Subcellular Localization
min:
: max
Winner_takes_all: nucleus, mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH20129 | Soybean | mitochondrion, nucleus | 84.6 | 88.59 |
| KRH54950 | Soybean | nucleus | 50.47 | 63.2 |
| VIT_11s0016g05510.t01 | Wine grape | nucleus | 38.39 | 48.07 |
| CDX85164 | Canola | nucleus | 36.02 | 47.06 |
| Bra015008.1-P | Field mustard | nucleus | 35.78 | 46.75 |
| CDX77461 | Canola | nucleus | 35.78 | 46.75 |
| Bra028356.1-P | Field mustard | nucleus | 35.55 | 45.59 |
| CDY18077 | Canola | nucleus | 35.55 | 45.59 |
| AT3G24150.1 | Thale cress | nucleus | 36.97 | 45.48 |
| KRH61761 | Soybean | nucleus | 29.15 | 44.73 |
| CDY45344 | Canola | nucleus | 24.64 | 43.51 |
| KRH52430 | Soybean | nucleus | 28.2 | 42.96 |
| PGSC0003DMT400079381 | Potato | nucleus | 42.65 | 37.42 |
| GSMUA_Achr11P... | Banana | nucleus | 33.65 | 37.17 |
| Solyc07g008100.2.1 | Tomato | nucleus | 42.42 | 36.09 |
| GSMUA_Achr6P20490_001 | Banana | mitochondrion | 31.99 | 35.71 |
Protein Annotations
| EMBL:ACUP02010356 | EnsemblPlants:KRH03673 | EnsemblPlantsGene:GLYMA_17G112800 | Gene3D:1.10.246.20 | PANTHER:PTHR35300 | PANTHER:PTHR35300:SF2 |
| ProteinID:KRH03673 | ProteinID:KRH03673.1 | SEG:seg | UniParc:UPI0006EE1686 | UniProt:A0A0R0FKW3 | MapMan:15.5.53.5.2 |
Description
hypothetical protein
Coordinates
chr17:+:8907367..8911218
Molecular Weight (calculated)
47047.2 Da
IEP (calculated)
7.679
GRAVY (calculated)
-0.711
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MPRPGPRPYE CVRRAWHSER HQPVRGSIIQ QIFRVVNDAH SPATKKNKEW QEKLPVVVLK AEEIMYSKAN SEAEYLNPDT LWDRLNDAVN TIIRRDETTE
101: TGGLLPPCVE AALNLGCKAV RTSRSDRHNN PRTYLSPRIQ QPPCLPPKPV AGNPLNYAKV TTPAVSPIPV PDSIHPNSRL MGSSKYPFSE GIPSGHHQPL
201: TMEARPSLNL GSVYPLYYGY EAREPEPWTT ATDTTCSDTI FVGRPVISVP EPSGIGLSEN FSYGTFHHVA NRMRKETAVG TQEAAPDREC DLSLRLGQCL
301: HPCSSSKSSS AYEVDDVGLG VSPESCKFSH LSLQRNREFC FYPRETGYGT IESTSGKCNV EGEDLNLEAT LRKRKAPLCG NNEEDGQFCR NPGVPSNRFT
401: SRPERRNEGD IVAYHKQSVH QH
101: TGGLLPPCVE AALNLGCKAV RTSRSDRHNN PRTYLSPRIQ QPPCLPPKPV AGNPLNYAKV TTPAVSPIPV PDSIHPNSRL MGSSKYPFSE GIPSGHHQPL
201: TMEARPSLNL GSVYPLYYGY EAREPEPWTT ATDTTCSDTI FVGRPVISVP EPSGIGLSEN FSYGTFHHVA NRMRKETAVG TQEAAPDREC DLSLRLGQCL
301: HPCSSSKSSS AYEVDDVGLG VSPESCKFSH LSLQRNREFC FYPRETGYGT IESTSGKCNV EGEDLNLEAT LRKRKAPLCG NNEEDGQFCR NPGVPSNRFT
401: SRPERRNEGD IVAYHKQSVH QH
001: MPRPGPRPYE CVKRAWHSDR HQPIRGSIIR QIFRLAMEAH SAATRKNKEW QEKLPVVVLK AEEIMYSKAN SEEEYTDADT MWNRVNDAID TIIRRDESTE
101: TGPLLPPCVE AALNLGCIAV RASRSQRHSS GRTYLGPKIQ EPVSASTNEP SYHHEYRQQA QQSSTKPSQT VQAAVPVDVL DNSNKRVATP RGYPFLHESM
201: QMHQKPLAIR QGTGPASAPA PAPVNLGSVY PLYYEGNNQT QQADMSFRVP EAPIIIGMPI GIKPSEEATE RVCDLSLRLG ISSEPSTRID VGSSRAYPGR
301: NQEELCLFAE VKKNDRFEWF SNSEGQNSDS RVKKHRTLCG DFL
101: TGPLLPPCVE AALNLGCIAV RASRSQRHSS GRTYLGPKIQ EPVSASTNEP SYHHEYRQQA QQSSTKPSQT VQAAVPVDVL DNSNKRVATP RGYPFLHESM
201: QMHQKPLAIR QGTGPASAPA PAPVNLGSVY PLYYEGNNQT QQADMSFRVP EAPIIIGMPI GIKPSEEATE RVCDLSLRLG ISSEPSTRID VGSSRAYPGR
301: NQEELCLFAE VKKNDRFEWF SNSEGQNSDS RVKKHRTLCG DFL
Arabidopsis Description
Uncharacterized protein At3g24150 [Source:UniProtKB/TrEMBL;Acc:Q0WQ76]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.