Factsheet for Zm00001d044216_P002

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES03283	Sorghum	nucleus	94.3	94.3
TraesCS6A01G204300.1	Wheat	nucleus	67.72	66.25
Os02t0433600-01	Rice	nucleus	71.52	65.89
TraesCS6D01G185100.1	Wheat	cytosol	64.24	62.85
TraesCS6B01G220300.1	Wheat	nucleus	59.18	62.75
Bra011658.1-P	Field mustard	cytosol	15.51	58.33
KRH13089	Soybean	nucleus	44.62	50.18
KRH24147	Soybean	nucleus	42.72	49.09
KRH43415	Soybean	nucleus	43.04	48.06
VIT_03s0038g01790.t01	Wine grape	nucleus	49.05	47.11
Solyc01g111130.2.1	Tomato	nucleus	47.78	45.35
PGSC0003DMT400004039	Potato	nucleus	47.78	45.21
CDX72574	Canola	nucleus	32.59	42.04
Bra017745.1-P	Field mustard	nucleus	31.96	41.22
Zm00001d027911_P001	Maize	mitochondrion	12.34	41.05
CDY47051	Canola	nucleus	31.01	40.0
CDY68426	Canola	nucleus	29.43	36.61
AT4G36060.3	Thale cress	nucleus, plastid	29.43	32.4
Zm00001d054038_P003	Maize	nucleus	19.62	26.72
Zm00001d024679_P002	Maize	nucleus	21.2	26.07
Zm00001d014995_P001	Maize	nucleus	19.3	25.85
Zm00001d021701_P002	Maize	nucleus	19.94	25.0
Zm00001d038357_P001	Maize	cytosol, nucleus, plastid	20.89	23.16
Zm00001d046173_P001	Maize	nucleus	12.03	22.75
Zm00001d046571_P001	Maize	cytosol	15.19	22.54
Zm00001d049384_P001	Maize	cytosol	14.87	22.07

Protein Annotations

EntrezGene:100286079	MapMan:15.5.32	MapMan:25.4.1.4	Gene3D:4.10.280.10	UniProt:B6UE48	EMBL:BT068946
ncoils:Coil	EMBL:EU975513	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	EMBL:HQ858787	InterPro:IPR011598	InterPro:IPR036638
ProteinID:ONM40455.1	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR23042	PANTHER:PTHR23042:SF59	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI000182FA2A	EnsemblPlantsGene:Zm00001d044216	EnsemblPlants:Zm00001d044216_P002	EnsemblPlants:Zm00001d044216_T002	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

bHLH-transcription factor 166Transcription factor bHLH121

Coordinates

chr3:+:222090042..222095901

Molecular Weight (calculated)

34622.1 Da

IEP (calculated)

6.662

GRAVY (calculated)

-0.865

Length

316 amino acids

Sequence
(BLAST)

001: MSSSGPLPAT GTHHGSQRAE CKSQGSTSAR KVQKADREKM RRDKLNEQFQ DLGNALDPDR PRNDKATILG DTIQMLKDLT TQVNKLKAEY TSLSEEACEL
101: TQEKNELRDE KASLKSEVDN LNNQYQQRMR VLYPWVGMEP SVVMGPPPAY PYPVPVPIPS GAVPMHPQLQ TYHFFHSQAS GTIQNTCIPY MAYTQPCHPP
201: TDQPSNQLNT PVAHSSSHRS NSPAQDCRSK SSTLQQPSCG VRSSDAGDIA TDLELKTPGS SCQSHAEIAY NDSSSDLKTK KHCIKQINDC TLTESSSSSR
301: CSSNGPPDVS NSAIDE

Best Arabidopsis Sequence Match ( AT3G19860.1 )
(BLAST)

001: MDVSARKSQK AGREKLRREK LNEHFVELGN VLDPERPKND KATILTDTVQ LLKELTSEVN KLKSEYTALT DESRELTQEK NDLREEKTSL KSDIENLNLQ
101: YQQRLRSMSP WGAAMDHTVM MAPPPSFPYP MPIAMPPGSI PMHPSMPSYT YFGNQNPSMI PAPCPTYMPY MPPNTVVEQQ SVHIPQNPGN RSREPRAKVS
201: RESRSEKAED SNEVATQLEL KTPGSTSDKD TLQRPEKTKR CKRNNNNNSI EESSHSSKCS SSPSVRDHSS SSSVAGGQKP DDAK

Arabidopsis Description

BHLH121Transcription factor bHLH121 [Source:UniProtKB/Swiss-Prot;Acc:Q9LT23]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.