Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97488 | Canola | endoplasmic reticulum | 2.75 | 92.86 |
| CDY31147 | Canola | plasma membrane | 94.5 | 90.67 |
| CDX97484 | Canola | plasma membrane | 23.04 | 80.15 |
| CDX97487 | Canola | plasma membrane | 63.0 | 77.2 |
| AT1G08430.1 | Thale cress | golgi | 76.53 | 73.43 |
| CDY31146 | Canola | cytosol, golgi, plasma membrane | 74.21 | 70.48 |
| CDX95060 | Canola | cytosol, golgi, plasma membrane | 75.26 | 70.08 |
| CDX93562 | Canola | cytosol, golgi, plasma membrane | 75.05 | 69.88 |
| CDX97489 | Canola | cytosol, golgi, plasma membrane | 74.0 | 69.03 |
| CDX97485 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 42.71 | 62.93 |
| CDX77103 | Canola | golgi | 62.37 | 57.73 |
| CDY30563 | Canola | plasma membrane | 62.16 | 57.53 |
| Solyc11g068970.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 46.93 | 47.54 |
| VIT_06s0009g00450.t01 | Wine grape | plasma membrane | 47.78 | 47.18 |
| KRH30357 | Soybean | plasma membrane | 47.36 | 46.38 |
| KRH25315 | Soybean | plasma membrane | 46.72 | 45.95 |
| PGSC0003DMT400050498 | Potato | cytosol, peroxisome, plasma membrane | 41.65 | 45.08 |
| GSMUA_Achr8P30390_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 39.75 | 44.87 |
| CDY52054 | Canola | cytosol, peroxisome, plasma membrane | 39.53 | 43.09 |
| TraesCS2B01G314100.1 | Wheat | plasma membrane | 40.8 | 42.6 |
| GSMUA_Achr6P35650_001 | Banana | plastid | 40.8 | 42.6 |
| KXG26278 | Sorghum | cytosol, peroxisome, plasma membrane | 38.9 | 41.26 |
| Os04t0417000-01 | Rice | cytosol, plastid, vacuole | 39.53 | 41.1 |
| TraesCS2A01G297900.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 35.73 | 40.62 |
| Zm00001d025373_P001 | Maize | cytosol, peroxisome, plasma membrane | 37.63 | 40.55 |
| HORVU2Hr1G073840.3 | Barley | peroxisome, plasma membrane | 40.38 | 40.21 |
| Zm00001d003749_P001 | Maize | plasma membrane | 39.32 | 40.09 |
| TraesCS2D01G295900.1 | Wheat | plasma membrane | 40.8 | 39.88 |
| OQU81544 | Sorghum | peroxisome | 37.63 | 39.56 |
| CDY01048 | Canola | cytosol, golgi, plasma membrane | 40.59 | 39.34 |
| CDY08504 | Canola | cytosol, golgi, plasma membrane | 40.38 | 39.06 |
| OQU81543 | Sorghum | cytosol, peroxisome, plasma membrane | 34.46 | 38.17 |
| TraesCS4D01G283600.1 | Wheat | plasma membrane | 36.79 | 37.34 |
| OQU75600 | Sorghum | cytosol | 15.64 | 36.1 |
| CDX87698 | Canola | plasma membrane | 22.62 | 35.79 |
| CDY07155 | Canola | cytosol, peroxisome, plasma membrane | 34.67 | 34.97 |
| CDY01943 | Canola | plasma membrane | 34.67 | 34.38 |
| CDY01945 | Canola | plasma membrane | 34.67 | 34.38 |
| CDY51721 | Canola | plasma membrane | 34.04 | 34.18 |
| CDX74373 | Canola | plasma membrane | 34.46 | 34.17 |
| CDX97239 | Canola | plasma membrane | 34.46 | 33.68 |
| CDX91864 | Canola | plasma membrane | 34.04 | 31.88 |
| CDY01507 | Canola | cytosol | 31.29 | 28.3 |
| CDX90432 | Canola | cytosol | 31.29 | 28.19 |
| CDY59584 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 30.66 | 26.85 |
| CDY24338 | Canola | plasma membrane | 20.3 | 26.59 |
| CDX77675 | Canola | cytosol, golgi, plasma membrane | 29.81 | 26.01 |
| CDY63048 | Canola | plasma membrane | 30.23 | 25.95 |
| CDY26161 | Canola | mitochondrion | 27.7 | 23.39 |
| CDY19211 | Canola | mitochondrion | 27.7 | 23.23 |
| CDX84992 | Canola | peroxisome | 26.43 | 22.89 |
