Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400067294 | Potato | nucleus | 95.9 | 95.9 |
| VIT_12s0059g02650.t01 | Wine grape | nucleus | 65.98 | 67.08 |
| Solyc10g006510.2.1 | Tomato | nucleus | 52.05 | 54.98 |
| Solyc07g064040.2.1 | Tomato | nucleus | 52.46 | 54.94 |
| KRH26841 | Soybean | nucleus | 50.41 | 54.91 |
| KRH22510 | Soybean | nucleus | 51.64 | 54.55 |
| Solyc02g079970.2.1 | Tomato | nucleus | 49.18 | 52.17 |
| Solyc09g089870.2.1 | Tomato | nucleus | 39.75 | 42.92 |
| Solyc01g111130.2.1 | Tomato | nucleus | 24.59 | 18.02 |
Protein Annotations
| EnsemblPlants:Solyc07g052670.2.1 | EnsemblPlantsGene:Solyc07g052670.2 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | ncoils:Coil |
| PANTHER:PTHR23042 | PANTHER:PTHR23042:SF78 | PFAM:PF00010 | PFscan:PS50888 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000276BA23 | UniProt:K4CFG6 | MapMan:15.5.32 | MapMan:25.4.1.2 | : | : |
Description
No Description!
Coordinates
chr7:-:61115970..61120548
Molecular Weight (calculated)
27353.4 Da
IEP (calculated)
5.508
GRAVY (calculated)
-0.578
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVDSSGNPN WLFDYELMTD ITSAASVTVA EFQSPATIDF SWPAQTIYAS SNLITETDYT FADSEVSKEA SSRKRLKSEC CSSPRSKACR EKLRRDRLNE
101: RFLALSSVLD PGRPPKTEKV AILSDAQRML IELRTETQKL KESNEELQEK IKELKAEKNE LRDEKQRLKE EKDNLEQQVK SLASKAGFLS HPSAMGAAFT
201: AQGQVAAGNK LMPFIGYPSV AMWQFMQPAV VDTSQDHVLR PPVA
101: RFLALSSVLD PGRPPKTEKV AILSDAQRML IELRTETQKL KESNEELQEK IKELKAEKNE LRDEKQRLKE EKDNLEQQVK SLASKAGFLS HPSAMGAAFT
201: AQGQVAAGNK LMPFIGYPSV AMWQFMQPAV VDTSQDHVLR PPVA
001: MVSPENANWI CDLIDADYGS FTIQGPGFSW PVQQPIGVSS NSSAGVDGSA GNSEASKEPG SKKRGRCESS SATSSKACRE KQRRDRLNDK FMELGAILEP
101: GNPPKTDKAA ILVDAVRMVT QLRGEAQKLK DSNSSLQDKI KELKTEKNEL RDEKQRLKTE KEKLEQQLKA MNAPQPSFFP APPMMPTAFA SAQGQAPGNK
201: MVPIISYPGV AMWQFMPPAS VDTSQDHVLR PPVA
101: GNPPKTDKAA ILVDAVRMVT QLRGEAQKLK DSNSSLQDKI KELKTEKNEL RDEKQRLKTE KEKLEQQLKA MNAPQPSFFP APPMMPTAFA SAQGQAPGNK
201: MVPIISYPGV AMWQFMPPAS VDTSQDHVLR PPVA
Arabidopsis Description
ILR3Transcription factor ILR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH37]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.