Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400079381 | Potato | nucleus | 91.33 | 94.18 |
| VIT_11s0016g05510.t01 | Wine grape | nucleus | 33.67 | 49.55 |
| Bra015008.1-P | Field mustard | nucleus | 29.64 | 45.51 |
| CDX77461 | Canola | nucleus | 29.64 | 45.51 |
| CDX85164 | Canola | nucleus | 29.44 | 45.2 |
| KRH20129 | Soybean | mitochondrion, nucleus | 36.29 | 44.66 |
| KRH54950 | Soybean | nucleus | 29.84 | 43.92 |
| Bra028356.1-P | Field mustard | nucleus | 28.83 | 43.47 |
| CDY18077 | Canola | nucleus | 28.83 | 43.47 |
| AT3G24150.1 | Thale cress | nucleus | 30.04 | 43.44 |
| KRH03673 | Soybean | mitochondrion, nucleus | 36.09 | 42.42 |
| CDY45344 | Canola | nucleus | 18.75 | 38.91 |
| GSMUA_Achr11P... | Banana | nucleus | 28.02 | 36.39 |
| Solyc08g059700.1.1 | Tomato | nucleus | 24.8 | 36.28 |
| GSMUA_Achr6P20490_001 | Banana | mitochondrion | 27.42 | 35.98 |
| CDY45343 | Canola | nucleus | 1.21 | 20.0 |
Protein Annotations
| EnsemblPlants:Solyc07g008100.2.1 | EnsemblPlantsGene:Solyc07g008100.2 | Gene3D:1.10.246.20 | PANTHER:PTHR35300 | PANTHER:PTHR35300:SF2 | UniParc:UPI000276B1F8 |
| UniProt:K4CBS9 | MapMan:15.5.53.5.2 | : | : | : | : |
Description
No Description!
Coordinates
chr7:+:2816985..2820874
Molecular Weight (calculated)
55787.1 Da
IEP (calculated)
8.854
GRAVY (calculated)
-0.650
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRPGPRPYE CVRRAWHSDR HQPMRGSITQ QIFRVVIERH SVVTKKNREW QQKLPVVVLK AEEIMYSKAN SEAEYMDPET LWDRVNDAID TIIRRDETTE
101: IGQLLPPCVE AALNLGCIPE RASRSQRNSN PRSYLSPRTQ EPHCVPPKVF SRSANELNSN SSLPIRSTNQ PLFLRPTNVN TSRLASEFDR PVMPRINNLG
201: ASPSAKAIVI PESSSSLDVG SVYPLFYGTD LQPEVSPLVL REPQHNVIVG KPIYPSIVEP AKISCFPSLF PSRRDDVQEK SCQADFRDKT RRMPELDCDL
301: SLRLGLSANS GLQLQQGQIS CIGDFRPSGN SNEGDQFKLL STSKGKEFTF FPAESANSPS GLPSRLHRAH GNLEGYGLNT ETLFMKHKMP VRPSDGFQER
401: YGFEAVSTSK DKEYPFFFAE SANSHSGLQA GRANLEGEDQ TAATLLRKRK MPIHNNMELG QFLWQDERTL NRFPGQMKRP EKASAAVYDK GGNFVP
101: IGQLLPPCVE AALNLGCIPE RASRSQRNSN PRSYLSPRTQ EPHCVPPKVF SRSANELNSN SSLPIRSTNQ PLFLRPTNVN TSRLASEFDR PVMPRINNLG
201: ASPSAKAIVI PESSSSLDVG SVYPLFYGTD LQPEVSPLVL REPQHNVIVG KPIYPSIVEP AKISCFPSLF PSRRDDVQEK SCQADFRDKT RRMPELDCDL
301: SLRLGLSANS GLQLQQGQIS CIGDFRPSGN SNEGDQFKLL STSKGKEFTF FPAESANSPS GLPSRLHRAH GNLEGYGLNT ETLFMKHKMP VRPSDGFQER
401: YGFEAVSTSK DKEYPFFFAE SANSHSGLQA GRANLEGEDQ TAATLLRKRK MPIHNNMELG QFLWQDERTL NRFPGQMKRP EKASAAVYDK GGNFVP
001: MPRPGPRPYE CVKRAWHSDR HQPIRGSIIR QIFRLAMEAH SAATRKNKEW QEKLPVVVLK AEEIMYSKAN SEEEYTDADT MWNRVNDAID TIIRRDESTE
101: TGPLLPPCVE AALNLGCIAV RASRSQRHSS GRTYLGPKIQ EPVSASTNEP SYHHEYRQQA QQSSTKPSQT VQAAVPVDVL DNSNKRVATP RGYPFLHESM
201: QMHQKPLAIR QGTGPASAPA PAPVNLGSVY PLYYEGNNQT QQADMSFRVP EAPIIIGMPI GIKPSEEATE RVCDLSLRLG ISSEPSTRID VGSSRAYPGR
301: NQEELCLFAE VKKNDRFEWF SNSEGQNSDS RVKKHRTLCG DFL
101: TGPLLPPCVE AALNLGCIAV RASRSQRHSS GRTYLGPKIQ EPVSASTNEP SYHHEYRQQA QQSSTKPSQT VQAAVPVDVL DNSNKRVATP RGYPFLHESM
201: QMHQKPLAIR QGTGPASAPA PAPVNLGSVY PLYYEGNNQT QQADMSFRVP EAPIIIGMPI GIKPSEEATE RVCDLSLRLG ISSEPSTRID VGSSRAYPGR
301: NQEELCLFAE VKKNDRFEWF SNSEGQNSDS RVKKHRTLCG DFL
Arabidopsis Description
Uncharacterized protein At3g24150 [Source:UniProtKB/TrEMBL;Acc:Q0WQ76]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.