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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX77675 Canola cytosol, golgi, plasma membrane 93.83 95.39
Bra025011.1-P Field mustard plasma membrane 99.46 93.2
AT5G46610.1 Thale cress cytosol, peroxisome, plasma membrane 83.85 85.08
CDX90432 Canola cytosol 70.42 73.9
CDY01507 Canola cytosol 69.69 73.42
CDX87698 Canola plasma membrane 37.39 68.9
CDY59584 Canola cytosol, endoplasmic reticulum, plasma membrane 66.42 67.78
CDX87700 Canola cytosol 29.58 61.28
PGSC0003DMT400052884 Potato cytosol 59.17 60.59
Solyc08g006990.1.1 Tomato cytosol, peroxisome, plasma membrane 58.44 60.53
KRH77215 Soybean cytosol, peroxisome, plasma membrane 57.89 59.4
KRH58213 Soybean cytosol 56.44 59.24
KRH28280 Soybean peroxisome 57.53 59.03
KRH04324 Soybean cytosol 57.71 59.0
KRG90599 Soybean plasma membrane 50.09 55.65
Solyc06g061100.2.1 Tomato plasma membrane 52.45 55.36
KRG90598 Soybean endoplasmic reticulum, peroxisome, plasma membrane 51.91 55.11
KRG90597 Soybean golgi, mitochondrion 50.45 54.3
KRH36161 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 50.64 54.17
EER90182 Sorghum mitochondrion 51.18 53.31
Os10t0572100-01 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 50.82 52.93
TraesCS1D01G194000.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 49.73 51.8
TraesCS1A01G189900.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 49.73 51.7
TraesCS1B01G192000.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 49.55 51.61
HORVU1Hr1G049820.21 Barley endoplasmic reticulum, peroxisome 50.27 50.73
Zm00001d036652_P001 Maize mitochondrion 50.27 49.38
GSMUA_Achr4P21730_001 Banana plasma membrane 52.63 46.47
CDX97484 Canola plasma membrane 10.89 44.12
KRH04321 Soybean golgi 53.54 40.36
VIT_02s0012g01030.t01 Wine grape plasma membrane 53.72 40.16
CDY52054 Canola cytosol, peroxisome, plasma membrane 28.49 36.18
KRH36162 Soybean endoplasmic reticulum, plasma membrane, plastid 51.36 34.81
PGSC0003DMT400005384 Potato plasma membrane 42.11 34.78
CDY51721 Canola plasma membrane 29.04 33.97
CDX74373 Canola plasma membrane 29.4 33.96
CDY07155 Canola cytosol, peroxisome, plasma membrane 28.49 33.48
CDY01945 Canola plasma membrane 28.86 33.33
CDY01943 Canola plasma membrane 28.86 33.33
CDX97239 Canola plasma membrane 29.04 33.06
CDY01048 Canola cytosol, golgi, plasma membrane 29.04 32.79
CDY08504 Canola cytosol, golgi, plasma membrane 29.04 32.72
CDX91864 Canola plasma membrane 29.58 32.28
CDX97483 Canola plasma membrane 25.95 30.23
CDY24338 Canola plasma membrane 19.78 30.19
CDX95060 Canola cytosol, golgi, plasma membrane 27.59 29.92
CDX93562 Canola cytosol, golgi, plasma membrane 27.59 29.92
CDY31146 Canola cytosol, golgi, plasma membrane 27.04 29.92
CDX97487 Canola plasma membrane 20.87 29.79
CDX97489 Canola cytosol, golgi, plasma membrane 27.22 29.59
