Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99495 | Sorghum | nucleus | 94.05 | 93.31 |
| Os07t0543000-01 | Rice | nucleus | 79.76 | 78.52 |
| TraesCS2D01G221200.1 | Wheat | nucleus | 76.98 | 77.29 |
| TraesCS2A01G215600.1 | Wheat | nucleus | 76.19 | 76.49 |
| TraesCS2B01G240600.1 | Wheat | nucleus | 76.19 | 76.49 |
| HORVU2Hr1G044230.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 76.19 | 65.31 |
| Zm00001d027911_P001 | Maize | mitochondrion | 24.21 | 64.21 |
| Zm00001d024679_P002 | Maize | nucleus | 51.59 | 50.58 |
| Zm00001d046173_P001 | Maize | nucleus | 28.57 | 43.11 |
| Zm00001d014995_P001 | Maize | nucleus | 39.68 | 42.37 |
| Zm00001d054038_P003 | Maize | nucleus | 38.49 | 41.81 |
| Zm00001d046571_P001 | Maize | cytosol | 35.32 | 41.78 |
| Zm00001d049384_P001 | Maize | cytosol | 34.52 | 40.85 |
| Zm00001d038357_P001 | Maize | cytosol, nucleus, plastid | 42.46 | 37.54 |
| Zm00001d044216_P002 | Maize | nucleus, plastid | 25.0 | 19.94 |
Protein Annotations
| EntrezGene:100273838 | MapMan:15.5.32 | MapMan:25.4.1.2 | Gene3D:4.10.280.10 | ncoils:Coil | UniProt:F1DJQ7 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | EMBL:HQ858665 |
| InterPro:IPR011598 | InterPro:IPR036638 | ProteinID:ONM58055.1 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 |
| PANTHER:PTHR23042:SF78 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0001B36D82 | EnsemblPlantsGene:Zm00001d021701 | EnsemblPlants:Zm00001d021701_P002 |
| EnsemblPlants:Zm00001d021701_T002 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
bHLH-transcription factor 164Transcription factor ILR3
Coordinates
chr7:-:160737172..160741135
Molecular Weight (calculated)
27568.9 Da
IEP (calculated)
6.299
GRAVY (calculated)
-0.554
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPEGTTWV FDCPLMDDLA VAADFAAAPA GGFFWAAPPS LQPQAPVQSV VAASAPNPCM EISSSVDCGQ EKEQPTNKRP RSESTTESST KASREKIRRD
101: KLNERFLELG AILEPGKTPK MDKTAILSDA IRVVGELRSE AKKLKDSNEN LQEKIKELKA EKNELRDEKQ RLKAEKESLE QQIKFLNARP SLVPHHPVIP
201: ASAFPAPQGP AAAARHKLMM PVIGYPGFPM WQFMPPSDVD TSDDPRSCPP VA
101: KLNERFLELG AILEPGKTPK MDKTAILSDA IRVVGELRSE AKKLKDSNEN LQEKIKELKA EKNELRDEKQ RLKAEKESLE QQIKFLNARP SLVPHHPVIP
201: ASAFPAPQGP AAAARHKLMM PVIGYPGFPM WQFMPPSDVD TSDDPRSCPP VA
001: MVSPENANWI CDLIDADYGS FTIQGPGFSW PVQQPIGVSS NSSAGVDGSA GNSEASKEPG SKKRGRCESS SATSSKACRE KQRRDRLNDK FMELGAILEP
101: GNPPKTDKAA ILVDAVRMVT QLRGEAQKLK DSNSSLQDKI KELKTEKNEL RDEKQRLKTE KEKLEQQLKA MNAPQPSFFP APPMMPTAFA SAQGQAPGNK
201: MVPIISYPGV AMWQFMPPAS VDTSQDHVLR PPVA
101: GNPPKTDKAA ILVDAVRMVT QLRGEAQKLK DSNSSLQDKI KELKTEKNEL RDEKQRLKTE KEKLEQQLKA MNAPQPSFFP APPMMPTAFA SAQGQAPGNK
201: MVPIISYPGV AMWQFMPPAS VDTSQDHVLR PPVA
Arabidopsis Description
ILR3Transcription factor ILR3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FH37]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.