Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG29296 | Sorghum | cytosol, mitochondrion, nucleus | 92.8 | 94.81 |
| Zm00001d054038_P003 | Maize | nucleus | 91.1 | 92.67 |
| Os02t0116600-01 | Rice | cytosol | 75.85 | 75.85 |
| TraesCS6D01G051600.2 | Wheat | nucleus | 73.73 | 70.16 |
| TraesCS6B01G060700.2 | Wheat | nucleus | 72.46 | 68.95 |
| TraesCS6A01G045100.1 | Wheat | nucleus | 64.83 | 63.22 |
| GSMUA_Achr4P05310_001 | Banana | nucleus | 56.36 | 58.08 |
| GSMUA_Achr4P05280_001 | Banana | nucleus | 56.36 | 58.08 |
| GSMUA_Achr7P04180_001 | Banana | nucleus | 55.51 | 57.96 |
| Zm00001d027911_P001 | Maize | mitochondrion | 22.88 | 56.84 |
| Zm00001d024679_P002 | Maize | nucleus | 44.92 | 41.25 |
| Zm00001d021701_P002 | Maize | nucleus | 42.37 | 39.68 |
| Zm00001d046173_P001 | Maize | nucleus | 26.69 | 37.72 |
| Zm00001d038357_P001 | Maize | cytosol, nucleus, plastid | 44.92 | 37.19 |
| Zm00001d046571_P001 | Maize | cytosol | 30.51 | 33.8 |
| Zm00001d049384_P001 | Maize | cytosol | 29.66 | 32.86 |
| Zm00001d044216_P002 | Maize | nucleus, plastid | 25.85 | 19.3 |
Protein Annotations
| EntrezGene:100282509 | EntrezGene:100283701 | MapMan:15.5.32 | MapMan:25.4.1.2 | Gene3D:4.10.280.10 | UniProt:A0A1D6GYM4 |
| ProteinID:AQK67859.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 |
| PANTHER:PTHR23042:SF66 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000842D5F6 | EnsemblPlantsGene:Zm00001d014995 | EnsemblPlants:Zm00001d014995_P001 |
| EnsemblPlants:Zm00001d014995_T001 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
bHLH-transcription factor 129Transcription factor bHLH104
Coordinates
chr5:-:71410131..71412758
Molecular Weight (calculated)
25841.8 Da
IEP (calculated)
5.772
GRAVY (calculated)
-0.680
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDCAGGRDP VEDFLLGGAG AGDDGDLVAV FCDDGGRLGI EGIHGDACGF EQSNLGKRGR DEPCSSGPTS KACREKMRRD KLNDRFLELS SIMNPGKEAK
101: LDKANILSDA ARMVAQLRGE AEKLKESNEK LRENIKDLKE EKNELREEKV RLKVEKDRLE QQVKAMSVAP TGYVPHLPHP ASYHPAAFTP FAPPQQAPAN
201: KSAPIPAPFP GMAMWQWLPP TIVDTTQDPK LWPPNA
101: LDKANILSDA ARMVAQLRGE AEKLKESNEK LRENIKDLKE EKNELREEKV RLKVEKDRLE QQVKAMSVAP TGYVPHLPHP ASYHPAAFTP FAPPQQAPAN
201: KSAPIPAPFP GMAMWQWLPP TIVDTTQDPK LWPPNA
001: MQTNEDNIFQ DFGSCGVNLM QPQQEQFDSF NGNLEQVCSS FRGGNNGVVY SSSIGSAQLD LAASFSGVLQ QETHQVCGFR GQNDDSAVPH LQQQQGQVFS
101: GVVEINSSSS VGAVKEEFEE ECSGKRRRTG SCSKPGTKAC REKLRREKLN DKFMDLSSVL EPGRTPKTDK SAILDDAIRV VNQLRGEAHE LQETNQKLLE
201: EIKSLKADKN ELREEKLVLK AEKEKMEQQL KSMVVPSPGF MPSQHPAAFH SHKMAVAYPY GYYPPNMPMW SPLPPADRDT SRDLKNLPPV A
101: GVVEINSSSS VGAVKEEFEE ECSGKRRRTG SCSKPGTKAC REKLRREKLN DKFMDLSSVL EPGRTPKTDK SAILDDAIRV VNQLRGEAHE LQETNQKLLE
201: EIKSLKADKN ELREEKLVLK AEKEKMEQQL KSMVVPSPGF MPSQHPAAFH SHKMAVAYPY GYYPPNMPMW SPLPPADRDT SRDLKNLPPV A
Arabidopsis Description
BHLH34Transcription factor bHLH34 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTC7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.