Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046571_P001 | Maize | cytosol | 98.12 | 98.12 |
| Zm00001d027911_P001 | Maize | mitochondrion | 32.86 | 73.68 |
| KXG24376 | Sorghum | nucleus | 76.06 | 64.8 |
| Zm00001d024679_P002 | Maize | nucleus | 76.06 | 63.03 |
| TraesCS7D01G304500.1 | Wheat | nucleus | 62.91 | 55.83 |
| TraesCS7A01G307700.1 | Wheat | nucleus | 61.97 | 55.0 |
| TraesCS7B01G208000.1 | Wheat | nucleus | 61.97 | 55.0 |
| Os08t0138500-01 | Rice | nucleus | 63.85 | 53.75 |
| HORVU7Hr1G073310.5 | Barley | cytosol | 61.03 | 52.63 |
| GSMUA_Achr10P... | Banana | cytosol | 28.64 | 47.66 |
| Zm00001d046173_P001 | Maize | nucleus | 36.62 | 46.71 |
| GSMUA_Achr3P23080_001 | Banana | nucleus | 44.6 | 41.3 |
| GSMUA_Achr8P33180_001 | Banana | nucleus | 40.85 | 38.5 |
| Zm00001d021701_P002 | Maize | nucleus | 40.85 | 34.52 |
| GSMUA_Achr11P... | Banana | cytosol | 28.64 | 33.33 |
| Zm00001d054038_P003 | Maize | nucleus | 33.33 | 30.6 |
| Zm00001d014995_P001 | Maize | nucleus | 32.86 | 29.66 |
| Zm00001d038357_P001 | Maize | cytosol, nucleus, plastid | 34.74 | 25.96 |
| Zm00001d044216_P002 | Maize | nucleus, plastid | 22.07 | 14.87 |
Protein Annotations
| EnsemblPlants:Zm00001d049384_P001 | EnsemblPlants:Zm00001d049384_T001 | EnsemblPlantsGene:Zm00001d049384 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR036638 | ncoils:Coil | PANTHER:PTHR23042 |
| PANTHER:PTHR23042:SF60 | ProteinID:AQK50229.1 | SEG:seg | UniParc:UPI000220E1A6 | UniProt:A0A1D6PUC8 | MapMan:15.5.32 |
| MapMan:25.4.1.2 | : | : | : | : | : |
Description
Transcription factor ILR3
Coordinates
chr4:-:28588202..28591027
Molecular Weight (calculated)
24148.4 Da
IEP (calculated)
6.246
GRAVY (calculated)
-0.366
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLDAHYLRG SMAAIYSLLK HASCPESLFF HFMLATQLME DCVTSPDVNV EVGSYVNTND VFKEPNDVFK EPGSNKRFLE LGSTLEPGKP VKADKVAILS
101: DATLMVIQLR LEAQQLKETN GSLEEKIKEL KAKKDELRDE KQKLKLENES LEHQMKLMTS TPTYMPHPTL MPVPFPQAPL APFHAQGQAT WQKLMMPFVS
201: YPGYPMWQFM PPS
101: DATLMVIQLR LEAQQLKETN GSLEEKIKEL KAKKDELRDE KQKLKLENES LEHQMKLMTS TPTYMPHPTL MPVPFPQAPL APFHAQGQAT WQKLMMPFVS
201: YPGYPMWQFM PPS
001: MVSPENANWI CDLIDADYGS FTIQGPGFSW PVQQPIGVSS NSSAGVDGSA GNSEASKEPG SKKRGRCESS SATSSKACRE KQRRDRLNDK FMELGAILEP
101: GNPPKTDKAA ILVDAVRMVT QLRGEAQKLK DSNSSLQDKI KELKTEKNEL RDEKQRLKTE KEKLEQQLKA MNAPQPSFFP APPMMPTAFA SAQGQAPGNK
201: MVPIISYPGV AMWQFMPPAS VDTSQDHVLR PPVA
101: GNPPKTDKAA ILVDAVRMVT QLRGEAQKLK DSNSSLQDKI KELKTEKNEL RDEKQRLKTE KEKLEQQLKA MNAPQPSFFP APPMMPTAFA SAQGQAPGNK
201: MVPIISYPGV AMWQFMPPAS VDTSQDHVLR PPVA
Arabidopsis Description
ILR3Transcription factor ILR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH37]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.