| CDY42102 | Canola | peroxisome | 26.22 | 22.71 |
| CDY36105 | Canola | cytosol, peroxisome, plasma membrane | 26.85 | 22.28 |
| CDY24400 | Canola | cytosol, peroxisome, plasma membrane | 26.85 | 21.93 |
| CDX81872 | Canola | peroxisome, plastid, vacuole | 12.47 | 20.42 |
| CDY18521 | Canola | plasma membrane | 27.48 | 19.55 |
| CDX87700 | Canola | cytosol | 8.46 | 15.04 |
| CDX95521 | Canola | endoplasmic reticulum, mitochondrion, nucleus, plasma membrane | 27.7 | 10.12 |
| CDY18522 | Canola | cytosol, golgi, nucleus, plastid | 0.21 | 0.14 |
Protein Annotations
| EnsemblPlants:CDX97483 | EnsemblPlantsGene:GSBRNA2T00104676001 | GO:A0A078EDR3 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0015743 | GO:GO:0016020 | GO:GO:0016021 | InterPro:ALMT | PANTHER:PTHR31086 | PANTHER:PTHR31086:SF22 |
| PFAM:PF11744 | ProteinID:CDX97483 | ProteinID:CDX97483.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EEF5E5 |
| MapMan:24.3.11 | : | : | : | : | : |
Description
BnaC08g13480D
Coordinates
chrLK031899:+:1208328..1210615
Molecular Weight (calculated)
52767.0 Da
IEP (calculated)
7.616
GRAVY (calculated)
0.060
Length
473 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKLREIVRE GRRVGEEDPR RIVHSFKVGV ALVLVSSFYY YQPFGPFTDY FGINAMWAVM TVVVVFEFSV GATLSKGLNR GVATLVAGGL ALGAHQLASL
101: SGRTIEPILL ATFVFVTAAL ATFVRFFPRV KATFDYGMLI FILTFSLISL SQFRDEEILD LAESRLSTVL VGGVSCILIS IFVCPVWAGQ DLHSLLVSNL
201: DTLSHFLQEF GDEYFEARTY GNIKVVEKRR RNLERYKSVL NSKSDEDSLA NFAKWEPPHG KFGFRHPWKQ YLVVAALVRQ CAHRIDALNS YINSNFQIPI
301: DIKKKLEEPF RRMSLESGKA MKEASISLKK MTKSSSYDIH IINSQSACKA LSTLLKSGIL NDVEPLQMVS LLTTVSLLND IVNITEKISE SVRELASAAR
401: FRNKMKPTEP SVSLKKLDSG STGCAMPINS RDGDHVVTIL LSDDDKDDID DDDTSNIVGM MPEHSLGVRI LQI
101: SGRTIEPILL ATFVFVTAAL ATFVRFFPRV KATFDYGMLI FILTFSLISL SQFRDEEILD LAESRLSTVL VGGVSCILIS IFVCPVWAGQ DLHSLLVSNL
201: DTLSHFLQEF GDEYFEARTY GNIKVVEKRR RNLERYKSVL NSKSDEDSLA NFAKWEPPHG KFGFRHPWKQ YLVVAALVRQ CAHRIDALNS YINSNFQIPI
301: DIKKKLEEPF RRMSLESGKA MKEASISLKK MTKSSSYDIH IINSQSACKA LSTLLKSGIL NDVEPLQMVS LLTTVSLLND IVNITEKISE SVRELASAAR
401: FRNKMKPTEP SVSLKKLDSG STGCAMPINS RDGDHVVTIL LSDDDKDDID DDDTSNIVGM MPEHSLGVRI LQI
001: MEKVREIVRE GIRVGNEDPR RIIHAFKVGL ALVLVSSFYY YQPFGPFTDY FGINAMWAVM TVVVVFEFSV GATLGKGLNR GVATLVAGGL GIGAHQLARL
101: SGATVEPILL VMLVFVQAAL STFVRFFPWV KTKFDYGILI FILTFALISL SGFRDEEIMD LAESRLSTVV IGGVSCILIS IFVCPVWAGQ DLHSLLASNF
201: DTLSHFLQDF GDEYFEAREK GDYKVVEKRK KNLERYKSVL DSKSDEEALA NYAEWEPPHG QFRFRHPWKQ YVAVGALLRQ CAYRIDALNS YINSDFQIPV
301: DIKKKLETPL RRMSSESGNS MKEMSISLKQ MIKSSSSDIH VSNSQAACKS LSTLLKSGIL NDVEPLQMIS LMTTVSMLID IVNLTEKISE SVHELASAAR
401: FKNKMRPTVL YEKSDSGSIG RAMPIDSHED HHVVTVLHDV DNDRSNNVDD SRGGSSQDSC HHVAIKIVDD NSNHEKHEDG EIHVHTLSNG HLQ
101: SGATVEPILL VMLVFVQAAL STFVRFFPWV KTKFDYGILI FILTFALISL SGFRDEEIMD LAESRLSTVV IGGVSCILIS IFVCPVWAGQ DLHSLLASNF
201: DTLSHFLQDF GDEYFEAREK GDYKVVEKRK KNLERYKSVL DSKSDEEALA NYAEWEPPHG QFRFRHPWKQ YVAVGALLRQ CAYRIDALNS YINSDFQIPV
301: DIKKKLETPL RRMSSESGNS MKEMSISLKQ MIKSSSSDIH VSNSQAACKS LSTLLKSGIL NDVEPLQMIS LMTTVSMLID IVNLTEKISE SVHELASAAR
401: FKNKMRPTVL YEKSDSGSIG RAMPIDSHED HHVVTVLHDV DNDRSNNVDD SRGGSSQDSC HHVAIKIVDD NSNHEKHEDG EIHVHTLSNG HLQ
Arabidopsis Description
ALMT1Aluminum-activated malate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE9]
SUBAcon: [golgi]
SUBAcon: [golgi]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.