDY01507	Canola	cytosol	34.79	28.87
CDX77675	Canola	cytosol, golgi, plasma membrane	35.94	28.78
CDX90432	Canola	cytosol	34.79	28.76
CDY63048	Canola	plasma membrane	36.18	28.49
CDX97485	Canola	endoplasmic reticulum, extracellular, plasma membrane	20.74	28.04
CDY59584	Canola	cytosol, endoplasmic reticulum, plasma membrane	33.41	26.85
CDY26161	Canola	mitochondrion	32.72	25.36
CDY19211	Canola	mitochondrion	32.26	24.82
CDY42102	Canola	peroxisome	31.11	24.73
CDX84992	Canola	peroxisome	30.88	24.54
CDY36105	Canola	cytosol, peroxisome, plasma membrane	31.57	24.04
CDY24400	Canola	cytosol, peroxisome, plasma membrane	32.03	24.01
CDX81872	Canola	peroxisome, plastid, vacuole	15.67	23.53
CDY18521	Canola	plasma membrane	30.18	19.7
CDX87700	Canola	cytosol	9.68	15.79
CDX95521	Canola	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	30.18	10.12
CDX97488	Canola	endoplasmic reticulum	0.0	0.0
CDY18522	Canola	cytosol, golgi, nucleus, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:CDY52054	EnsemblPlantsGene:GSBRNA2T00004770001	GO:A0A078IRK2	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015743	GO:GO:0016020	GO:GO:0016021	InterPro:ALMT	PANTHER:PTHR31086	PANTHER:PTHR31086:SF3
PFAM:PF11744	ProteinID:CDY52054	ProteinID:CDY52054.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDF2FD
UniProt:A0A078IRK2	MapMan:24.3.11	:	:	:	:

Description

BnaC03g74300DBnaC03g74300D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRK2]

Coordinates

chrLK033051:+:39829..41655

Molecular Weight (calculated)

48142.0 Da

IEP (calculated)

9.349

GRAVY (calculated)

0.189

Length

434 amino acids

Sequence
(BLAST)

001: MEMDLNAQVK KACFLQRLKD FPSNLKDGVT KRIKHVQKFG KDDPRRIIHS IKVGVSLTLV SMLYYVRPLY NSFGVSGMWA IVTVVVVSEF TVGGTLSKGL
101: NRAFATLIAG ALGVGAVHLA RLCGHKAEPI VLGILVFSLG SAVTFSRFFP RIKQRYDYGA LIFILTFSMV AVSGYRTDEI LVIAYQRLST ILIGGTICIL
201: VSIFVFPVWA GEDLHKLVAN NIIKLANSLE GFEGEYFPSS EKTSKETNSS VREYKGILTS ETTEDTLANL ARWEPGHGRF RLSHPWTKYF KIAGLVRQCA
301: IHFEVLNACV LSDAKAPQDF ISKILEPCSI MSREAGEALK AIAKSIKTMS RYHVCVNTHI KNSKNAIENL RLALKLSFPE TDKDLLEIIP GVTMASTLIY
401: IVNYVEKISE AVEELSVLAH FKETLDPKLS PELG

Best Arabidopsis Sequence Match ( AT3G11680.2 )
(BLAST)

001: MEMDLNAQEK KAGFFQRLQD FPSKLKDDVT KRVKNVQKFA KDDPRRIIHS MKVGVALTLV SLLYYVRPLY ISFGVTGMWA ILTVVVVFEF TVGGTLSKGL
101: NRGFATLIAG ALGVGAVHLA RFFGHQGEPI VLGILVFSLG AAATFSRFFP RIKQRYDYGA LIFILTFSFV AISGYRTDEI LIMAYQRLST ILIGGTICIL
201: VSIFICPVWA GEDLHKMIAN NINKLAKYLE GFEGEYFQPE KISKETSSCV REYKSILTSK STEDSLANLA RWEPGHGRFR LRHPWKKYLK IAGLVRQCAV
301: HLEILNGYVL SNDKAPQEFE SKIQEPITTM SREVGEALKA IAKSIKTMRN DSACVNAHID NSKKAIKNLK IALKSSYPET YKDLLEIIPG VTMASILIEV
401: VNCVEKIYEA VEEFSGLAHF KETLDSKLSA EIGQHQLLHR GCVKPVLDGD NEKEDNSSCH VLITVHDEGY LPTATAKNVL GAEKTRVDIV

Arabidopsis Description

Aluminum activated malate transporter family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LRV2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.