CDY30563 Canola plasma membrane 27.4 29.55
CDX77103 Canola golgi 27.4 29.55
CDY31147 Canola plasma membrane 26.32 29.41
CDY42102 Canola peroxisome 28.31 28.57
CDX84992 Canola peroxisome 28.31 28.57
CDY26161 Canola mitochondrion 28.68 28.21
CDY19211 Canola mitochondrion 28.31 27.66
CDX81872 Canola peroxisome, plastid, vacuole 14.16 26.99
CDY36105 Canola cytosol, peroxisome, plasma membrane 27.77 26.84
CDY24400 Canola cytosol, peroxisome, plasma membrane 28.13 26.77
CDY18521 Canola plasma membrane 28.13 23.31
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 11.8 20.25
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 28.31 12.05
CDX97488 Canola endoplasmic reticulum 0.0 0.0
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.0 0.0
Protein Annotations
EnsemblPlants:CDY63048EnsemblPlantsGene:GSBRNA2T00037878001GO:A0A078J8A4GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF2
PFAM:PF11744ProteinID:CDY63048ProteinID:CDY63048.1SEG:segTMHMM:TMhelixUniParc:UPI0004EE6C03
UniProt:A0A078J8A4MapMan:24.3.11::::
Description
BnaA06g40390DBnaA06g40390D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J8A4]
Coordinates
chrLK034238:-:4568..7268
Molecular Weight (calculated)
61388.0 Da
IEP (calculated)
8.095
GRAVY (calculated)
-0.102
Length
551 amino acids
Sequence
(BLAST)
001: MSNKVHERGV EMEEEGSKKA TRKIQELPKK ILKDIWKVGK DDPRRVKHAL KVGVSLTLVS LLYLLEPLFK GIGSNAMWAV LTVVVVLEFS AGATLCKGLN
101: RGLGTLIAGS LAFFIEFVAK DSGKIFRAVF IGASVFIIGA AITYLRFIPY IKKNYDYGML IFLLTFNLIT VSSYRVDAVI KIAHERFYTI AIGVGVCLCM
201: TLLFFPIWSG EDLHKSTVAK LQGLSFSIEA CVKEYFEEEE KDKETSDSSE DMIYDGYKTV LDSKSTDEAL AMYASWEPRH TRHCHRFPWQ HYVKVGGVLR
301: QFGYTVVALH GCLKTEIQTP RSIRVLFKDP CVRLAGEICK VLTELAASTQ NRRRCSPEIL SESLQVALQD LNSAIKSQPK LFFGSNDNVS QNDNSGRHNQ
401: NVSVTQQINK DANDNISHQN ETGSPLGQYT GTPRGGNKSR FGPNDGASSF SRLRADTLER RSTAATGERR ILMKQLSRIV VMTSLEFSEA LPFAAFASLL
501: VEMVARLDNV IEEVEELGTS ACFKEYNGNV VDRTDVEVRV EKPADLVVGV E
Best Arabidopsis Sequence Match ( AT5G46610.1 )
(BLAST)
001: MSDRVHERSM GMEEEGSTKN MKTKVLELPT KIKKILKNIW KVGKDDPRRV KHALKVGVSL TLVSLLYLME PLFKGIGNSA IWAVMTVVVV LEFSAGATLC
101: KGLNRGLGTL IAGSLAFFIE FVANDSGKIF RAIFIGAAVF IIGALITYLR FIPYIKKNYD YGMLIFLLTF NLITVSSYRV DTVIKIAHER FYTIAMGVGI
201: CLLMSLLVFP IWSGEDLHKS TVAKLQGLSY SIEACVNEYF EEEEKDEETS DLSEDTIYNG YKTVLDSKSA DEALAMYASW EPRHTRHCHR FPWKHYVKVG
301: SVLRQFGYTV VALHGCLKTE IQTPRPLRGL FKDPCVRLAG EICKVLSELA ASIRNRRHCS PEILSDSLQV ALQDLNTAIK SQPKLFLGSS QNGNVSQGNS
401: GRHNPNVAVS QHINKDTNEA ASYQNTGTPR GERMSRFGPN VSFSRLRADT LERRSAAATN ERKILRQQLS RIVVLTSLEF SEALPFAAFA SLLVEMVARL
501: DNVIEEVEEL GTIACFKDYD NNVDQKDVEV RVEKPADLVV GVE
Arabidopsis Description
ALMT14Aluminum-activated malate transporter 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS22]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.