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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 2
  • plasma membrane 3
  • plastid 1
  • extracellular 1
  • vacuole 1
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
Plant-mPloc:plasma membrane, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra022048.1-P Field mustard cytosol, endoplasmic reticulum, plasma membrane 100.0 100.0
CDX87700 Canola cytosol 48.89 99.25
CDX87698 Canola plasma membrane 51.3 92.64
AT5G46600.1 Thale cress cytosol, endoplasmic reticulum, plasma membrane 78.15 78.29
CDX90432 Canola cytosol 67.96 69.9
CDY01507 Canola cytosol 67.41 69.6
CDY63048 Canola plasma membrane 67.78 66.42
CDX77675 Canola cytosol, golgi, plasma membrane 66.48 66.24
Solyc08g006990.1.1 Tomato cytosol, peroxisome, plasma membrane 56.67 57.52
PGSC0003DMT400052884 Potato cytosol 57.22 57.43
KRH77215 Soybean cytosol, peroxisome, plasma membrane 54.63 54.93
KRH28280 Soybean peroxisome 54.26 54.56
KRH58213 Soybean cytosol 52.78 54.29
Solyc06g061100.2.1 Tomato plasma membrane 52.22 54.02
KRG90598 Soybean endoplasmic reticulum, peroxisome, plasma membrane 51.3 53.37
KRG90599 Soybean plasma membrane 48.7 53.02
KRH04324 Soybean cytosol 52.59 52.69
EER90182 Sorghum mitochondrion 50.74 51.8
Os10t0572100-01 Rice endoplasmic reticulum, peroxisome, plasma membrane, plastid 50.56 51.61
KRH36161 Soybean endoplasmic reticulum, peroxisome, plasma membrane, plastid 48.89 51.26
TraesCS1D01G194000.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 50.19 51.23
TraesCS1A01G189900.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 50.19 51.13
TraesCS1B01G192000.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 50.0 51.04
KRG90597 Soybean golgi, mitochondrion 47.96 50.59
HORVU1Hr1G049820.21 Barley endoplasmic reticulum, peroxisome 50.37 49.82
Zm00001d036652_P001 Maize mitochondrion 49.63 47.77
GSMUA_Achr4P21730_001 Banana plasma membrane 52.59 45.51
CDX97484 Canola plasma membrane 10.93 43.38
VIT_02s0012g01030.t01 Wine grape plasma membrane 51.67 37.86
KRH04321 Soybean golgi 50.37 37.21
PGSC0003DMT400005384 Potato plasma membrane 41.85 33.88
CDY52054 Canola cytosol, peroxisome, plasma membrane 26.85 33.41
KRH36162 Soybean endoplasmic reticulum, plasma membrane, plastid 49.26 32.72
CDY51721 Canola plasma membrane 28.15 32.27
CDY01943 Canola plasma membrane 27.96 31.66
CDY01945 Canola plasma membrane 27.96 31.66
CDY07155 Canola cytosol, peroxisome, plasma membrane 27.41 31.56
CDX74373 Canola plasma membrane 27.78 31.45
CDX97239 Canola plasma membrane 27.96 31.2
CDX97483 Canola plasma membrane 26.85 30.66
CDX97487 Canola plasma membrane 21.85 30.57
CDY31146 Canola cytosol, golgi, plasma membrane 28.15 30.52
CDX91864 Canola plasma membrane 28.33 30.3
CDY31147 Canola plasma membrane 27.22 29.82
CDX97489 Canola cytosol, golgi, plasma membrane 27.96 29.78
CDY08504 Canola cytosol, golgi, plasma membrane 26.85 29.65
CDX93562 Canola cytosol, golgi, plasma membrane 27.78 29.53
CDY01048 Canola cytosol, golgi, plasma membrane 26.67 29.51
