Factsheet for Solyc01g111130.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400004039	Potato	nucleus	96.7	96.41
KRH13089	Soybean	nucleus	53.75	63.7
KRH24147	Soybean	nucleus	52.25	63.27
VIT_03s0038g01790.t01	Wine grape	nucleus	60.66	61.4
Bra011658.1-P	Field mustard	cytosol	15.32	60.71
KRH43415	Soybean	nucleus	49.25	57.95
EES03283	Sorghum	nucleus	46.55	49.05
Zm00001d044216_P002	Maize	nucleus, plastid	45.35	47.78
Os02t0433600-01	Rice	nucleus	48.65	47.23
Bra017745.1-P	Field mustard	nucleus	34.53	46.94
CDX72574	Canola	nucleus	34.23	46.53
CDY47051	Canola	nucleus	33.33	45.31
TraesCS6B01G220300.1	Wheat	nucleus	40.24	44.97
TraesCS6A01G204300.1	Wheat	nucleus	43.24	44.58
CDY68426	Canola	nucleus	33.33	43.7
TraesCS6D01G185100.1	Wheat	cytosol	41.74	43.03
AT4G36060.3	Thale cress	nucleus, plastid	30.63	35.54
Solyc07g064040.2.1	Tomato	nucleus	20.72	29.61
Solyc10g006510.2.1	Tomato	nucleus	19.82	28.57
Solyc02g079970.2.1	Tomato	nucleus	18.92	27.39
Solyc09g089870.2.1	Tomato	nucleus	18.32	26.99
Solyc07g052670.2.1	Tomato	nucleus	18.02	24.59

Protein Annotations

MapMan:15.5.32	MapMan:25.4.1.4	Gene3D:4.10.280.10	ncoils:Coil	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0043565	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	UniProt:K4B3X6	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR23042
PANTHER:PTHR23042:SF59	SMART:SM00353	SUPFAM:SSF47459	EnsemblPlantsGene:Solyc01g111130.2	EnsemblPlants:Solyc01g111130.2.1	UniParc:UPI000276753E
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

Transcription factor bHLH121 [Source:Projected from Arabidopsis thaliana (AT3G19860) UniProtKB/Swiss-Prot;Acc:Q9LT23]

Coordinates

chr1:-:97501203..97505146

Molecular Weight (calculated)

37203.5 Da

IEP (calculated)

6.729

GRAVY (calculated)

-0.964

Length

333 amino acids

Sequence
(BLAST)

001: MDQFNHGGLY QSNQLPNHCL TELNQLPSDV STPPNGLLSE SSKQKPEAEL KDSIAARKVQ KADREKLRRD RLNEQFMELG KTLDPDRPKN DKASILSDTV
101: QILKDLTAQV SRLKSEYAAL TDESRELTQE KNDLREEKAS LKSDIESLNA QYQQRMRTMY PWAGMDHSMV MHPPSYPYPM PVPIPTGPVP MHPPLQPYPF
201: FGNHNPAVVP NPSSFVQYMT PNTLIEQQPT QYMSPIIQPG SMTRQESRNK SSDQGESRIE KSEDSNEVAT DLELKTPGST SEQDLSSGQK KSRKLPRKDN
301: SFTDGSSSSK CSSSHSVHAV SSNSVVRGTK TGD

Best Arabidopsis Sequence Match ( AT3G19860.3 )
(BLAST)

001: MVELDTKICL RVGLQYDLLS LFDVLVAEEE VMDVSARKSQ KAGREKLRRE KLNEHFVELG NVLDPERPKN DKATILTDTV QLLKELTSEV NKLKSEYTAL
101: TDESRELTQE KNDLREEKTS LKSDIENLNL QYQQRLRSMS PWGAAMDHTV MMAPPPSFPY PMPIAMPPGS IPMHPSMPSY TYFGNQNPSM IPAPCPTYMP
201: YMPPNTVVEQ QSVHIPQNPG NRSREPRAKV SRESRSEKAE DSNEVATQLE LKTPGSTSDK DTLQRPEKTK RCKRNNNNNS IEESSHSSKC SSSPSVRDHS
301: SSSSVAGGQK PDDAK

Arabidopsis Description

BHLH121Transcription factor bHLH121 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT23]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.