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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • peroxisome 1
  • mitochondrion 1
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d017570_P001 Maize cytosol, peroxisome, plasma membrane 86.8 88.75
Zm00001d017571_P001 Maize peroxisome 84.6 86.68
TraesCS6D01G236500.1 Wheat plasma membrane 74.8 76.95
TraesCS6A01G255200.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 74.4 76.54
TraesCS6B01G270300.1 Wheat cytosol, nucleus, peroxisome 74.4 76.23
Os02t0673100-02 Rice cytosol 73.4 71.82
EES12682 Sorghum cytosol 62.4 63.29
GSMUA_Achr2P09980_001 Banana cytosol 51.0 58.22
GSMUA_AchrUn_... Banana cytosol 52.8 56.9
VIT_02s0025g02320.t01 Wine grape cytosol 30.6 53.68
GSMUA_Achr9P00890_001 Banana cytosol, peroxisome, plasma membrane 48.2 52.16
VIT_15s0046g00130.t01 Wine grape plasma membrane 48.8 49.39
AT4G00910.1 Thale cress plasma membrane 47.0 48.45
CDY51721 Canola plasma membrane 45.6 48.41
CDY01943 Canola plasma membrane 46.0 48.22
CDX74373 Canola plasma membrane 46.0 48.22
CDY01945 Canola plasma membrane 45.8 48.01
Bra037402.1-P Field mustard cytosol, peroxisome, plasma membrane 45.2 47.98
CDY07155 Canola cytosol, peroxisome, plasma membrane 45.0 47.97
CDX97239 Canola plasma membrane 46.0 47.52
Solyc01g096140.2.1 Tomato cytosol, peroxisome, plasma membrane 46.6 46.79
Bra008542.1-P Field mustard plasma membrane 42.2 46.58
CDX91864 Canola plasma membrane 46.8 46.34
KRG92525 Soybean plasma membrane 45.6 46.06
KRH34268 Soybean plasma membrane 44.4 44.76
Bra000933.1-P Field mustard plasma membrane 47.0 44.51
Solyc08g082950.2.1 Tomato plasma membrane 42.0 44.12
PGSC0003DMT400000350 Potato endoplasmic reticulum, golgi 31.0 42.82
KXG26278 Sorghum cytosol, peroxisome, plasma membrane 37.6 42.15
EER89808 Sorghum cytosol, endoplasmic reticulum, peroxisome, plastid 51.2 38.04
OQU81543 Sorghum cytosol, peroxisome, plasma membrane 31.8 37.24
OQU81544 Sorghum peroxisome 33.4 37.11
EER90182 Sorghum mitochondrion 33.2 31.38
OQU75600 Sorghum cytosol 12.2 29.76
OQU85465 Sorghum golgi 28.6 27.61
EER89585 Sorghum plastid 30.2 24.51
Protein Annotations
MapMan:24.3.11EntrezGene:8076043InterPro:ALMTUniProt:C5Y1A4EnsemblPlants:EES05741ProteinID:EES05741
ProteinID:EES05741.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005773GO:GO:0006810GO:GO:0008150GO:GO:0009705GO:GO:0015140
GO:GO:0015743GO:GO:0016020GO:GO:0016021GO:GO:0071423PFAM:PF11744PANTHER:PTHR31086
PANTHER:PTHR31086:SF4EnsemblPlantsGene:SORBI_3004G284700unigene:Sbi.11183TMHMM:TMhelixUniParc:UPI0001A85EF1RefSeq:XP_002452765.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr4:+:62718591..62721146
Molecular Weight (calculated)
53877.5 Da
IEP (calculated)
5.523
GRAVY (calculated)
0.141
Length
500 amino acids
Sequence
(BLAST)
001: MDAAAREAQS GLEWRVTVPE GATVTMEEHE AGGAAARACA WLLACFATAW SWVAGFARKV WRIAADDPRK AVHGLKVGLA LALVSVFYYT RPLYDGVGGA
101: AMWAIMTVVV VFEYTVGGSV YKCFNRVVAT ASAGVLALGV HWVADRSGEL EPVIVTGSLF LLAAAATFSR FIPTVKARFD YGVTIFILTY SLVAVSGYRV
201: DQLAALAQQR LSTIAIGIFL CLAVSMLICP VWSGAELHLL TTRNMDKLAD AVEACVEDYF AAEEPTPAAR QSTKSKSDGY KCVLNSKASE DAQANLARWE
301: PAHGRFGFRH PYAQYAKVGA AMRACAYCVE ALSSCARAEV QAPPHVKRLL RDVCARVGAR CARVLREASR SVATMTTSSS SRTLDFAVAD MNTAVQELQG
401: DMRTLPSTVL AAKLLAAETT SLMDTMPVFT VASLLVEISA RVEGVVDAVD ELATLASFKQ VDDDDDDDDK KGETEMTIKV HPLNEPDTDE ESPENKTRKA
Best Arabidopsis Sequence Match ( AT4G00910.1 )
(BLAST)
001: MATQEAGKLE WRISVDNGTT ERLVPRSGLS KRIFLWLKDL VMKVIMERVA KFMRKAWRIG ADDPAKVVHC LKVGLALSLV SIFYYMRPLY DGVGGNAMWA
101: IMTVVVVFES NVGATFCKCV NRVVATILAG SLGIAVHWVA TQSGKAEVFV IGCSVFLFAF AATYSRFVPS FKARFDYGAM IFILTFSLVS VGGYRVDKLV
201: ELAQQRVSTI AIGTSICIII TVFFCPIWAG SQLHRLIERN LEKLADSLDG CVAEYFKENE VSTNRNEDEN TNMKLQGFKC VLNSKGTEEA MANLARWEPA
301: HGSFNFRHPW KLYVKIGAAM RRCAYCLENL SICINYETEA PDQVKNHFGE ACMKLSSASS KILRELADMM KNTRKSSKMD FLVFDMNSAV QELQETLKNV
401: PIETNKPEEV PSEEENKVDS EERTTSMSLH EVLPVATLVS LLIENAARIQ TAVEAVDELA NLADFEQDSK KKTGDNNTKQ PPLSS
Arabidopsis Description
Aluminium activated malate transporter family protein [Source:TAIR;Acc:AT4G00910]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.