Factsheet for Zm00001d046571_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d049384_P001	Maize	cytosol	98.12	98.12
Zm00001d027911_P001	Maize	mitochondrion	33.33	74.74
KXG24376	Sorghum	nucleus	76.53	65.2
Zm00001d024679_P002	Maize	nucleus	76.53	63.42
TraesCS7D01G304500.1	Wheat	nucleus	62.91	55.83
TraesCS7A01G307700.1	Wheat	nucleus	61.97	55.0
TraesCS7B01G208000.1	Wheat	nucleus	61.97	55.0
Os08t0138500-01	Rice	nucleus	63.85	53.75
HORVU7Hr1G073310.5	Barley	cytosol	61.03	52.63
GSMUA_Achr10P...	Banana	cytosol	28.64	47.66
Zm00001d046173_P001	Maize	nucleus	36.62	46.71
GSMUA_Achr3P23080_001	Banana	nucleus	44.6	41.3
GSMUA_Achr8P33180_001	Banana	nucleus	41.31	38.94
Zm00001d021701_P002	Maize	nucleus	41.78	35.32
GSMUA_Achr11P...	Banana	cytosol	28.17	32.79
Zm00001d054038_P003	Maize	nucleus	34.27	31.47
Zm00001d014995_P001	Maize	nucleus	33.8	30.51
Zm00001d038357_P001	Maize	cytosol, nucleus, plastid	35.21	26.32
Zm00001d044216_P002	Maize	nucleus, plastid	22.54	15.19

Protein Annotations

EnsemblPlants:Zm00001d046571_P001	EnsemblPlants:Zm00001d046571_T001	EnsemblPlantsGene:Zm00001d046571	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0003676
GO:GO:0003677	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR036638
ncoils:Coil	PANTHER:PTHR23042	PANTHER:PTHR23042:SF60	ProteinID:AQL04547.1	SUPFAM:SSF47459	UniParc:UPI000220D686
UniProt:K7VF33	MapMan:15.5.32	MapMan:25.4.1.2	:	:	:

Description

Putative HLH DNA-binding domain superfamily protein

Coordinates

chr9:+:96437176..96440002

Molecular Weight (calculated)

24093.1 Da

IEP (calculated)

5.319

GRAVY (calculated)

-0.409

Length

213 amino acids

Sequence
(BLAST)

001: MTLDAHYLRG SMAAIYSLLK HASCPESLFF HFMPATQLME DCVTSPDVNV EVGSYVNTND VFKEPNDVFK EPGSNKRFLE LGSTLEPGKP VKADKVAILS
101: DATLMVIQLR SEAQQLKETN GSLEENIKEL KAEKDELRDE KQKLKLENES LEHQMKLMTS TPTYMPHPTL MPVPFPQAPL APFHAQGQAT WQKLMMPFVS
201: YPGYPMWQFM PPS

Best Arabidopsis Sequence Match ( AT5G54680.1 )
(BLAST)

001: MVSPENANWI CDLIDADYGS FTIQGPGFSW PVQQPIGVSS NSSAGVDGSA GNSEASKEPG SKKRGRCESS SATSSKACRE KQRRDRLNDK FMELGAILEP
101: GNPPKTDKAA ILVDAVRMVT QLRGEAQKLK DSNSSLQDKI KELKTEKNEL RDEKQRLKTE KEKLEQQLKA MNAPQPSFFP APPMMPTAFA SAQGQAPGNK
201: MVPIISYPGV AMWQFMPPAS VDTSQDHVLR PPVA

Arabidopsis Description

ILR3Transcription factor ILR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH37]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.