CDX95060 Canola cytosol, golgi, plasma membrane 27.59 29.33
CDY24338 Canola plasma membrane 19.44 29.09
CDX77103 Canola golgi 27.04 28.57
CDY30563 Canola plasma membrane 27.04 28.57
CDY42102 Canola peroxisome 27.59 27.29
CDX84992 Canola peroxisome 27.59 27.29
CDY26161 Canola mitochondrion 27.96 26.96
CDY19211 Canola mitochondrion 27.96 26.77
CDX81872 Canola peroxisome, plastid, vacuole 14.26 26.64
CDY24400 Canola cytosol, peroxisome, plasma membrane 27.78 25.91
CDY36105 Canola cytosol, peroxisome, plasma membrane 27.22 25.79
CDY18521 Canola plasma membrane 28.89 23.46
CDX97485 Canola endoplasmic reticulum, extracellular, plasma membrane 12.22 20.56
CDX95521 Canola endoplasmic reticulum, mitochondrion, nucleus, plasma membrane 29.07 12.12
CDY18522 Canola cytosol, golgi, nucleus, plastid 0.0 0.0
CDX97488 Canola endoplasmic reticulum 0.0 0.0
Protein Annotations
EnsemblPlants:CDY59584EnsemblPlantsGene:GSBRNA2T00027405001GO:A0A078J5L9GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0015743GO:GO:0016020GO:GO:0016021InterPro:ALMTPANTHER:PTHR31086PANTHER:PTHR31086:SF2
PFAM:PF11744ProteinID:CDY59584ProteinID:CDY59584.1SEG:segTMHMM:TMhelixUniParc:UPI0002545F3D
UniProt:A0A078J5L9MapMan:24.3.11::::
Description
BnaA02g36790DBnaA02g36790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J5L9]
Coordinates
chrLK033783:-:33925..42566
Molecular Weight (calculated)
60539.6 Da
IEP (calculated)
9.476
GRAVY (calculated)
-0.083
Length
540 amino acids
Sequence
(BLAST)
001: MWNKSMEITM EDEGSRRTRK KIEHPKKMKN ILKSLWNVGK EDTRRLKHAL KVGVSLTLVS LLYLMEPFFK GIGKNAIWAV MTVVVVLEFS AGATLRKGLN
101: RGIGTLIAGS LAYLIEFVAV NSGKIFGGIF IGAAVFIIGS TITYMRFVPY VKKNYDYGML VFLLTFNLIT VSSYRIDTVI KIAHQRLLTI AMGIGICLFM
201: SLLVFPIWSG DDLHMSTVTK FQGLSRSIEA CVKKYFEEKE RDKEDSDSES DDDDVIYKGY KTVLDSKSSD EALAMYASWE PRHTLRCNKF PSQQYTKIGS
301: VLRKFGHTVV ALHGCLQTEI QTPRSIRTLF KDPCVRLAGE ICKVLSELSE SILNKRHCSP EILSDNLEVA LKDLNAAIKS QPKLFLGSNL HSDITNKHLN
401: RNVSYYNDSN NVDGNVLSQT TPQNVTVSQA RFNSTVSLSS FMGQTSHRKS VNKPGPVGEK RRFRKQLSKA AVMKSLEFSE ALPFAAFASL LVEMVARLGT
501: VIDEVEELGS ISCFKEYDKI VDRTDVEVRI EKPVDLVVGD
Best Arabidopsis Sequence Match ( AT5G46600.1 )
(BLAST)
001: MGYKVEARSM EISMEDEDSR KKRKKGLNLP KKMKKILRNL WNVGKEDPRR VIHALKVGVA LTLVSLLYLM EPFFEGVGKN ALWAVMTVVV VLEFSAGATL
101: RKGLNRGLGT LIAGSLAFFI EWVAIHSGKI LGGIFIGTSV FTIGSMITYM RFIPYIKKNY DYGMLVFLLT FNLITVSSYR VDTVIKIAHE RLYTIGMGIG
201: ICLFMSLLFF PIWSGDDLHK STITKLQGLS RCIEACVSEY FEEKLKDNET SDSESDDEDL IYNGYNTVLD SKSADEALAM YAKWEPRHTR RCNKFPSQQY
301: IKVGSVLRKF GYTVVALHGC LQTEIQTPRS IRVLFKDPCV RLAGEICKVL SELSESIQNR RHCSSEILSD SLEAALKDLN STIKSQPKLF LGSNLHSNIT
401: NKHLNGHVSY YNETNSNGTV SYHNDNNTNG CVLGETIEEN DTVSPLPLNS VVSLSSLRSV KKSAATGEKR RLRKQLSKIA VMKSLEFSEA LPFAAFASLL
501: VEMVARLDTV IDEVEELGTI ACFKEYDKTV EVRIENRLI
Arabidopsis Description
ALMT13Aluminum-activated malate transporter 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LS23]
SUBAcon: [endoplasmic reticulum,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.