Factsheet for Zm00001d024679_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24376	Sorghum	nucleus	95.33	98.0
Zm00001d027911_P001	Maize	mitochondrion	32.3	87.37
TraesCS7D01G304500.1	Wheat	nucleus	78.99	84.58
TraesCS7A01G307700.1	Wheat	nucleus	78.21	83.75
TraesCS7B01G208000.1	Wheat	nucleus	78.21	83.75
Os08t0138500-01	Rice	nucleus	80.93	82.21
Zm00001d046173_P001	Maize	nucleus	51.36	79.04
Zm00001d046571_P001	Maize	cytosol	63.42	76.53
HORVU7Hr1G073310.5	Barley	cytosol	73.54	76.52
Zm00001d049384_P001	Maize	cytosol	63.03	76.06
GSMUA_Achr10P...	Banana	cytosol	32.3	64.84
GSMUA_Achr3P23080_001	Banana	nucleus	52.14	58.26
GSMUA_Achr8P33180_001	Banana	nucleus	47.08	53.54
Zm00001d021701_P002	Maize	nucleus	50.58	51.59
GSMUA_Achr11P...	Banana	cytosol	33.07	46.45
Zm00001d054038_P003	Maize	nucleus	41.25	45.69
Zm00001d014995_P001	Maize	nucleus	41.25	44.92
Zm00001d038357_P001	Maize	cytosol, nucleus, plastid	40.08	36.14
Zm00001d044216_P002	Maize	nucleus, plastid	26.07	21.2

Protein Annotations

MapMan:15.5.32	MapMan:25.4.1.2	Gene3D:4.10.280.10	ProteinID:AQK41734.1	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638
UniProt:K7TR69	PFAM:PF00010	PFscan:PS50888	PANTHER:PTHR23042	PANTHER:PTHR23042:SF60	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI00022173F1	EnsemblPlantsGene:Zm00001d024679	EnsemblPlants:Zm00001d024679_P002	EnsemblPlants:Zm00001d024679_T002	InterPro:bHLH_dom
SEG:seg	:	:	:	:	:

Description

bHLH-transcription factor 172Transcription factor ILR3

Coordinates

chr10:+:83443922..83447138

Molecular Weight (calculated)

28180.4 Da

IEP (calculated)

5.050

GRAVY (calculated)

-0.632

Length

257 amino acids

Sequence
(BLAST)

001: MSLAPDPADG GAGTGTGDDW FLDCGILDDL PAAACGAFPW DASPSSSNPS VEVGSYVNTN DVFKEPNDVF KEPGSNKRLR SGFNDVHVPT SKASREKMRR
101: NKLNDRFLEL GSTLEPGKPV KADKAAILSD ATRMVIQLRS EAQQLKETNG SLEEKIKELK AEKDELRDEK QKLKLEKESL EHQMKLMTST PTYMPHPTLM
201: PAPFPQAPLA PFHAQGQAAG QKLMMPFVSY PGYPMWQFMP PSEVDTSKDS EACPPVA

Best Arabidopsis Sequence Match ( AT5G54680.1 )
(BLAST)

001: MVSPENANWI CDLIDADYGS FTIQGPGFSW PVQQPIGVSS NSSAGVDGSA GNSEASKEPG SKKRGRCESS SATSSKACRE KQRRDRLNDK FMELGAILEP
101: GNPPKTDKAA ILVDAVRMVT QLRGEAQKLK DSNSSLQDKI KELKTEKNEL RDEKQRLKTE KEKLEQQLKA MNAPQPSFFP APPMMPTAFA SAQGQAPGNK
201: MVPIISYPGV AMWQFMPPAS VDTSQDHVLR PPVA

Arabidopsis Description

ILR3Transcription factor ILR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH37]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.