CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX97484	Canola	plasma membrane	27.72	78.68
CDX97483	Canola	plasma membrane	77.2	63.0
CDY31147	Canola	plasma membrane	78.24	61.26
AT1G08430.1	Thale cress	golgi	65.54	51.32
CDY31146	Canola	cytosol, golgi, plasma membrane	63.99	49.6
CDX93562	Canola	cytosol, golgi, plasma membrane	65.03	49.41
CDX95060	Canola	cytosol, golgi, plasma membrane	65.03	49.41
CDX97489	Canola	cytosol, golgi, plasma membrane	63.99	48.72
CDX77103	Canola	golgi	55.18	41.68
CDY30563	Canola	plasma membrane	54.92	41.49
CDX97485	Canola	endoplasmic reticulum, extracellular, plasma membrane	30.05	36.14
Solyc11g068970.1.1	Tomato	cytosol, peroxisome, plasma membrane	42.49	35.12
VIT_06s0009g00450.t01	Wine grape	plasma membrane	43.01	34.66
KRH30357	Soybean	plasma membrane	42.49	33.95
KRH25315	Soybean	plasma membrane	41.97	33.68
CDY52054	Canola	cytosol, peroxisome, plasma membrane	37.05	32.95
GSMUA_Achr8P30390_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	34.97	32.22
PGSC0003DMT400050498	Potato	cytosol, peroxisome, plasma membrane	36.01	31.81
TraesCS2A01G297900.1	Wheat	endoplasmic reticulum, golgi, plasma membrane	34.2	31.73
TraesCS2B01G314100.1	Wheat	plasma membrane	36.27	30.91
GSMUA_Achr6P35650_001	Banana	plastid	35.49	30.24
Os04t0417000-01	Rice	cytosol, plastid, vacuole	35.23	29.89
CDY01048	Canola	cytosol, golgi, plasma membrane	37.56	29.71
KXG26278	Sorghum	cytosol, peroxisome, plasma membrane	34.2	29.6
CDY08504	Canola	cytosol, golgi, plasma membrane	37.31	29.45
HORVU2Hr1G073840.3	Barley	peroxisome, plasma membrane	35.75	29.05
TraesCS2D01G295900.1	Wheat	plasma membrane	36.27	28.93
Zm00001d003749_P001	Maize	plasma membrane	34.46	28.66
CDX87698	Canola	plasma membrane	21.76	28.09
Zm00001d025373_P001	Maize	cytosol, peroxisome, plasma membrane	31.87	28.02
OQU81544	Sorghum	peroxisome	32.64	28.0
TraesCS4D01G283600.1	Wheat	plasma membrane	33.42	27.68
CDY01943	Canola	plasma membrane	32.38	26.21
CDY01945	Canola	plasma membrane	32.38	26.21
CDY07155	Canola	cytosol, peroxisome, plasma membrane	31.35	25.8
OQU81543	Sorghum	cytosol, peroxisome, plasma membrane	28.5	25.76
CDX97239	Canola	plasma membrane	32.12	25.62
CDX74373	Canola	plasma membrane	31.61	25.58
CDY51721	Canola	plasma membrane	31.09	25.48
CDX91864	Canola	plasma membrane	31.35	23.96
CDY01507	Canola	cytosol	30.31	22.37
CDX90432	Canola	cytosol	30.31	22.29
CDY59584	Canola	cytosol, endoplasmic reticulum, plasma membrane	30.57	21.85
CDX77675	Canola	cytosol, golgi, plasma membrane	29.53	21.03
OQU75600	Sorghum	cytosol	11.14	20.98
CDY63048	Canola	plasma membrane	29.79	20.87
CDX81872	Canola	peroxisome, plastid, vacuole	13.73	18.34
CDY26161	Canola	mitochondrion	25.39	17.5
CDY19211	Canola	mitochondrion	25.39	17.38
CDY24338	Canola	plasma membrane	16.06	17.17
CDX84992	Canola	peroxisome	23.32	16.48
CDY42102	Canola	peroxisome	23.32	16.48
CDY36105	Canola	cytosol, peroxisome, plasma membrane	23.32	15.79
CDY24400	Canola	cytosol, peroxisome, plasma membrane	23.32	15.54
CDY18521	Canola	plasma membrane	25.65	14.89
CDX87700	Canola	cytosol	9.33	13.53
CDX95521	Canola	endoplasmic reticulum, mitochondrion, nucleus, plasma membrane	25.65	7.64
CDY18522	Canola	cytosol, golgi, nucleus, plastid	0.0	0.0
CDX97488	Canola	endoplasmic reticulum	0.0	0.0

Protein Annotations

EnsemblPlants:CDX97487	EnsemblPlantsGene:GSBRNA2T00104680001	GO:A0A078E8X1	GO:GO:0006810	GO:GO:0008150	GO:GO:0015743
InterPro:ALMT	PANTHER:PTHR31086	PANTHER:PTHR31086:SF22	PFAM:PF11744	ProteinID:CDX97487	ProteinID:CDX97487.1
SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EDD279	MapMan:24.3.11	:	:

Description

BnaC08g13520D

Coordinates

chrLK031899:+:1226459..1229953

Molecular Weight (calculated)

43155.6 Da

IEP (calculated)

10.104

GRAVY (calculated)

0.330

Length

386 amino acids

Sequence
(BLAST)

001: MEKLREIVRE GRRVGEEDPR RIVHSFKAGV ALVLVSSFYY YQPFGPFTDY FGINAMWAVM TVVVVFEFSV GATLSKGLNR GVATLVAGGL ALGAHQLASL
101: SGRTIEPILL ATFVFVTAAL ATFVRFFPRV KETIDYGMLI FILTFSLISL SHCILISSLS VLSGLDKTFI LFLSPTWTHS PTSFKSLEVN ILKPESMETS
201: KWLRRGEVIL RGIRVFLTQK VMKILWQCAH RIDALNSYIN SDFQIPIDIK KKLEEPFRRM SMESGKALKE ASISLKKMMK SSSYDIHIIN SQSACKALST
301: LLKSGILNDV EPLQMVSLLT TVSLLNDIVH LTEKISESVR ELASAASFKN KMKPTEPTVS RSRILEALVV PCQLILVMVI MLSRSY

Best Arabidopsis Sequence Match ( AT1G08430.1 )
(BLAST)

001: MEKVREIVRE GIRVGNEDPR RIIHAFKVGL ALVLVSSFYY YQPFGPFTDY FGINAMWAVM TVVVVFEFSV GATLGKGLNR GVATLVAGGL GIGAHQLARL
101: SGATVEPILL VMLVFVQAAL STFVRFFPWV KTKFDYGILI FILTFALISL SGFRDEEIMD LAESRLSTVV IGGVSCILIS IFVCPVWAGQ DLHSLLASNF
201: DTLSHFLQDF GDEYFEAREK GDYKVVEKRK KNLERYKSVL DSKSDEEALA NYAEWEPPHG QFRFRHPWKQ YVAVGALLRQ CAYRIDALNS YINSDFQIPV
301: DIKKKLETPL RRMSSESGNS MKEMSISLKQ MIKSSSSDIH VSNSQAACKS LSTLLKSGIL NDVEPLQMIS LMTTVSMLID IVNLTEKISE SVHELASAAR
401: FKNKMRPTVL YEKSDSGSIG RAMPIDSHED HHVVTVLHDV DNDRSNNVDD SRGGSSQDSC HHVAIKIVDD NSNHEKHEDG EIHVHTLSNG HLQ

Arabidopsis Description

ALMT1Aluminum-activated malate transporter 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJE9]
SUBAcon: [golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.